Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 5,910,256 | 0 | A | C | 26.1% | 783.7 / 38.7 | 338 | intergenic (+55/‑90) | aceE/aceF | pyruvate dehydrogenase (acetyl‑transferring), homodimeric type/dihydrolipoyllysine‑residue acetyltransferase |
Reads supporting (aligned to +/- strand): ref base A (170/77); new base C (2/85); total (172/166) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.17e-31 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 347 total aligned reads displayed.
CTGGCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAGCTG > NC_008463/5910106‑5910405 | cTGGCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCaa > 2:10456871/1‑151 (MQ=255) tGGCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAc < 1:2075852/151‑1 (MQ=255) tGGCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCCCCCAc > 1:9190667/1‑151 (MQ=255) ggCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑g > 2:7135986/1‑151 (MQ=255) ggCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑g > 2:6581078/1‑151 (MQ=255) ggCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑g < 2:2134389/151‑1 (MQ=255) gCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑gg < 1:516742/151‑1 (MQ=255) cGATCGCGGCGCTATCGAGCCGAAAGGGGTGGCCGAGGCCCTCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑Gggc < 1:2444003/151‑1 (MQ=255) cGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑Gggc < 1:10379385/151‑1 (MQ=255) cGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑Gggc < 1:10031327/151‑1 (MQ=255) tCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑Gggcggc < 2:9040064/151‑1 (MQ=255) cgcgGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGgcggcg < 2:25682/151‑1 (MQ=255) cgcgGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGgcggcg > 1:8309808/1‑151 (MQ=255) cgcgGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGgcggcg < 2:26181/151‑1 (MQ=255) cgcgGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGgcggcg > 2:10291959/1‑151 (MQ=255) gcggcgATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGgcgc < 2:4739347/151‑1 (MQ=255) gcgATCTCGAGCAGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGTTTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCgg < 2:1201818/151‑1 (MQ=255) gcgATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCgg < 2:9662118/151‑1 (MQ=255) gATATCGAGCCTAATGTGGTGGCCGCGGCCATCGCAATGTACGTTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTATTTCGCTCCATACTCCCCTCGGCAGCGTGGGGTTTCTAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑t < 2:4186935/151‑1 (MQ=255) atatCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCCCCCAC‑CGGCGGCCCCGGcgc > 1:4326740/1‑149 (MQ=255) ccGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGaa > 2:6450768/1‑151 (MQ=255) gAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACCACGAAcc > 1:2558163/1‑151 (MQ=255) aaGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑aa > 2:8565438/1‑151 (MQ=255) tggCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCa > 2:3480291/1‑151 (MQ=255) gCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCaaa > 1:2845660/1‑151 (MQ=255) aGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑GGGCGGCGCCGGC‑TCACAACCAACC‑AAGGAACAAAAGta > 1:10946067/1‑150 (MQ=255) aGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGACGCCAAC‑GGGCGGCGGCGGC‑TCACAAAGAAAC‑AATGAACAAAAGtg > 2:5900559/1‑150 (MQ=255) gCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑CGGCGGCGCCCGC‑TCACAAAGAACC‑AAAGAACAAAAGTCtt > 1:306816/1‑151 (MQ=255) gCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCCCCCCCCAC‑CGGCGGCGCCCGC‑GCACAACCAACCAAAGAACCaaaatcgt > 1:1021434/1‑147 (MQ=255) cATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑GGGCGGCGCCGGC‑TCACCACGAACC‑AAGGACCCAAAGTCTTTg > 2:1828243/1‑151 (MQ=255) cATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGG‑TCACAACGAACC‑AAGGACCAAAAGTCGTTg > 1:1842486/1‑151 (MQ=255) gcaccgTACGTTCTCTACCCGGCGAACCGCAACCCGCTGCATTGCTAATACGCACAATCCTCCCCCCGCACGCGCGGGGTTCCGCGCCCGCCGCCGCCGCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAACAGTCTTTGtttt < 2:5440311/146‑1 (MQ=255) aaGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTgcg > 2:1708619/1‑151 (MQ=255) aaGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACCAACC‑AAGGACCAAAAGTCTTTGTTTTgcg > 2:9860792/1‑151 (MQ=255) aggcgggTATCGATCCGGAGACGGCCAACCCGCGGTATTGCTAATTCGCTCAATCCCCCCCGCGGCAGCGGGGGTTTGCTCGCACGCCGGCGCCGCCAAG‑GGGGGGGGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTgcgc < 2:7345287/146‑1 (MQ=255) tACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTgcgcgc > 2:4794667/1‑151 (MQ=255) tACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑GCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTgcgcgc > 1:7595727/1‑151 (MQ=255) cGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCCCCCAC‑GGGGGGCGCCGGC‑GGACAAACAACC‑AAGGACCAAACGTCTTTGGTTTGGGcgccg > 1:65931/1‑151 (MQ=255) tATCGACCCGGACAAGCGCACCCCGCTGTTTTGATAATTCGCTCCAAACCCCCCCCGGCCGCGTGGGGTTTCGCGCCCGCCGGCGCCGCCACG‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGcac < 1:7699638/151‑1 (MQ=255) tCGATCCGGTGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCCCCCCC‑GGGCGGGGCCGGG‑GGCCAACGCACC‑AAGGGCCCAAAGTCGTGGGTTGGGGCGGCGCACAg > 1:3352580/1‑151 (MQ=255) cGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACCACGAACC‑AAGGACCACAAGTCTTTGTTTTGCGCGCCGCACAGc > 2:11216033/1‑151 (MQ=255) gATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCCCCCAC‑GGGCGGCGCCGGC‑TCACAACCAAAC‑AAGGACCAAAAGTTGTTGTTTTTCGCGCCGCACACCg > 1:9840060/1‑151 (MQ=255) ccGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCCGCGCCGGC‑TCACCACGAACC‑AAGGACCAAAAGTCGGTGTTTTGCGCGCCGCACCGCggtg > 2:3695323/1‑151 (MQ=255) ggAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCCCAAGTCTTTGTTTTGCGCGCCGCACAGCgggggg > 2:10764263/1‑150 (MQ=255) gaAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGc > 2:9314729/1‑151 (MQ=255) cgcAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCAAAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCCCAGCGGTGGTGGCACGt > 2:5747195/1‑151 (MQ=255) cAACCCGCGGTATTGATAATTCGCTCCATCCACCCCTCGGCAGCGTGGGGTTTCGCGCACGCCGGCGCCCCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTaa < 2:9190667/151‑1 (MQ=255) aaCCCGCTGTTTTGAAAAGCCGCTCAAACCACCCCGCGGCTGCGTGGGTTTCCGACCACGCCGCCGCCCCCACG‑GGGCGCCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTaaa < 2:8014013/151‑1 (MQ=255) aaCCCGCTGGATGGCTATGTCGCGCCACCCGCCCCGCGGCCGCGTGGGGTCTCGCCCACGCCGGCGCCGCACAC‑GGCCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTaaa < 2:2225609/151‑1 (MQ=255) cccGCTGTATTGATAATCCGCTCCACCCCCCCCGCGGCCGCGTGGGTTTTCGCGCCCGCCGGCGCCCCCACG‑GGGCGGCCCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAg < 1:7353794/151‑1 (MQ=255) cccGCTGGATTGATAATCCGCACCAAACCCCCCCCGGCTGCGTGGGGTTTCGCGCACGCCGGCGCCGCAACG‑GGGGGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAg < 1:7492119/151‑1 (MQ=255) ccGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACCACGAACC‑CAGGACCCAACTTGTTTGTTTTGCGCGCCGCACAGCGGTGGGGGCACGGAAAAgg > 2:7154529/1‑151 (MQ=255) cTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAA‑GGGCGGCGCCGGC‑GCACAACGAAAC‑AAGGACCAAAAGTATTTGTTTTGCGCGGCGCACAGCGGTGGGGGCACGATAAAGgaga > 1:4697303/1‑151 (MQ=255) cTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TAACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGgaga > 2:2389382/1‑151 (MQ=255) cTGGATTGCTAATTCGCGCCATACTCCCCTCGGCAGCGAGGGGTTGCGACCACGCCGGCGCCGCCACC‑GGGCGGCCCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGgaga < 2:8934174/151‑1 (MQ=255) tGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCCCCCAC‑CGGCGGCGCCCGCGCCACAAC‑AACC‑AAAGACCCAAAGTGTTTTTTTTTGGCGCCGCACACCGGTGGGGGGACGGAAAATGagag > 1:2933534/1‑151 (MQ=255) gATTGCAAATTCGCACAAACCTCCCCTCGGACGCGGGGGTTTTCGACCACGCCGGCGCCGCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGa < 1:486562/151‑1 (MQ=255) tttGCTAATTCGCTCCATACGCCCCGCGGCCGCGCGGGGTTTCGACCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGaa < 2:9955090/150‑1 (MQ=255) tgatatttCGCTCCATACTCCCAGCCGCAGCGAGGGGTTTCGCGCACGCCGGCCCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAACAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAAtg < 2:7929041/145‑1 (MQ=255) cTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑GGGCGGCGCCGGC‑GCACCACGTACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGGCGCACAGCGGGGGTGGCCCGGCAAAGGAGAGGataggg > 2:9778311/1‑146 (MQ=255) cTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑GGGCGGCGCCCGC‑TCACAACGAACC‑AATGACCAAAAGTGGTTGTTTTGGGCGCCGCACAGCGGGGGTGGCACGTAAAAGGGGAGGAAtgtg > 1:688849/1‑151 (MQ=255) cTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACCACGAACC‑AAGGACCCAAAGTCTTTGTTTTGGGCGCCGCCCCGCGGGGGTGGCCCGTAAAAGGAGAGGAAagtg > 1:8444271/1‑151 (MQ=255) aaTTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGTACC‑AAGGACCAAAAGTGTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGTGTGGAAtgtgtg > 1:10609425/1‑149 (MQ=255) aaTTCGCCCCATCCTCCCCCCGGCAGCGAGGGGTTTCGCGCACGCCGGCGCCGCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAg < 1:11533780/151‑1 (MQ=255) cGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑GCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGGCCGGAAAAGGAGAGGAAGGTGAGCGaa > 1:11615673/1‑151 (MQ=255) gCTCAATACCCCCCCCGGCAGCGCGGGGTTTGGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAAc < 2:1513644/151‑1 (MQ=255) cTCCACACCCCCCCCGCCAGCGCGGGGATTCGCCCACGCCGGCGCCGCCCCG‑GGGCGGCCCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACt < 1:7106157/151‑1 (MQ=255) cATCCTCCCCTCGGCAGCGTGGGGTTTCGAGAACGCCGGCGCCGCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCAt < 2:9458142/151‑1 (MQ=255) tcccccccccGGCTGCGCGGGGTTTCGAGCACGCCGGCGCCGCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTc < 2:6368978/147‑1 (MQ=255) tccTCCCCTCGCCAGCGTGGGGTTTCCAGCACGCCGGCGCCGCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTc < 2:524264/149‑1 (MQ=255) aCTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑GCACAACGAACC‑AATGACCAAAATTGTTTGTTTTTGGCGCCGCACAGCGGTGGTGGGACGGGAAAGGGGAGGTATGTTATCGAACTCAATcg > 1:899711/1‑151 (MQ=255) cTCCCCTCGGCAGCGTGGGGTTTCGCGAACGCCGGCGCCGCCAAG‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTcgc < 2:614076/151‑1 (MQ=255) ccccccGGCTGCGTGGGGTTTCGAGCACGCCGGCCCCGCCACG‑GGGGGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGt < 1:3677044/151‑1 (MQ=255) ccccTCGGCAGCGTGGGGTTTGGAGCACCCCGGCGCCCCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGt < 1:9466206/151‑1 (MQ=255) cccTCGGCCGCGTGGGGTTGCGAGCCCGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTa < 2:6082361/151‑1 (MQ=255) cccTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑GGGCGGCGCCGGC‑GCACAACGAACC‑AAGGACCCAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGGGAGCGAACTCATTCGCGTa > 2:7432154/1‑151 (MQ=255) ccTCGCCAGCGTGGGGTTTCGCCCCCGCCGGCGCCGCCACG‑GGGGGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTAc < 1:5529738/151‑1 (MQ=255) cTCGGCCGCGTGGGGTTACGCGCACGCCGGCGCCGCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTGTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTAcc < 2:2910759/151‑1 (MQ=255) cTCGGCAGCGTGGGTTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTAcc < 2:11264527/151‑1 (MQ=255) gCAGCGTGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGAc < 2:6299689/151‑1 (MQ=255) aGCGAGGGGTTTCGAGCACGCCGGCGCCGCCCAC‑GGGCCGCGCCGGC‑TCACAACGAACC‑AACGACCAAAAGTATTTGTTTTTCGCGCCGCACCGCGGTGGTGGCACCTAAAAGGAGAGGAATTTGAGCGCACACATTCGCGTAACCGACaa > 2:3260701/1‑150 (MQ=255) aGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCCAAAGTGTTTGTTTTGCGCGCCGCACACCGGTGGTGGCACGGAATAGGAGAGGACTGTGAGCGAACAAAATCGCGGACCCGACaa > 2:2242551/1‑150 (MQ=255) gCGTGGGTTTTCGAGCACGCGGGCGCCGCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATc < 1:1766829/151‑1 (MQ=255) gCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCCGC‑TCCCAACGAACC‑AATGACCAAAATTAGTTGTTTTGCGCGCCGCACACCGGTGGTGGCACGTACAAGGAGAGGAATGTGAGCGAACACATTCGCGTACCCcacaac > 2:2762096/1‑149 (MQ=255) cgcggggTTTCGCCCACGCCGGCGCCGCCACC‑GGGGGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCg < 2:2975909/148‑1 (MQ=255) gtggggTTGCGAGCCCGCCGGCGCCGCCACG‑GGGGGGCCCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCgg < 1:7995874/149‑1 (MQ=255) gAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGAACAAAAGTCTGTGTTTTGGGCGCCCCACAGCGGTGGTGGCACGGAAAAGGAGAGGAATGTGTGCGAACTCATAAGCGTTCCCGAccaagg > 2:4082947/1‑146 (MQ=255) tgggtTTTCGAGCCCGCCGGCGCCCCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGc < 2:7792828/150‑1 (MQ=255) ggggtTTTCCCGCACGCCGGC‑CCCCCAACGGGGCGCCCCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGc < 1:5971022/150‑1 (MQ=255) gggTTTCGAGCACGCCGGCGCCCCCCCC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCaa < 1:9521374/151‑1 (MQ=255) ccACGCCGCCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAggg < 2:8831570/150‑1 (MQ=255) aCGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGGGCGCCGCACAGCGGTGGTGGCACGGAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGggtgggtg > 2:11574631/1‑151 (MQ=255) gCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAAAGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGaa > 2:10995457/1‑151 (MQ=255) ccGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAg > 2:1585891/1‑151 (MQ=255) ggCGCCGCCACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTc < 2:3128742/151‑1 (MQ=255) cgccAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTACAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGa > 1:1555959/1‑151 (MQ=255) ccACC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAgc < 2:8182582/151‑1 (MQ=255) ccACC‑GGGCGCCCCCGGC‑TCACAACGAACC‑AAGGACCAACAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAgc < 1:9978497/151‑1 (MQ=255) ccAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAgc > 1:6428033/1‑151 (MQ=255) aaC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAgctg > 2:2285240/1‑151 (MQ=255) | CTGGCCGATCGCGGCGATATCGAGCCGAAAGTGGTGGCCGAGGCCATCGCCAAGTACGGTATCGATCCGGAGAAGCGCAACCCGCTGGATTGCTAATTCGCTCCATACTCCCCTCGGCAGCGAGGGGTTTCGAGCACGCCGGCGCCGCCAAC‑GGGCGGCGCCGGC‑TCACAACGAACC‑AAGGACCAAAAGTCTTTGTTTTGCGCGCCGCACAGCGGTGGTGGCACGTAAAAGGAGAGGAATGTGAGCGAACTCATTCGCGTACCCGACATCGGCAACGGTGAGGGTGAAGTCATCGAGCTG > NC_008463/5910106‑5910405 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |