| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 3,150,987 | Δ1 bp | intergenic (‑192/+24) | pvcA ← / ← PA14_RS14420 | paerucumarin biosynthesis protein PvcA/asparaginase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 3,150,985 | 0 | C | . | 99.8% | 2336.7 / ‑2.1 | 473 | intergenic (‑190/+26) | pvcA/PA14_RS14420 | paerucumarin biosynthesis protein PvcA/asparaginase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (277/194); total (279/194) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 506 total aligned reads displayed.
GGCAGCGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGCCCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCATTCCACCA > NC_008463/3150835‑3151131 | ggCAGCGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGc < 2:2329728/151‑1 (MQ=255)ggCAGCGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGc > 1:11318073/1‑151 (MQ=255) gCAGCGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGATGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGcg < 2:2864021/151‑2 (MQ=255) cGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGTTGGGCGCCGGGCACGGGCGGGCCGCCGGCGTGGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGccgccg > 1:2826420/1‑147 (MQ=255) cGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGTCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGccgccg > 2:7426358/1‑147 (MQ=255) cGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGccgccg < 2:9156859/151‑5 (MQ=255) cGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGccgccg < 1:6913051/151‑5 (MQ=255) cGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGccgccg < 1:4179482/151‑5 (MQ=255) cGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTAGCGCGGGGAGCTCGGAAGGAAGCGGccgccg > 2:940405/1‑147 (MQ=255) gAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCcggc > 1:10209593/1‑151 (MQ=255) gAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCcggc > 2:5932022/1‑151 (MQ=255) aaGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCcggcg < 1:10950080/151‑1 (MQ=255) cGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCggcgggcg > 2:620061/1‑151 (MQ=255) aCATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGggcggc > 1:5619620/1‑151 (MQ=255) ctCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGACACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTAGCGCGGGGACCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCg < 2:9556022/150‑1 (MQ=255) aTCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCCCGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCg < 1:9499363/151‑1 (MQ=255) cTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAg > 2:10636597/1‑151 (MQ=255) tgtgGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAgg > 2:1311005/1‑151 (MQ=255) tgtgGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAgg > 1:6241686/1‑151 (MQ=255) gtgGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAggg > 1:3509407/1‑151 (MQ=255) cTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTc > 2:1993053/1‑151 (MQ=255) gccgccGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGt > 1:8796000/1‑151 (MQ=255) ccgccgGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTc > 2:4294597/1‑151 (MQ=255) ccgccgGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTc > 1:6786121/1‑151 (MQ=255) cgccgGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCg < 1:3805257/151‑1 (MQ=255) gccgGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCgg > 2:5121188/1‑151 (MQ=255) gccgGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTAGCGTATAGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCgg > 2:7159447/1‑151 (MQ=255) cgGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCg > 1:8708645/1‑151 (MQ=255) ggATAAACGGGGGACGGCCGGAACCACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCCCGGGCGGGCCGCGGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTtct < 1:320965/151‑1 (MQ=255) gATAACCCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTtctc < 2:2477748/151‑1 (MQ=255) aTAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTcg > 2:1871031/1‑151 (MQ=255) aTAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTcg > 1:10333306/1‑151 (MQ=255) aaCCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTcgccg > 2:1594995/1‑151 (MQ=255) gggAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTGGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAg > 2:8415830/1‑151 (MQ=255) ggAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAgg < 2:884503/151‑1 (MQ=255) aaGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTc > 2:2158457/1‑151 (MQ=255) aGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCg > 1:5324323/1‑151 (MQ=255) ggCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGGTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGa > 1:5814205/1‑151 (MQ=255) ccGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAgg > 2:6470162/1‑151 (MQ=255) ccGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAgg > 1:7838880/1‑151 (MQ=255) gAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGGCGGCGTTCTCGCCGCACAGGTCGAGGGCg > 2:5345851/1‑151 (MQ=255) aaaCACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGa > 2:4862185/1‑151 (MQ=255) aaCACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGaa > 1:1590587/1‑151 (MQ=255) acacTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGCGGCGAGGACGTTCTAGCGGAACGCGGGCAGGTCGGAAGGTAGAGG‑CCGCGGTAGGGCGGCAGCAGGGCGGGCAGTCGGCGTTCACGCCGCGCAGGTCGAGGGCGagc > 2:4566382/1‑149 (MQ=255) cacTGTTCGCGGAAGCTTGACGATGGGCGCCGGGCACGGGGGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAAcc < 1:5891428/151‑1 (MQ=255) cTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAg > 2:1397553/1‑151 (MQ=255) tCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGtt > 2:2996738/1‑151 (MQ=255) gCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTgc < 2:10375917/151‑1 (MQ=255) tGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTgcgc > 1:168217/1‑151 (MQ=255) aGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAGGGAAGCGG‑CCGACGGCGGGCGGCCGCAGGTCGGTCAGTCGGCGTTCTCGACGCACAGGTCGAGGGCGAACCAGCGTTGCGCTtc > 1:8119169/1‑151 (MQ=255) cTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCTCAGGTCGAGGGCGACCCAGCGTTGCGcgtcgt > 1:10083365/1‑151 (MQ=255) cTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTtcgt < 1:2728749/151‑1 (MQ=255) tGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTtcgtcg < 2:827490/151‑1 (MQ=255) tGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGAATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTtcgtcg < 1:6553781/151‑1 (MQ=255) aCGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGGATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGACCCAGCGTGGCGCTTCGTcgcg > 2:3541091/1‑151 (MQ=255) aCGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTAGTCGCGTATCGCGGGGAGCTCGGCAGGAAGCGGCAC‑CCCGCGGGAGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGGACAGGTCGAGGGCGATCCTGCGTTGGGCTTCGTcgcg > 1:4520194/1‑151 (MQ=255) cGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGt < 2:6860690/151‑1 (MQ=255) gggCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGa > 1:11108980/1‑151 (MQ=255) gggCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGa < 1:8856513/151‑1 (MQ=255) gcgcCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAgg < 1:114981/151‑1 (MQ=255) gcgcCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAgg > 1:4741822/1‑151 (MQ=255) cgcCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGc > 2:10787302/1‑151 (MQ=255) cgcCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGc > 2:4976462/1‑151 (MQ=255) gcCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTGGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGGTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGcc > 1:10622144/1‑151 (MQ=255) gcCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGcc < 2:8609009/151‑1 (MQ=255) cGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGGGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCCGGAGGACGCAGGGCGGTCAGTCGGAGTTCTCGCCGCACAGGTCGAGGGCGTACCAGCGTTGCGCTGGGTCGCGTCCGAGGCCgg > 1:4148928/1‑151 (MQ=255) cGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCgg > 1:7513302/1‑151 (MQ=255) gggCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGgc < 1:1358934/151‑1 (MQ=255) gggCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGgc > 2:421196/1‑151 (MQ=255) gggcgggcCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAg > 2:10548605/1‑151 (MQ=255) gggcgggcCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAg > 2:3903701/1‑151 (MQ=255) ggcgggcCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGc < 1:8980590/151‑1 (MQ=255) gggcCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCTGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAgg < 1:916653/151‑1 (MQ=255) gccgccGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGcc < 2:8489192/151‑1 (MQ=255) cgccgGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGGTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGa > 2:7733597/1‑151 (MQ=255) gccgGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGaa > 1:8224251/1‑151 (MQ=255) ccgGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAag > 2:11266058/1‑151 (MQ=255) gCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGc > 1:7691937/1‑151 (MQ=255) cGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCt < 2:3189118/151‑1 (MQ=255) gTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCtt > 1:4787735/1‑151 (MQ=255) gTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCtt < 2:1194967/151‑1 (MQ=255) ttGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTg < 2:4134929/151‑1 (MQ=255) ttGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTg < 1:1938566/151‑1 (MQ=255) gTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGcc > 2:6805396/1‑151 (MQ=255) gcgTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAg > 1:5465868/1‑151 (MQ=255) gTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAggg < 2:10149433/151‑1 (MQ=255) ctCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGgcc < 2:11395465/150‑1 (MQ=255) aTCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGgcc > 2:6098546/1‑151 (MQ=255) cgcgGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGgccgc > 1:7244860/1‑151 (MQ=255) cgGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCt < 1:3008856/151‑1 (MQ=255) ggggAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGACCCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTc > 1:3621972/1‑151 (MQ=255) ggggAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTc < 1:1267168/151‑1 (MQ=255) tCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTc > 2:11086087/1‑151 (MQ=255) gcGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTc < 2:921803/150‑1 (MQ=255) cGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCa > 2:2717802/1‑151 (MQ=255) ggaaggaaGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCAt < 1:9401775/151‑1 (MQ=255) ggaaggaaGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCAt > 2:9783185/1‑151 (MQ=255) aggaagCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCATTcc > 1:2092128/1‑151 (MQ=255) aagCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCATTccacc > 1:2575251/1‑151 (MQ=255) aagCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCATTccacc < 2:7510903/151‑1 (MQ=255) | GGCAGCGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGCCCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCATTCCACCA > NC_008463/3150835‑3151131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |