| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,787,820 | +A | pseudogene (898/3090 nt) | PA14_RS13085 → | CusA/CzcA family heavy metal efflux RND transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,787,819 | 1 | . | A | 95.8% | 1470.3 / 48.3 | 383 | pseudogene (897/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
| Reads supporting (aligned to +/- strand): ref base . (8/8); new base A (166/201); total (174/209) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 401 total aligned reads displayed.
CGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAT > NC_008463/2787669‑2787965 | cGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGccc > 1:4079515/1‑151 (MQ=255)cGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGccc > 2:4008161/1‑151 (MQ=255)cGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGccc < 1:2643089/151‑1 (MQ=255) ccTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCC‑aag < 1:8459009/151‑3 (MQ=255) gCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCC‑Aagggggt < 1:344178/151‑3 (MQ=255) aaGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCa > 1:7528017/1‑151 (MQ=255) aaGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCa > 2:7474274/1‑151 (MQ=255) aaGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCa > 2:10956485/1‑151 (MQ=255) ggAGCTGCGCCCCGGCGCGGCCACCGAGAACGGCCGCGATGTGGTGCTCGGCCCGGTGTTCATGCTGATCGGCGCGAACAGCCGGGAAGTGCCCCTGGCGGTCGGCCTGCGCCTGCAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCaag < 2:8447798/151‑3 (MQ=255) ggAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCaag < 2:6661884/151‑3 (MQ=255) cACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCAcc > 2:3007648/1‑151 (MQ=255) ccGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGt < 2:7688837/151‑1 (MQ=255) cGGCGCGGCCACCGAGAACGGCCTCGAAGTGGTGCTCGGCACGGTGGTCGTGCTGATCGGCGTGAACAGCCGGGAGGTGGCCCAGGCGGTCGGCCAGCGGCTGGCGGTGATCAACCGGAACAGGGCCA‑AGGGGGTCAAGGCGATCACCGTc > 2:8247565/1‑151 (MQ=255) cGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTc < 1:6257118/151‑1 (MQ=255) gcgcGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTa < 2:8876040/151‑1 (MQ=255) cACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGc > 1:7727288/1‑151 (MQ=255) aCCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGca > 1:8851050/1‑151 (MQ=255) cGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGcacc < 1:2415893/151‑1 (MQ=255) agaACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCTAGGCGATCACCGTCTACGACCGcaccac > 2:10011922/1‑151 (MQ=255) agaACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGcaccac > 1:9216109/1‑151 (MQ=255) aaCGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCAccc < 1:2974251/151‑1 (MQ=255) cGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTg < 1:3341311/151‑1 (MQ=255) cGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTg < 2:4431831/151‑1 (MQ=255) gCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggt < 1:8024987/151‑3 (MQ=255) cgcgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGTAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtgg < 2:1605053/151‑5 (MQ=255) cgcgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtgg > 1:6298733/1‑147 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCTGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac < 2:611285/151‑7 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac < 2:5136703/151‑7 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac < 2:6921503/151‑7 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaag > 2:1353866/1‑151 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaag < 2:10259658/151‑1 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaag > 2:5513392/1‑151 (MQ=255) gATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCCCCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctg < 1:1151096/151‑3 (MQ=255) aTCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctgg > 1:5369406/1‑148 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctggt < 2:7319181/151‑5 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctggt > 2:3844419/1‑147 (MQ=255) cGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtg < 2:9544037/151‑1 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGGGGCCACG‑GTGAAGAAGAA‑CCGGGTGGaa > 1:11363815/1‑151 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGaa < 1:10021710/151‑1 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGaa < 2:1194353/151‑1 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGaa < 1:9347690/151‑1 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAg < 1:16512/151‑1 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggc > 2:9471822/1‑151 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggc > 2:6715355/1‑151 (MQ=255) aaCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcg > 1:582458/1‑151 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcgg < 1:786757/151‑1 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGCAGAAGAA‑CCTGGTGGAAggcgcggc > 1:5270435/1‑151 (MQ=255) ccGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcg > 1:10646213/1‑151 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcgc < 1:7512225/151‑1 (MQ=255) ggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTg < 2:10857715/151‑1 (MQ=255) aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGt > 1:6468705/1‑151 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTg > 2:1875037/1‑151 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTg < 1:11115720/151‑1 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTg > 1:4661254/1‑151 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 2:2374468/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc > 2:4519531/1‑151 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 2:10225466/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc > 2:9023851/1‑151 (MQ=255) gCCCAGGCGGTCGGCCAGCGCCTGGAGGAGCTCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGCCCAGG‑CCGTGGCCACGGGGACGAAG‑ACCCTGGTGGAAGGCGCGGCGCTGGTGAGcg > 2:7237396/1‑151 (MQ=255) cccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgc < 2:5857542/151‑1 (MQ=255) ccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgcg < 1:1869173/151‑1 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg > 2:3441206/4‑151 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGAGCAACCGC‑ACACTGCCCAAGGGGGTCAAGGCGATCCCCGTCTACGACCGCACCACCCGGGTGGTCAAGG‑CCGAGGCCACGGTGCAGACG‑ACCCCGGTGGAAGGCGCGGCGCTGGTGATCGCgg < 2:8708520/148‑1 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 1:892028/149‑1 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 2:8128910/149‑1 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 2:4133979/149‑1 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTg < 1:6682679/150‑1 (MQ=255) gcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGc > 1:208933/1‑151 (MQ=255) cgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGct < 1:4836923/151‑1 (MQ=255) cgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCGGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGct < 2:11148976/151‑1 (MQ=255) tcggCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCtt < 2:2757267/148‑1 (MQ=255) cggCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTc < 2:3552154/149‑1 (MQ=255) cggCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTc < 1:3191091/149‑1 (MQ=255) cggCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGAGCTCTTc > 2:256183/3‑151 (MQ=255) cAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt > 1:2803944/1‑151 (MQ=255) gcgcCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTc < 1:4778136/151‑1 (MQ=255) gcCTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCt > 2:6463057/1‑151 (MQ=255) ccTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTc > 2:7907709/1‑151 (MQ=255) cTGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg < 1:1393602/151‑1 (MQ=255) tGGAGGAGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCgg < 1:10686988/151‑1 (MQ=255) ggaggaGATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGc < 1:6098927/151‑1 (MQ=255) ggagATCACCCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAG‑ACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAAc < 2:9120545/151‑1 (MQ=255) ggagATCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAAc < 2:3304529/151‑1 (MQ=255) gaTCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc < 1:9865821/151‑1 (MQ=255) aTCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc < 1:6508872/151‑1 (MQ=255) aTCAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGGGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc < 1:4415476/151‑1 (MQ=255) cAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgc < 1:714820/151‑1 (MQ=255) cAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgc < 1:544074/151‑1 (MQ=255) cAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgc > 2:1064462/1‑151 (MQ=255) cAACCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgc < 2:11557897/151‑1 (MQ=255) aaCCGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcg > 2:4791187/1‑151 (MQ=255) ccGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 1:9795115/151‑1 (MQ=255) ccGG‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGGTCCTCGGCAACATCcgcgcg > 2:4998988/1‑151 (MQ=255) gg‑ACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACTGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcggc < 1:10467211/151‑1 (MQ=255) aCCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGCAGAAG‑ACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGgcgc < 2:932843/151‑1 (MQ=255) cccTGCCCAAGGGGGTCAAGGCGATCACCGTCTCCGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCt < 2:2931093/151‑1 (MQ=255) cccTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCt < 2:31682/151‑1 (MQ=255) ccTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCCCG‑GTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTg > 2:11440758/1‑151 (MQ=255) tGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt < 1:180377/151‑1 (MQ=255) tGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt > 1:2511060/1‑151 (MQ=255) | CGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCTGCCC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAT > NC_008463/2787669‑2787965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |