| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 888,497 | A→C | intergenic (+143/‑62) | PA14_RS04165 → / → PA14_RS04170 | sigma‑54‑dependent Fis family transcriptional regulator/LysE family translocator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 888,497 | 0 | A | C | 99.8% | 1914.2 / NA | 490 | intergenic (+143/‑62) | PA14_RS04165/PA14_RS04170 | sigma‑54‑dependent Fis family transcriptional regulator/LysE family translocator |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (248/241); total (249/241) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 502 total aligned reads displayed.
ACTGAGGTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTAAGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCATCGTCG > NC_008463/888350‑888643 | gAGGTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTAcggagg < 2:6389299/150‑1 (MQ=255) tGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAAc > 1:10068139/1‑150 (MQ=255) tGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAAc < 1:5919962/150‑1 (MQ=255) cgcCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAAccc > 1:7816630/1‑150 (MQ=255) ggcggccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgc > 2:1021152/1‑150 (MQ=255) gcggccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcc > 1:5292370/1‑150 (MQ=255) cggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgccc < 1:8956566/150‑1 (MQ=255) cgcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGcccgccccgc < 1:6485794/150‑1 (MQ=255) aGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAcc < 2:4072319/150‑1 (MQ=255) gtcgtcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAcca < 2:8484863/150‑1 (MQ=255) gtcgtcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAcca > 2:10733813/1‑150 (MQ=255) tcgtcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccag < 1:5037052/150‑1 (MQ=255) cgtcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagc < 1:2543150/150‑1 (MQ=255) gtcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagcc < 1:1115254/150‑1 (MQ=255) tcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagcca > 2:1313384/1‑150 (MQ=255) tcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagcca < 1:150171/150‑1 (MQ=255) cAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGAAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagccag > 2:8337515/1‑150 (MQ=255) aGCGCGGAACATCAAACCCAGCCGTGAGCCTTGCCCCGTTACTGCCGGTGGGCTTTCCCTGTCGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCagccagcc < 1:1654632/150‑1 (MQ=255) aGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCagccagcc < 2:4667309/150‑1 (MQ=255) aGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGCAAACCCATGCCCGCCCCGCACCagccagcc > 1:7992507/1‑150 (MQ=255) gcgcGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGccc > 2:10047482/1‑150 (MQ=255) cgGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCa > 2:11078307/1‑150 (MQ=255) cgGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCa > 2:7125814/1‑150 (MQ=255) aaaaTCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAAcc < 2:984357/150‑1 (MQ=255) aaaaTCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAAcc > 1:347200/1‑150 (MQ=255) aaaTCAAAACCCGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAAccc < 1:5565995/150‑1 (MQ=255) aaTCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCg > 1:3919655/1‑150 (MQ=255) aTCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGa < 1:6626440/150‑1 (MQ=255) aaaaCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCa > 2:4284668/1‑150 (MQ=255) aaaCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAg > 1:3406329/1‑150 (MQ=255) aaaCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAg > 2:6745771/1‑150 (MQ=255) aaCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAgg > 2:5413117/1‑150 (MQ=255) aCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAggg > 2:5592681/1‑150 (MQ=255) cAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAg > 2:5314900/1‑150 (MQ=255) cAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAg > 1:8870104/1‑150 (MQ=255) cAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAg > 2:1711466/1‑150 (MQ=255) gCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGtt < 2:9221516/150‑1 (MQ=255) cGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCg < 1:8108108/150‑1 (MQ=255) gTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGa > 1:9781654/1‑150 (MQ=255) tGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGAc > 2:868373/1‑150 (MQ=255) gAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGAcc > 1:6150722/1‑150 (MQ=255) aGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGAccc < 2:10959126/150‑1 (MQ=255) gCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCa > 1:2779677/1‑150 (MQ=255) gCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCa > 2:2600266/1‑150 (MQ=255) ccTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCAt > 1:6248721/1‑150 (MQ=255) ccTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCAt < 1:2981106/150‑1 (MQ=255) cTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATg > 1:8571915/1‑150 (MQ=255) ttGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGc < 1:1886357/150‑1 (MQ=255) tGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGcc < 2:10884723/150‑1 (MQ=255) cccGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCt < 2:1484715/150‑1 (MQ=255) cccGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCt < 2:9654389/150‑1 (MQ=255) cccGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCt < 2:3522852/150‑1 (MQ=255) ccGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTa < 1:1231394/150‑1 (MQ=255) gTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGc > 2:2301248/1‑150 (MQ=255) aaTGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCct > 1:1063158/1‑150 (MQ=255) tGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCctgc > 1:6984123/1‑150 (MQ=255) tGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCctgc > 1:10411042/1‑150 (MQ=255) tGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCctgc > 1:2286256/1‑150 (MQ=255) cGGTGGGCTTTCCCTGTAGCGTTCCGGGCTGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCTTGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGTCCCATGCCGCTAGCCCtgctgc < 2:4542822/150‑1 (MQ=255) ggTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGACACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCtgctgcg > 2:8837369/1‑149 (MQ=255) ggTGGGCTTACCCACAAGCGTTACGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTCGCCCTgctgct > 2:4440826/1‑150 (MQ=255) gggCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGc > 2:3087296/1‑150 (MQ=255) ggCGTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTGCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGcc < 2:6563235/150‑1 (MQ=255) tCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGGTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATggg > 2:8025305/1‑150 (MQ=255) cccTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGgc > 1:677462/1‑150 (MQ=255) ccTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGgcg < 2:10393591/150‑1 (MQ=255) ccTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGgcg > 1:314719/1‑150 (MQ=255) cTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGgcgc < 1:4049983/150‑1 (MQ=255) aGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTtc < 2:2097176/150‑1 (MQ=255) gTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTcc > 2:196932/1‑150 (MQ=255) ttCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTccc > 2:1889724/1‑150 (MQ=255) ttCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTccc > 2:6981852/1‑150 (MQ=255) tCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCt < 2:5155292/150‑1 (MQ=255) ccGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTg < 1:8696326/150‑1 (MQ=255) cGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGa < 1:7448774/150‑1 (MQ=255) aGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTg > 2:7361430/1‑150 (MQ=255) gcgcAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAACCCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGa > 2:4006176/1‑150 (MQ=255) gcAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGAtt > 2:6137237/1‑150 (MQ=255) aCCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTcc < 1:2042302/150‑1 (MQ=255) aCCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTcc > 1:831915/1‑150 (MQ=255) cccGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTccc < 1:10781085/150‑1 (MQ=255) ccGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTcccc < 1:10532755/150‑1 (MQ=255) ttCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccgg < 1:9093611/150‑1 (MQ=255) ttCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccgg > 2:2771240/1‑150 (MQ=255) gTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccg > 1:4663064/1‑150 (MQ=255) tCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccgg < 1:9639360/150‑1 (MQ=255) cgcgCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccggt < 2:3348619/150‑1 (MQ=255) ccccGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAAc > 1:5215390/1‑150 (MQ=255) ccccGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAAc < 2:9478882/150‑1 (MQ=255) cccGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAAcc < 1:2423246/150‑1 (MQ=255) cGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTg < 1:3794654/150‑1 (MQ=255) ccAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGAc > 2:1190621/1‑150 (MQ=255) ccAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGAc > 2:4166734/1‑150 (MQ=255) cAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCTTGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGAcc < 2:9035287/150‑1 (MQ=255) aGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCa < 2:3771210/150‑1 (MQ=255) ggAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAt > 1:5373653/1‑150 (MQ=255) aGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcg < 2:162091/150‑1 (MQ=255) aGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcg < 1:9241466/150‑1 (MQ=255) gCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCCtcgt > 1:3307510/1‑150 (MQ=255) gCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcgt < 2:758073/150‑1 (MQ=255) | ACTGAGGTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTAAGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCATCGTCG > NC_008463/888350‑888643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |