| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 1,763,534 | 0 | T | G | 27.2% | 458.9 / 21.5 | 297 | L13R (CTC→CGC) | PA14_RS08240 | RHS repeat protein |
| Reads supporting (aligned to +/- strand): ref base T (62/141); new base G (76/0); total (154/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.39e-30 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 315 total aligned reads displayed.
CTGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCCT > NC_008463/1763384‑1763660 | cTGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccct < 1:7103089/151‑1 (MQ=33) tGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctc < 1:7342731/151‑1 (MQ=33) gTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctcg > 2:8720247/1‑151 (MQ=33) tcctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCCTACGTCCCCCGTCTCGGcgccctcgcc > 2:2186344/1‑151 (MQ=18) cctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCTTCCCCCCTGCCTTCCCCCGGCTCGgcgcccgcgccc > 2:11477358/1‑151 (MQ=11) ctccCTGTGCAGGTCAGCGAGCCCTGTCGGATCACCCGCGACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctcgccct < 2:2450491/151‑1 (MQ=16) tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTg < 1:3680975/151‑1 (MQ=33) tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTg < 1:2522942/151‑1 (MQ=33) tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTg < 1:2253968/151‑1 (MQ=33) ccGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGc < 1:10053380/151‑1 (MQ=33) ccGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGc < 2:2970351/151‑1 (MQ=33) ggTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCt < 1:4905107/151‑1 (MQ=33) ggTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCGACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCt < 1:5391718/151‑1 (MQ=18) gTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTg < 2:1101585/151‑1 (MQ=33) aGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCTTACTTCCCCCGTCTCGGCGGCCTCGCCCTGGCCTgcggc > 2:1983388/1‑149 (MQ=16) ggTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACACGGACGACCCCCATGCGCATGCCCCCGGACGTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCgccc > 1:11012377/1‑151 (MQ=11) ggTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccc < 1:6105391/151‑1 (MQ=33) aGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCTTCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCgccctggc > 2:5893787/1‑151 (MQ=18) aGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGGCGGCgccctggc > 1:8107711/1‑151 (MQ=16) cGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCAGGCGCAGCCCCCCCTACGTCCCCCGTCTCGGCGCCCTCGCCCGGGCCGGCgccctggccc > 2:5235650/1‑151 (MQ=11) gAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggccct < 1:8333256/151‑1 (MQ=33) gAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggccct < 1:8005427/151‑1 (MQ=33) ccGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGccc < 1:5770572/151‑1 (MQ=33) ggTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCGGCGCCCTGGCCCGGCCcgc > 1:416263/1‑151 (MQ=16) ggTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGGCTCGGCGCCCTCGCCCTGGCCGGCGCCCTGGCCCTGCCcgc > 2:1336167/1‑151 (MQ=18) gTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCcgcg < 1:6933165/151‑1 (MQ=33) gTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCcgcg < 1:1123523/151‑1 (MQ=33) tCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCgcgc < 1:6348614/151‑1 (MQ=32) tCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCGGCGCCCTGGCCCGGCCCgcgc > 1:4404241/1‑151 (MQ=255) ggATCACCCGCTACCAGTACGACGCCGAGGGACGCACGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCGGGCCCTGCCGGCGCAg > 2:7566898/1‑151 (MQ=255) gATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGGCTCGGCGCCCGCGCCCGGGGCGGCGCCCGGGCCCCGCCCGCGCCgg > 1:2101314/1‑151 (MQ=11) gATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCGCGGCCGGGCCGGGGGCCGGGCCCAGCCCGCGCCgg > 1:7905815/1‑151 (MQ=11) gATCACCCGCCACCCCTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCAGACAATGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAgg < 1:8688402/151‑1 (MQ=11) aTCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAggc < 1:7682020/151‑1 (MQ=31) tCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCGGCGCCCGGGCCCGGCCCGCGCAggcg > 1:6561507/1‑151 (MQ=9) acACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGTCGAGTCCGTCACCTCCCGCTGACATGTAAGAACCACATGCGCATCCCCCCATAATTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTTCGCCCTGGCCCTGCCCGCGCAggcg < 2:3511473/150‑1 (MQ=11) aCCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGGGCCCTGGCCCTGCCCGCGCTggcggc > 2:10663675/1‑151 (MQ=9) gCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAg < 2:2115539/151‑1 (MQ=31) gCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAg < 2:6000713/151‑1 (MQ=14) aCCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAgcgc < 1:9906928/151‑1 (MQ=31) tACGACGCCGAGGGACGCACGCCCGGCGAGACCGTCACCCCCCGCTGACAAGGACGACCCCCCTGCGCATCCCCCCCGACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTg < 2:6540880/151‑1 (MQ=11) tACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTg < 1:10701929/151‑1 (MQ=31) acgacgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCTCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCttg < 2:1789829/151‑3 (MQ=14) gacgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATGCTTCCCCCGTCTCGGCGCCCGCGCGCGGGCCTGCGCCCGGGCCCGGCCCGCGCCGGCGGCCGGGCGCGCCGGGag > 2:763985/1‑151 (MQ=11) acgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagc < 2:3766243/151‑1 (MQ=31) cccGAGGGACGCAAGACCGGCGAGACCGTCACCCCCCGCTGACAAGGACGACCCCCATGCGCAACCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagcta < 1:8535017/150‑1 (MQ=9) gAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCTGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCGGGagcgaccg > 2:2668193/1‑149 (MQ=255) gAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGGCTCGGCGCCCGCGCCCTGGGCTGCGCCCGGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCGGGagcgacag > 2:4843616/1‑151 (MQ=11) aGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacagc < 1:3990665/151‑1 (MQ=31) ggACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacagcta < 1:1686034/151‑1 (MQ=31) gACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCAGCGCCCTGGCCCTGCCCGGGCCGGCCGCCGGGCGCGCCTGGagctacagctac > 2:312725/1‑151 (MQ=11) cGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACaa < 1:6254712/151‑1 (MQ=31) cGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCTGGCCCGGCCCGCGCAGGCGGCCGAGCGCGCCTGGCgctgcagctccac > 2:11322401/1‑150 (MQ=11) cGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCTACAGCTTCaa > 2:10052821/1‑151 (MQ=9) gCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATCCTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCGGGCCCTGCCCGGGCAGGCGGCCGAGCGCGCCAGGAGCGACCGCGACCAc > 2:3597574/1‑151 (MQ=11) gCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAAc < 1:5949944/151‑1 (MQ=31) gCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAAc < 1:1433241/151‑1 (MQ=31) aaGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCTACAGCTACAACGc > 2:3394748/1‑151 (MQ=14) aCCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCAGCGCCCGGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCGGGAGCGACAGCTACAACGcccg > 1:2649949/1‑150 (MQ=11) gCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCGCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCGGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGc < 1:8444258/151‑1 (MQ=14) cGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCGTCGCCCGGGCCTGCGCCCTGGCCCTGACCGCGCAGGCGGGCGCGCGCGCCGGGAGCTACAGCAACAACGCCCTCGGcc > 2:5575265/1‑151 (MQ=11) cGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGCGCTACAGCTACCACGCCCTCGGcc > 2:7173600/1‑151 (MQ=14) gagaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACCGCTACAACGCCCTCGGCCt > 2:7917815/1‑151 (MQ=14) agaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCCTCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCAGGCCTGCGCCCGGGCCCTGCCCGCGCCGGCGGGCGAGCGCGCCGGGCGCATCAGCTACAACGCCCTCGGccag > 1:1465742/1‑149 (MQ=11) ccGTCACCACCCGCTGACAAGGACGACCCCCATGCGCCTCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCTGGCCCGGCCCGCGCAGGCGGCCGAGCGCGGCGGGAGCGACCGCGACCACGCCCGCGGCCGGATc > 1:6656271/1‑151 (MQ=11) ccGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATc < 1:7622700/151‑1 (MQ=31) ccGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATc < 2:6644425/151‑1 (MQ=31) cGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCCGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCg < 2:6817576/151‑1 (MQ=9) cGTCACCACCCGCTGACAAGGACGACCCCCATGCGCAGCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCg < 2:8132575/151‑1 (MQ=14) gTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCCCCCAGGCCCAGCCCGCGCCGGCGGCCGAGCGCGCCCGGAGCTAAAGCTACAACGCCCACCGCCAGATCGa > 1:114982/1‑151 (MQ=11) tCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAg < 1:119625/151‑1 (MQ=31) tCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCAGAGCGAg > 2:10887500/1‑151 (MQ=14) accaccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAgcg < 2:9820329/151‑1 (MQ=31) caccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCTGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCTGGAGCGCCAGCGACAACGCCCGCGGCCAGATCGAgcgcg > 1:1779603/1‑151 (MQ=11) accCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAgcgcgc < 1:1428602/151‑1 (MQ=31) ccGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCg < 1:8705122/151‑1 (MQ=31) cGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGa < 1:8932314/151‑1 (MQ=31) gCTGACAATGACGACCCCCATGCGCATCCCCCCATACAACCCCCGTCTCGGACACCACGCCCTTGCCAGCCCCCAGGCCCAGCCCCCGCAGGCGGCCGAGCGCGCCTGGATCTACAGAAACAACGCCCACGGCCAGAACGATCCCGCCGAc > 2:7749057/1‑151 (MQ=2) gCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCGGGCCTGCGCCCTGGCCCGGCCCCCGCCGGCGGGCGAGCGCGCCAGGTGCGACAGCGACAACGCCCGCGGCCAGATCGCGCGCGCCGAc > 1:3340527/1‑151 (MQ=11) cTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACg < 1:784518/151‑1 (MQ=31) tGACAAGGACGACCCCCATGCGCATCCCCCCCTACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCTACAGCGACAACGCCCACGGCCTGATAGACCGCGCCGACgg > 1:9286880/1‑151 (MQ=11) tGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCAGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCAACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACgg > 2:6145654/1‑151 (MQ=14) tGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCAGGCCAGCGCCCGGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCAGGAGCTACAGCGACCACGCCCTCGGCCTGATCGAGCGCGCCGCCgg > 2:4274257/1‑151 (MQ=11) tGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCAGGCCGGCGCCCGGGCCCGGCCCGCGCCGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCGCGGCCGGATCGAGCGCGCCGACgg > 1:9636176/1‑151 (MQ=11) tGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCCCCCTCGCCCTGGCCAGCGCCCAGGCCCAGCCCGCCCAGGCCGCCGCGCGCGCCTGGAGCAACCGCGACAACGCCCACGGCCAGATCGCGCGCGCCGACgg > 1:5328162/1‑151 (MQ=11) gACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGt < 1:289121/151‑1 (MQ=31) aCAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCAGCGCCCAGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGCGCGACAGCTACAACGCCCGCGGCCTGATCGAGCGCGCCGACGGTc > 1:7517396/1‑151 (MQ=11) cAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTcc < 1:9453397/151‑1 (MQ=31) cAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCCCCCCGGCCCGGCCCGCCCCGGCGGCCGCGCGCGCCGGGCGGTACCGGAACAAAGCCCACGGGCTGAAAGAGCGCGCCGGCGGGcc > 1:3220272/1‑151 (MQ=2) aGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCcgc < 1:9838713/151‑1 (MQ=31) ggACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGGCAGCGCCCAGGGCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGGGCTACAGCTACAACGCCCACGGCCGGAACGAGCGCGCCGCCGGTCcgcg > 1:3529422/1‑151 (MQ=11) ggACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCTGGCCCAGCCCGCGCAGGCGGCCGAGCGCCCCTGGAGCTACAGCTACAACGCCCACGGCCAGAACGAGCGCGCCGCCGGTccccc > 1:1823806/1‑148 (MQ=11) acgacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCAGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCa > 2:6218172/1‑151 (MQ=14) gacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCAGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGAACGAGCGCGCCGACGGTCCGCGCAcc > 2:9453147/1‑151 (MQ=14) gacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCCCCCGGGCCAGCGCCCTGGCCCGGCCCGCGCAGGCGGCCGAGCGCGCCAGGAGCGACAGCTACCACGCCCTCGGCCAGATCGAGCGCGCCGACGGTCCGCGCAcc > 1:10247128/1‑151 (MQ=11) gacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCAGGCCCGGCCCGCGCAGGCGGCCGGGCGGGCCTGGAGCACCCGCGACAACGCCCGCGGCCTGATCGAGCGCGCCGCCGGTCCGCGCAcc > 2:4105980/1‑151 (MQ=11) acCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCGGGCCAGCGCCCAGGCCCGGCCCCCGCAGGCGGCCGAGCGCGCCAGGAGCTACAGCGACAAACCCCACCGCCAGATCGAGCGCGCCGACCGTCCCCGCACCg > 1:5629821/1‑151 (MQ=11) cccccATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCAGGCCTGCGCCCAGGCCCAGCCCCCGCAGGCGGGCCAGCGCGCCGGGAGCTACAGCGAAAACGCCCACGGCCAGAAAGAGCGCGCCGACCGTCCGCGCACCGa > 1:5190037/1‑151 (MQ=11) cccccATGCGCATCCCCCCATACTACCCCCGTCTCGGCGCCCACGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACCCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGa > 2:9112606/1‑151 (MQ=9) ccccATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGAt < 1:10361276/151‑1 (MQ=11) | CTGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCCT > NC_008463/1763384‑1763660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |