Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084633,630,8250GT24.3% 346.0 / 31.5 206intergenic (+16/‑259)tse1/metHtype VI secretion system effector peptidoglycanhydrolase Tse1/methionine synthase
Reads supporting (aligned to +/- strand):  ref base G (48/105);  new base T (0/49);  total (49/157)
Fisher's exact test for biased strand distribution p-value = 3.50e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 213 total aligned reads displayed.

GGCAGCATCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCCGCGGAT  >  NC_008463/3630675‑3630975
                                                                                                                                                       |                                                                                                                                                       
ggCAGCATCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGGTGCg                                                                                                                                                         >  2:2289845/1‑151 (MQ=255)
ggCAGCATCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCg                                                                                                                                                         <  1:4246151/151‑1 (MQ=255)
   agcaTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAAt                                                                                                                                                      <  1:829330/151‑1 (MQ=255)
   agcaTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAAt                                                                                                                                                      <  1:8039466/151‑1 (MQ=255)
   agcaTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCGGCGAAt                                                                                                                                                      >  1:8400293/1‑151 (MQ=255)
    gcaTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATg                                                                                                                                                     <  2:11590823/151‑1 (MQ=255)
    gcaTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATg                                                                                                                                                     <  2:8984478/151‑1 (MQ=255)
    gcaTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATg                                                                                                                                                     <  2:10242224/151‑1 (MQ=255)
     caTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGa                                                                                                                                                    <  2:10955140/151‑1 (MQ=255)
      aTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAg                                                                                                                                                   <  2:9008835/151‑1 (MQ=255)
      aTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAg                                                                                                                                                   <  2:1415946/151‑1 (MQ=255)
      aTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAg                                                                                                                                                   <  1:7812058/151‑1 (MQ=255)
      aTCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAg                                                                                                                                                   <  1:444734/151‑1 (MQ=255)
       tCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGc                                                                                                                                                  <  2:11076253/151‑1 (MQ=255)
         gCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCa                                                                                                                                                <  2:11413780/151‑1 (MQ=255)
            ggCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCGGCGAAagaggcccga                                                                                                                                             >  1:5741290/1‑145 (MQ=255)
            ggCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCGGCGAAAGTGCCAGAc                                                                                                                                             >  2:7107140/1‑151 (MQ=255)
               gcgGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCa                                                                                                                                          <  1:2583697/151‑1 (MQ=255)
                cgGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGGTGCGCATGAGCCAGaaacat                                                                                                                                         >  1:4728884/1‑146 (MQ=255)
                 ggTCGGCCAGAGCCAGGGCCTGAAGTCGGCCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCAtt                                                                                                                                        <  1:9219081/151‑1 (MQ=255)
                  gTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTc                                                                                                                                       <  2:2354454/151‑1 (MQ=255)
                   tCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGGTGCGAAAGTGCCCGACTCATTCg                                                                                                                                      >  2:7985778/1‑151 (MQ=255)
                   gcGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCg                                                                                                                                      <  1:6354268/150‑1 (MQ=255)
                    cGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCgc                                                                                                                                     <  2:6017863/151‑1 (MQ=255)
                     ggCCAGCGCCCGGCCCTGCAGTCGGTCGGCCAGGTGTGTCATCGCACCGACCGCGACCGCCTCAACTACTCCGTCTACTCCCTGGCCAGTTGCAGCCTGCCCACGGCCA‑GCTGATTCAGCCCGTGCTGCGCATGAGCCAGACCCATTCgca                                                                                                                                    <  2:106549/151‑1 (MQ=255)
                     ggCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGGGGCGGATGAGCCACACGCaatagcg                                                                                                                                    >  1:610348/1‑145 (MQ=255)
                     ggCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCgca                                                                                                                                    <  1:1737399/151‑1 (MQ=255)
                     ggCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCgca                                                                                                                                    <  2:9487277/151‑1 (MQ=255)
                     ggCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAAAGTGCCAGACACAATAgca                                                                                                                                    >  2:7242668/1‑151 (MQ=255)
                     ggCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCGGCGAAAGAGCCCGACTCAATAgca                                                                                                                                    >  2:8257598/1‑151 (MQ=255)
                        cAGAGCCAGGGCCTGAGGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACTTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCT‑GTTGTTTCAGGCCGTGCTGCGACTGAGCCAGACTCATTCgcagca                                                                                                                                 <  2:7516128/151‑1 (MQ=255)
                        cAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCACCTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCgcagca                                                                                                                                 <  2:3463014/151‑1 (MQ=255)
                        cAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCgcagca                                                                                                                                 <  2:6586746/151‑1 (MQ=255)
                         agagCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCGCAGCAc                                                                                                                                <  1:7298193/151‑1 (MQ=255)
                         agagCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCGCAGCAc                                                                                                                                <  2:5396398/151‑1 (MQ=255)
                         agagCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCGCAGCAc                                                                                                                                <  2:5734040/151‑1 (MQ=255)
                           agCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGGGGCGCAAGTGGCCGAATCATTGgcagccagc                                                                                                                              >  1:11106481/1‑147 (MQ=255)
                             ccAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCTGTTGCAGCCTGCCCAGGGCCA‑TTTGATTCTGGCCGTGCTGCGAATGAGCCAGACTCATTCGCAGCACGAtt                                                                                                                            <  2:8709334/151‑1 (MQ=255)
                             ccAGGGCCTGAAGTCGGTCGGCCAGGTGGGGAATCGCACCGACCGCCACCGCCACAACTACTACGTATACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCGCAGCACGAtt                                                                                                                            <  2:9795176/151‑1 (MQ=255)
                                gggCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAAATATCCCAACACATACGCAGCAccaatacc                                                                                                                         >  2:9714323/1‑144 (MQ=255)
                                     tGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAAAGTGCCAGACAAAATCGCCGCACGATTacccccca                                                                                                                    >  2:9553435/1‑147 (MQ=255)
                                       ttgtgggtcggCCTGGTGTGTAATCGCACCTACCGCCACCGCCTCAAATACTCGGTCTACCCCCTGGACATTTCCAGCTTGCCCTGGGCTT‑GTTGATTCTGGCCTTGCTGCTATTGTGCCTTATTATTTCGCAGCACGATTCCCCACGAGc                                                                                                                  <  2:2506596/146‑1 (MQ=255)
                                          tcggtcggCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGTGCCAGACTCAATCGCAGCACGATTCCCCACCCGCATc                                                                                                               >  2:10298279/1‑151 (MQ=255)
                                                      gtgtGGAAGCGCCCCGCCGGCGACCGCCTCACCTACTCCGTCTCCGCGCTGGCCTGGGCCCGCCGGCCCTGGCCCT‑TTTGTTTCTGGCGGTGTGGCTATTGCGCCACACTATGGCGCCCCACGATTCCCCACGAGCATCCCGACTCCAC‑Tc                                                                                                  <  2:7778808/151‑1 (MQ=255)
                                                       tgtgTAATCGCACCGACCGCGACCGCCTCAAATACTAGTTATACTCCCGGCCCCGTTGCAGCCTGCCCTGGGCCA‑GTTGATTCAGCCGGTGTTGCTATTGCGCCATACTCTTCCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCg                                                                                                 <  2:1755618/151‑1 (MQ=255)
                                                             ttCGAACTGACCGCTACCGCTTAAAATACTACTTATACTCCCGGGCATGTTGCTGCTTGCCATGGGCAA‑TTTGTTTCAGGCGTTGCTGTTATTTCGCCTTACTCTTTCGATGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTc                                                                                           <  2:635045/150‑1 (MQ=255)
                                                             aTCGCACCGACCGCTACCGCCTCAACAACTACGTCTACTCCCTGGCCTGTTGCTGCCTGCCCTGGGCCT‑GTTTTTACTGGCGGTGCTGCGATTGAGCCTTACCATTTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTc                                                                                           <  2:4249738/151‑1 (MQ=255)
                                                                    cgcccgctaccgcCTAAACTCCTACTTATCCTCCTGGGCCTTGTGCCGCCTCCCCCGGGCCT‑TTTTTTTCGGGCGGTGGTCCGATTGAGCCTCACTATTTCGCCGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTtctc                                                                                    <  2:3009854/148‑1 (MQ=255)
                                                                     gaccgcgaccgcCTCAAGTACTCCGTCGAGTCCGTGGCATGTTGCCGCCTGCCCTGGGCCA‑GTTGTTTCTGGCGGTGCTGCGAATGAGGATTCCTCTTTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TGGCCCGTCGCTTCTcc                                                                                   <  2:8183419/151‑1 (MQ=255)
                                                                     gaccgcgaccgcCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGGTGCGCATGTGCCACAAAAAATAGAAGCACGAATACCCAAGAACATACCGACACACC‑TAGCCCCGCCCTtcagc                                                                                   >  2:3850762/1‑148 (MQ=255)
                                                                     gaccgcgaccgcCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGGATTTTCCAGACACAATAGCAGCAACAATACCCACCAGCATACCGACACCAA‑ACCCCCGTCCCATCGcc                                                                                   >  2:5960945/1‑151 (MQ=255)
                                                                      acggcgcccgcCTAAACTACTACGTATACTCCCTGGCCTGTTGCAGCCTGCCCTGGGCCT‑TTTGATTCTGGCGGTGCTGCTATTGTGCCAGACTAATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTccg                                                                                  <  2:1887729/148‑1 (MQ=255)
                                                                        cgcgaccgcCTCAACTCATACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAAATATCCCTACACATTAGCAGCACGATTCCCCACCAGCATCCCGCCACCAC‑ACGCCCGGCCCGTCGccacc                                                                                >  2:8524905/1‑151 (MQ=255)
                                                                          cgaccgcCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCGGCGAAAGAGCCCGACTCCATCGCCGGCCGATTACCCCCCAGCAACCCGACGCCACGCCCCCCGTCCC‑TCGccgcccc                                                                              >  2:8993844/1‑150 (MQ=255)
                                                                            accgcCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAAAGAGCCAGACTCCATCGCAGCACGATTCCCCACGCGCAAACCGCCACCAC‑GCGCCCGGCCCGTATCcgcccgcc                                                                            >  2:6546844/1‑151 (MQ=255)
                                                                              cgcCACAACTACTACGTCTACGCCCTGGCCAGTGGCAGCCTGCCCTGGGCCA‑TTTGTTTCTGGCCGTGCTGCTAATGAGCCTGACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACCCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTg                                                                          <  2:6044625/151‑1 (MQ=255)
                                                                                ccTCAACTACTCCGTCTACTCCCTGGCCTGTTGCAGCCTGCCCTGGGCCT‑TTTTTTTCAGGCGTTGCTGCGATTGAGCCAGACTCATTGGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTgcg                                                                        <  2:5672233/151‑1 (MQ=255)
                                                                                     acaacaacGTCTACTCCCGGCCCTGTTCCCCCCTGCCCCGGGCCT‑TTTTATTCGGGCGGTGCTGCTATTGCGCAAGACACATTCCCACCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTc                                                                   <  1:10357729/145‑1 (MQ=255)
                                                                                      ctactaCGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAAAGAGCCAGACACAATCGCAGCACCAATCCCCACCAGCCACCCGCCACCAC‑ACGCCCCGCCCAACTCCGCCCCCCAGCGCACTcc                                                                  >  2:11378678/1‑151 (MQ=255)
                                                                                       tactccTTCTACTCCCGGGCCTGTTGCCG‑CGGCCCCTGGCCATGTTGTTCCGGGCGGTGCTGCTATTGAGCCAGAATCATGCGCACCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCg                                                                 <  2:4845160/151‑1 (MQ=255)
                                                                                       tactacTTCTACTCCCGGGCCTGTGCCCGCCTGCCCCGGGCCT‑GTTTATTCTGGCGGTGCTGCGAATGAGCCATACTCTTTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCg                                                                 <  1:9552084/151‑1 (MQ=255)
                                                                                         ctccGTCTACCCCCTGGCCTGTTGCAGCCTGCCCTGGGCCT‑GTTTTTTCTGGCCTTGCTGCTATTTAGCATGACTCTTGCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGAc                                                               <  2:4966928/148‑1 (MQ=255)
                                                                                         ctacGTCTACTCCCGGGCCTGTGGCAGCCTGCCCCGGGCCT‑TTTGATTCCGGCGGTGCTGCGAATGAGCCATACTCATACGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGAc                                                               <  2:5562042/151‑1 (MQ=255)
                                                                                           acGTCTACACCCTGGCCTGGTGCCGCCGGCCCTGGGCCT‑TTTGATTCAGGCCGTGCTGCTAATGCGCCAGACACATGCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCt                                                             <  2:7919581/151‑1 (MQ=255)
                                                                                               ccaCTCCCTGGCCCGTTCCAGCCTCCCCTGGGCCC‑TTTGTTCCCGGCGGTGCGGCGATTGTGCCTGACTCCGTCGCCGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGc                                                         <  2:1133133/149‑1 (MQ=255)
                                                                                               cTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGGTGCGAATGAGCCAGACTCATTGGCCGCACGCTTCCCCACCAGCATACCGACACCAC‑TCGCCCGGCCCATCTCCGCCCGCCGGCGCCCACCGaccacccc                                                         >  2:9163048/1‑149 (MQ=255)
                                                                                                  cTCCGTGGCCTGTGGCTGCGTGCCCTGGGCCT‑GTTGATTCTGGCCGTGGTGCTAATGACCAAGACTCATGGGCCGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCAtt                                                      <  2:3573748/151‑1 (MQ=255)
                                                                                                      cgggCCAGTGGCCGCCGGCCCGGGGCAC‑GTTGATCCGGGCGGTGGTGCTAATGCCCCAGACTCTTTCGCCCCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGc                                                  <  2:4893379/149‑1 (MQ=255)
                                                                                                       tGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGGGCAATTGCCCGACACATTAGCAACGCGGTTGCCCACCAGCAAACCCGCTACCC‑GCGCCCGGCCCATCTGCGCCAGCCAGCGCCCACCCCCCGCCCCATTCCGcc                                                 >  2:4363954/1‑151 (MQ=255)
                                                                                                         gcatgTTCCAGCCTGCCCTGGCCCT‑TTTTTTTCTGGCGTTGCTGCTATTCAGCCACAATATTTCCACCCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCg                                               <  1:224136/147‑1 (MQ=255)
                                                                                                          ccATTTGCTGCCTGCCCTGGGCAC‑TTTTTTTCCGGCCGTGATGCTATTGAGACAGACTATTGCGAAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGt                                              <  2:7892322/151‑1 (MQ=255)
                                                                                                             tttGCAGCCGTCCCTGGGCCT‑GTTGATCCCGCCGGTGCTGCGTCTGCGCCAGACTCCTTCGCTCCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTAtg                                           <  1:1584143/150‑1 (MQ=255)
                                                                                                             gTTGCAGCCTGCCCAGGGCCT‑GTTGATTCCGGCCGTGCTGCGAATGAGCCAGACTCCTGCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTAtg                                           <  2:11253433/151‑1 (MQ=255)
                                                                                                              tggctgCCGGCCCTGGGCCT‑TTTTATACCGGCCGTGCGGCTATTGCGCCACCCTCTTTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTAtgc                                          <  1:3747673/146‑1 (MQ=255)
                                                                                                               tccAGCCGGCCCCGGGCCA‑GTTTTTTCAGGCCGTGCGGCGAATGCGCAACACTCATCCGCACCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTAtgct                                         <  1:7012700/149‑1 (MQ=255)
                                                                                                                      tGCCCTGGGCCA‑TTTTTTTCTGGCCTTGATGCTAATGAGCAATAATAATTCCCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACaa                                  <  1:3694360/151‑1 (MQ=255)
                                                                                                                      tGCCCGGGGCCT‑TTTTATTCGGGCCGTGCGGCGAAGTACCCAGAGTCATTCCCCCCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACaa                                  <  1:7153563/151‑1 (MQ=255)
                                                                                                                       gCCCTGGGCCT‑GTTGTTTCTGCCCGTGCTGCTAATGCGCCAGACTCTTCCGCACCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACaaa                                 <  1:885039/151‑1 (MQ=255)
                                                                                                                       gCCCAGGGCCC‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCAGTCGCTGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACaaa                                 <  2:1553886/151‑1 (MQ=255)
                                                                                                                           aGGGCCA‑GTTGATTCAGGCCGTGCTGCGAAAGATGCAGAAAAATTAGCAGCACCATTACCCACCAGCAAACCCACACCAA‑AAGCCCCTCCCATAACCCCCCCCCGGCGCACACCGAACACCCCAATACGCCCCGATGGTGCGACaaaaacg                             >  2:7362526/1‑148 (MQ=255)
                                                                                                                                 ctttttaTTCTGGCCGGGCTGCTATTTCGCCTGACTAATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCa                        <  2:3798283/145‑1 (MQ=255)
                                                                                                                                   gTTTATTCCGGCCGGGCTGCGATTGAGCCACACTCATGCGCCCCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAgg                      <  1:10454725/151‑1 (MQ=255)
                                                                                                                                    tttaTTCTGGCCGTGCTGCTAATGAGCCATACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAggg                     <  1:4333253/148‑1 (MQ=255)
                                                                                                                                       tttCAGGCGGTGCTGCGAATGAGCCAGACTCATGCGCTGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCt                  <  2:1636554/150‑1 (MQ=255)
                                                                                                                                        ttCAGGCCGTGCTGCGAATGAGCCAGACTCAGTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCtt                 <  2:9303600/151‑1 (MQ=255)
                                                                                                                                          ccggCCGTGCTGCGAATGCGCAAGCCTCTTTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCtttt               <  2:2079392/149‑1 (MQ=255)
                                                                                                                                          ccggCCGTGCTCCTAATGCGCCATACTCATTCCCACCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCtttt               <  1:10120409/149‑1 (MQ=255)
                                                                                                                                           cggCGGTGCTGCTAATGCCCATTACTCTTCCGCCCCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTc              <  1:393314/150‑1 (MQ=255)
                                                                                                                                            ggCCGTGCTGCTAATGAGCAATACTATTTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTcc             <  2:3446557/151‑1 (MQ=255)
                                                                                                                                             gCCGTGCTGCGAATGTGCCTGACTCATTCGCAGCACGATTCCCCACGCGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCg            <  2:2849478/151‑1 (MQ=255)
                                                                                                                                             gCCGTGCTGCGAAAGAGCCAGACACATTAGCAACACGATTACCCACGAGCATACCCACACCAC‑ACCCCCGTCCCATATCCCCCCGCCTGCGCACACCCACCACCGCATTACGCCCGAAAGCTGCGACAAAACGGCGCCAGGGGCTTTTACg            >  2:695585/1‑151 (MQ=255)
                                                                                                                                             cccGTGCTGCGAATGCCCCAGACCCATCCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTGTCCg            <  1:9119006/150‑1 (MQ=255)
                                                                                                                                                gTGCTGCGAATGAGCCAGCCTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTGCTCCGCCCGCAAGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTGATCCGGcc         >  2:9582461/1‑151 (MQ=255)
                                                                                                                                                  gcggcGATTGAGCCAGACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCcg       <  2:2682610/148‑1 (MQ=255)
                                                                                                                                                  gcggcGACTGAGCCTTACTCTTGCGCTGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCcg       <  2:4760689/148‑1 (MQ=255)
                                                                                                                                                    tgcTAATGCCCCACACTCTTTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCcgcg     <  1:11575424/151‑1 (MQ=255)
                                                                                                                                                    tgcTAATGAGCAATACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCcgcg     <  2:1050695/151‑1 (MQ=255)
                                                                                                                                                    tgcGAATGAGCCAGACTCATTCGCAGCTCGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCcgcg     >  2:6250112/1‑151 (MQ=255)
                                                                                                                                                       gAATGAGCCAGACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCCGCGGAt  >  2:8368872/1‑151 (MQ=255)
                                                                                                                                                       gAATGAGCCAGACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCCGCGGAt  >  1:9682767/1‑151 (MQ=255)
                                                                                                                                                       |                                                                                                                                                       
GGCAGCATCGCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGCACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCAGTTGCAGCCTGCCCAGGGCCA‑GTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCAC‑TCGCCCGTCCCTTCTCCGCCCGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATGCTGCGACAAAACGGCGCCAGGGGCTTTTCCGGCCCGCGGAT  >  NC_008463/3630675‑3630975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑