Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 3,670,543 +A coding (543/1020 nt) PA14_RS16675 → ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084633,670,5421.A99.3% 1757.1 / 2.4 420coding (542/1020 nt)PA14_RS16675ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base . (3/0);  new base A (209/208);  total (212/208)
Fisher's exact test for biased strand distribution p-value = 2.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01

Only 100 of 439 total aligned reads displayed.

GACGTGCTCGCCCGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTTCCTGGAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGTTCCTCCGCGGG  >  NC_008463/3670391‑3670687
                                                                                                                                                        |                                                                                                                                                  
  cGTGCTCGCCCGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGaa                                                                                                                                                  >  1:4089504/1‑150 (MQ=255)
    tGCTCGCCCGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGaagt                                                                                                                                                <  1:11511903/151‑4 (MQ=255)
        cGCCCGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTgg                                                                                                                                            >  1:4566793/1‑151 (MQ=255)
          cccGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTc                                                                                                                                          <  1:3184296/151‑1 (MQ=255)
          cccGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTc                                                                                                                                          <  1:5574993/151‑1 (MQ=255)
          cccGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTc                                                                                                                                          >  1:1093551/1‑151 (MQ=255)
            cGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCgg                                                                                                                                        >  1:3908552/1‑151 (MQ=255)
            cGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCAGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCgg                                                                                                                                        <  2:632168/151‑1 (MQ=255)
             gggTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCggg                                                                                                                                       <  2:9458624/151‑1 (MQ=255)
             gggTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCggg                                                                                                                                       <  2:4475160/151‑1 (MQ=255)
              ggTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCgggg                                                                                                                                      <  2:4873734/151‑1 (MQ=255)
                tGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCt                                                                                                                                    <  1:1330980/151‑1 (MQ=255)
                  aTTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGc                                                                                                                                  <  1:5378526/151‑1 (MQ=255)
                      aCGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGt                                                                                                                              <  1:4695883/151‑1 (MQ=255)
                         gCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGct                                                                                                                           >  1:1879650/1‑151 (MQ=255)
                          cTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGctc                                                                                                                          <  2:4348249/151‑1 (MQ=255)
                           ttCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGctct                                                                                                                         <  1:10024074/151‑1 (MQ=255)
                              cgcgTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTAcc                                                                                                                      >  1:1497592/1‑151 (MQ=255)
                               gcgTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACct                                                                                                                     <  1:6398607/151‑1 (MQ=255)
                                cgTGTCGATCCTCTTCGCCCAGACCCTGACCGTGCTCAGTTATCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGACGTCTGGGCGGGGCTGCCGGTGCTCTACctg                                                                                                                    >  2:3932192/1‑151 (MQ=255)
                                 gtgtCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACctgc                                                                                                                   >  1:7764634/1‑151 (MQ=255)
                                    tCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGa                                                                                                                >  1:11394437/1‑151 (MQ=255)
                                     cGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGat                                                                                                               <  1:7248267/151‑1 (MQ=255)
                                     cGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGat                                                                                                               <  2:5420106/151‑1 (MQ=255)
                                     cGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGat                                                                                                               <  2:7348910/151‑1 (MQ=255)
                                       aTCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGatca                                                                                                             >  2:1077237/1‑151 (MQ=255)
                                       aTCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGatca                                                                                                             >  2:75545/1‑151 (MQ=255)
                                        tCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGatcat                                                                                                            <  1:10158357/151‑1 (MQ=255)
                                            ctTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTg                                                                                                        >  1:6066747/1‑151 (MQ=255)
                                             ttCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTgg                                                                                                       <  2:746745/151‑1 (MQ=255)
                                               cGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTGTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGcc                                                                                                     >  2:8541035/1‑151 (MQ=255)
                                               cGCCCTGACCCGGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGcc                                                                                                     <  2:9324454/151‑1 (MQ=255)
                                                gCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCGCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCa                                                                                                    >  1:10280119/1‑151 (MQ=255)
                                                   ctgaccctgaccGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCt                                                                                                 <  2:3059664/151‑1 (MQ=255)
                                                    tgaccctgaccGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCtt                                                                                                <  2:1914919/151‑1 (MQ=255)
                                                     gaccctgaccGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCAGATCATCCTGGCCAGCtgc                                                                                               >  2:5928601/1‑149 (MQ=255)
                                                        cctgaccGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTc                                                                                            >  2:11514308/1‑151 (MQ=255)
                                                        cctgaccGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGATTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTc                                                                                            >  2:5286219/1‑151 (MQ=255)
                                                         ctgaccGTGCTCAGTTCTCTTATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCTACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTcc                                                                                           >  2:2835711/1‑151 (MQ=255)
                                                         ctgaccGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTcc                                                                                           <  1:8663368/151‑1 (MQ=255)
                                                           gaccGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAg                                                                                         <  2:6452222/151‑1 (MQ=255)
                                                                tGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGaa                                                                                    >  2:10578162/1‑151 (MQ=255)
                                                                 gCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAAc                                                                                   >  2:10190453/1‑151 (MQ=255)
                                                                     aggtctcTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCt                                                                               <  1:4733161/148‑1 (MQ=255)
                                                                     aGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCt                                                                               <  1:9452939/151‑1 (MQ=255)
                                                                     aGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCt                                                                               >  2:8215632/1‑151 (MQ=255)
                                                                           ctGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGgc                                                                         <  2:5821660/151‑1 (MQ=255)
                                                                            tGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGgct                                                                        >  1:6958285/1‑151 (MQ=255)
                                                                            tGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGgct                                                                        <  2:9698119/151‑1 (MQ=255)
                                                                             gATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGgctg                                                                       <  1:2000456/151‑1 (MQ=255)
                                                                              aTCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGgctgc                                                                      >  1:9875755/1‑151 (MQ=255)
                                                                                cGGCGTCACCGTCAGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGctgctg                                                                    >  1:1821990/1‑151 (MQ=255)
                                                                                 ggCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTgg                                                                   >  2:7002520/1‑151 (MQ=255)
                                                                                   cGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGc                                                                 <  1:3509494/151‑1 (MQ=255)
                                                                                   cGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGc                                                                 <  2:2294673/151‑1 (MQ=255)
                                                                                    gTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTCCCTGCTGAACAACCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTgggaa                                                                >  1:2333520/1‑149 (MQ=255)
                                                                                       aCCGTCGGCGCCCTGCAAGGCTACGACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGcatca                                                             <  2:6329466/151‑1 (MQ=255)
                                                                                         cGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCAtg                                                           <  1:800616/151‑1 (MQ=255)
                                                                                         cGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCAtg                                                           <  1:8341709/151‑1 (MQ=255)
                                                                                             ggCGCCCTGCCAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCAtgctgc                                                       >  2:6722564/1‑151 (MQ=255)
                                                                                             ggCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCAtgctgc                                                       >  2:1377908/1‑151 (MQ=255)
                                                                                              gcgcCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATgctgct                                                      >  2:2050776/1‑151 (MQ=255)
                                                                                                gcCCTGCAAGGCTCCTACGGCGGCTGGGTCGACCTGCTCGGCCCGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCGCTAGCTGCTGATCCTCCTGGCCAGCTGCGTCCAGCCGAGCTTCTGGTGGCGGCTGGGCATCAggctgcggg                                                    >  2:8409201/1‑148 (MQ=255)
                                                                                                gcCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGTCCAGCGTTTCCTGGAAGTCTGGTCCGGGCTGCCGGTGCTCTACCTGCTGAACATCCTGGCCAGCTTCGTCCACCCGAACTTCTGGTTGCTGCTGGGCCGAATGCTGCGGt                                                    >  2:7699419/1‑151 (MQ=255)
                                                                                                gcCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGt                                                    >  2:2740076/1‑151 (MQ=255)
                                                                                                 cccTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGtt                                                   >  2:10919123/1‑151 (MQ=255)
                                                                                                  ccTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGttt                                                  >  2:256475/1‑151 (MQ=255)
                                                                                                  ccTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGttt                                                  >  2:9862744/1‑151 (MQ=255)
                                                                                                    tGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTc                                                <  1:10456548/151‑1 (MQ=255)
                                                                                                      cAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCt                                              <  2:1137243/151‑1 (MQ=255)
                                                                                                          gCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGAt                                          <  1:10585334/151‑1 (MQ=255)
                                                                                                          gCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGAt                                          <  1:4458367/151‑1 (MQ=255)
                                                                                                           ctactaCGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATg                                         >  1:3740544/1‑151 (MQ=255)
                                                                                                            tactacGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGa                                        <  2:6116146/151‑1 (MQ=255)
                                                                                                            tactacGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGACGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGGTTTCCTGGATGa                                        >  2:11257941/1‑151 (MQ=255)
                                                                                                              ctacGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGc                                      <  1:2718853/151‑1 (MQ=255)
                                                                                                               tacGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGcc                                     >  1:4928469/1‑151 (MQ=255)
                                                                                                               tacGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGcc                                     >  2:10099425/1‑151 (MQ=255)
                                                                                                               tacGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGcc                                     <  2:5450700/151‑1 (MQ=255)
                                                                                                               tacGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGcc                                     <  1:7435694/151‑1 (MQ=255)
                                                                                                               tacGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGcc                                     >  1:3553000/1‑151 (MQ=255)
                                                                                                                  ggcggcTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGCCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCtgg                                  <  1:768113/151‑1 (MQ=255)
                                                                                                                    cggcTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCtggtg                                <  2:3587484/151‑1 (MQ=255)
                                                                                                                    cggcTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCtggtg                                <  2:8633498/151‑1 (MQ=255)
                                                                                                                       cTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGAc                             <  1:6700135/151‑1 (MQ=255)
                                                                                                                       cTGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGAc                             <  1:983347/151‑1 (MQ=255)
                                                                                                                        tGGGTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACg                            >  1:1176865/1‑151 (MQ=255)
                                                                                                                         gggTCGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGt                           <  2:5115890/151‑1 (MQ=255)
                                                                                                                             cGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTc                       >  1:8920879/1‑151 (MQ=255)
                                                                                                                             cGACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTc                       >  2:8147439/1‑151 (MQ=255)
                                                                                                                              gACCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTcc                      <  1:8581415/151‑1 (MQ=255)
                                                                                                                              gACATGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTCCCGGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACGTCTGGTGGCTGCTGGGCATCATGCTGCGGTTGTCCTGGATGGGCCTGGTGGCCGTGGTcc                      >  2:7128709/1‑151 (MQ=255)
                                                                                                                               aCCTGCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCcg                     <  1:9045726/151‑1 (MQ=255)
                                                                                                                                   gCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGcc                 <  2:8915169/151‑1 (MQ=255)
                                                                                                                                        gCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGtt            >  2:1515207/1‑151 (MQ=255)
                                                                                                                                          cAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGTtcc          >  1:7547721/1‑151 (MQ=255)
                                                                                                                                            agcgtttCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCAGGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGTtcct         >  2:2212350/5‑151 (MQ=255)
                                                                                                                                              cgtttCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGTtcctcc       <  2:4588015/149‑1 (MQ=255)
                                                                                                                                               gtttCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGTTCCTCcg      <  1:9282644/150‑1 (MQ=255)
                                                                                                                                               gtttCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGTTCCTCcg      >  1:9081908/2‑151 (MQ=255)
                                                                                                                                                        |                                                                                                                                                  
GACGTGCTCGCCCGGGTGATTTACGGCTTCCGCGTGTCGATCCTCTTCGCCCTGACCCTGACCGTGCTCAGTTCTCTGATCGGCGTCACCGTCGGCGCCCTGCAAGGCTACTACGGCGGCTGGGTCGACCTGCTCGGCCAGCGTTTTCCTGGAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTGGGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGTTCCTCCGCGGG  >  NC_008463/3670391‑3670687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: