Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 3,515,863 T→C intergenic (+617/+267) PA14_RS16005 → / ← PA14_RS16010 AAA family ATPase/DUF4354 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084633,515,8630TC99.4% 1209.5 / NA 320intergenic (+617/+267)PA14_RS16005/PA14_RS16010AAA family ATPase/DUF4354 family protein
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base C (130/186);  minor base A (0/2);  total (132/188)
Fisher's exact test for biased strand distribution p-value = 5.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 320 total aligned reads displayed.

GTATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAA  >  NC_008463/3515715‑3516010
                                                                                                                                                      |                                                                                                                                                   
  ataCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAc                                                                                                                                                 >  2:9610834/1‑151 (MQ=255)
   taCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAcc                                                                                                                                                <  1:3350890/151‑1 (MQ=255)
    aCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAccc                                                                                                                                               <  1:10852450/151‑1 (MQ=255)
      aGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCa                                                                                                                                             >  2:6016141/1‑151 (MQ=255)
       gCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCaa                                                                                                                                            >  1:4388209/1‑151 (MQ=255)
        ccccTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCAACCCAAc                                                                                                                                           >  1:6024314/1‑151 (MQ=255)
        ccccTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAc                                                                                                                                           <  2:4107539/151‑1 (MQ=255)
        ccccTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAc                                                                                                                                           <  2:934524/151‑1 (MQ=255)
          cctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCCAccc                                                                                                                                         >  2:4493921/1‑151 (MQ=255)
          cctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAAGGTGGTGTTGGCCCTCACCCCAAacc                                                                                                                                         >  2:10540933/1‑151 (MQ=255)
           ctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCCACCCAAccca                                                                                                                                        >  2:2723888/1‑150 (MQ=255)
             ccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCctct                                                                                                                                      <  2:9217400/151‑1 (MQ=255)
             ccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCctct                                                                                                                                      <  1:5177151/151‑1 (MQ=255)
             ccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAACCctct                                                                                                                                      >  2:10234852/1‑151 (MQ=255)
                tAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTccc                                                                                                                                   <  2:10993660/151‑1 (MQ=255)
                  aGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGc                                                                                                                                 <  2:8561279/151‑1 (MQ=255)
                    ccATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCAc                                                                                                                               <  2:2399345/151‑1 (MQ=255)
                    ccATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCAc                                                                                                                               <  1:6937296/151‑1 (MQ=255)
                     cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCAcg                                                                                                                              <  1:3828025/151‑1 (MQ=255)
                      aTAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCAcgc                                                                                                                             >  2:10170625/1‑151 (MQ=255)
                         gCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCggg                                                                                                                          <  1:8249844/151‑1 (MQ=255)
                           ccTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGgag                                                                                                                        <  2:1698281/151‑1 (MQ=255)
                           ccTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCACTCCCCCAccccgggg                                                                                                                        >  1:8654527/1‑144 (MQ=255)
                            cTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCACCCACACCCCCCCCCGGggga                                                                                                                       >  1:1246030/1‑151 (MQ=255)
                            cTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCTCACCCGCACGCCGgaga                                                                                                                       >  2:1373283/1‑151 (MQ=255)
                             ttCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGagag                                                                                                                      <  1:8137452/151‑1 (MQ=255)
                               ccccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAggg                                                                                                                    <  2:9708362/151‑1 (MQ=255)
                                 ccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACAACCCCCCCCGGGAGAggggg                                                                                                                  >  1:10407690/1‑151 (MQ=255)
                                   aTACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCTCAACCGCACGCGGGAGAGGGGGcc                                                                                                                >  2:5577858/1‑151 (MQ=255)
                                     aCCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCgg                                                                                                              <  1:9238702/151‑1 (MQ=255)
                                      ccTGAACGGCACACCTATTGCCACCCGCAAAACCAGAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGGCCAAACCCCAACCCAAACCCCCCCCCGGGGAAGGGGGCCgg                                                                                                              >  1:10659673/1‑151 (MQ=255)
                                       cTGAACGGCACACCTCTTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGc                                                                                                            <  2:4033671/151‑1 (MQ=255)
                                       cTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACCACCCAAACCACACCCCCACCCGGGGGAGGGGGCCcggg                                                                                                            >  1:11583152/1‑150 (MQ=255)
                                       cTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTGTTGGAATGTGGTGTTGGCCCAGACCCCACACCGCACCCCCCCGCCGGCGAGGGgggcgggc                                                                                                            >  2:1951496/1‑151 (MQ=255)
                                            cGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGcc                                                                                                       <  1:3157533/151‑1 (MQ=255)
                                             ggCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGAAACCCCACCCACTCCCGCACCCGGGGGAGGGGGGCGGGGGTGCCt                                                                                                      >  2:3037688/1‑151 (MQ=255)
                                                acacCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTtgt                                                                                                   <  1:9364188/151‑1 (MQ=255)
                                                 cacCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACACCCCCACCCCGGGGGGGGGGCCGGGCGTGGCGtgtg                                                                                                  >  1:3407468/1‑151 (MQ=255)
                                                  acCTATTGCCACCCGCAAAACCACCACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTgg                                                                                                 <  2:9477475/151‑1 (MQ=255)
                                                  acCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTgg                                                                                                 <  1:1287922/151‑1 (MQ=255)
                                                   ccTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTggg                                                                                                <  1:10322302/151‑1 (MQ=255)
                                                   ccTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAAACCACACCCCCACGCGGGAGAGGGGGGCGGGCGGGACATGTggg                                                                                                >  1:5450146/1‑151 (MQ=255)
                                                     tATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCGTGTGGGTc                                                                                              >  2:10144678/1‑151 (MQ=255)
                                                      cttGCCACCCGCACAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCCCCCCAACCCTCTCCCGCCCGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCg                                                                                             <  2:3610650/150‑1 (MQ=255)
                                                      aTTGCCACCCGCAAAACCACAACCTCCCCCGCTGCAAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCg                                                                                             <  1:1653625/151‑1 (MQ=255)
                                                        tGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAACCCCAACCCTCACCCCCCCGCGGGAGAGGGGGCCGGGGGTGCCGTGTGGGTCGAg                                                                                           >  2:7980371/1‑151 (MQ=255)
                                                         gCCACCCGCAAAACCACACCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAgc                                                                                          <  1:1551976/151‑1 (MQ=255)
                                                          ccACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCAAACACCAAACCTCTCCCGCACGCGGGAGAGGGGGCCGGGGGGGCCTTGTGGGTCGAgcg                                                                                         >  2:5226631/1‑151 (MQ=255)
                                                           cACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCAAACCTCGACCCCCCGCGGGGGAGGGGGCCGGGCGTGCCGTGTGGGGCGGgcgc                                                                                        >  2:6397701/1‑151 (MQ=255)
                                                             cccGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCct                                                                                      <  2:2285809/151‑1 (MQ=255)
                                                                  aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctc                                                                                 <  1:5120943/151‑1 (MQ=255)
                                                                    caCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCgg                                                                               <  2:4205515/150‑1 (MQ=255)
                                                                    aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCAACCCACTGCCCCACCCGGGGGTGGGGGGCGGGCGGGCCGTGTGGGTGGTGAGCCTCGCGCgg                                                                               >  1:2127327/1‑151 (MQ=255)
                                                                    aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCgg                                                                               <  1:9698498/151‑1 (MQ=255)
                                                                      ccACAACCTCCCCCGCTGCTAACCGCAATAGCGGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCGCCCGCACGCCGGAGAGGGGGCCGGGCGGGCCGTGGGGGTCGAGCGCCTCGCGCGGgc                                                                             >  2:10331320/1‑151 (MQ=255)
                                                                          acccTCCCCCGCTGCTACCCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGTGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAg                                                                         <  1:11118293/149‑1 (MQ=255)
                                                                          aaCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATGGGTTTTTTGAATGTTGTGTTGGCCATCACCCCAACCCTCTCCCGCACGCGGGAGTGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAg                                                                         <  1:8015758/151‑1 (MQ=255)
                                                                               cccccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCCCCCCCCAAACCCCACCCGCCCCCGGGGGAGGGGGGCGGGCGGGGCGGGTGGGTGGGGCGCCGCCCGCGGGCGCAGCCAgg                                                                    >  1:5724334/1‑151 (MQ=255)
                                                                               cccccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTgg                                                                    <  1:1435592/151‑1 (MQ=255)
                                                                               cccccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTgg                                                                    <  1:4876706/151‑1 (MQ=255)
                                                                                 cccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTATTGGAATGTGGTGTTGGCCCACACCCCAAACCACTCCCCCACGCGGGCGAGGGGGCCGGGCGTGCCGGTTGGGTCGGTCGCCGCGCGCGGGCGCAGCCAGGaa                                                                  >  2:4399756/1‑151 (MQ=255)
                                                                                       gctAACCGCAATCGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCAAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGt                                                            <  1:3962157/151‑1 (MQ=255)
                                                                                       gctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGt                                                            <  2:4777215/151‑1 (MQ=255)
                                                                                        cgaaCCGCTATAGCTGCGGCTTGAGTCTCGCGGATCGGTTTTTGGAATGAGGTGATCGCCCTCCCCCCCCCCCGCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGACGAGCCCCTCGCTCGGGCGCAGCCTGGAACGATGTc                                                           <  2:7044220/149‑1 (MQ=255)
                                                                                          aaCCGCAATCGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTa                                                         <  1:1784874/151‑1 (MQ=255)
                                                                                           aCCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACAACCCAACCCACACCCCCACGCGGGAGAGGGGGGCCGGCGTGCCGGGTGGGTCGAGCGCCGCGCGCGGGCGCAGCCAGGAACGATTTCTaa                                                        >  1:2418131/1‑150 (MQ=255)
                                                                                              gCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAAACCACACCCCCACCCCGGGGAGGGGGCCCGGGGGGGCGTGTGGGTCGAGCGCCGCGCGCGGGCGCAGCCGGGGACGATGTATAccca                                                     >  1:10125674/1‑150 (MQ=255)
                                                                                              gCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCCACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCTCAGCCTGGAACGATGTCTAccat                                                     <  2:383505/151‑3 (MQ=255)
                                                                                              gCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCt                                                     <  1:9610834/151‑1 (MQ=255)
                                                                                                aaTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAACCACTCCCGCACGCGGGTGATGGGGCCGGGCGTGCCGTGTTGGTCGAGCGCCACGCAAGGGCGCAGCAGGGAAAGATGTATAACCtac                                                   >  2:8287014/1‑149 (MQ=255)
                                                                                                   aGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAAACCACTCCCCCACCCGGGAGAGGGGGCCGGGCGTGGCGTGTGGGTCGAGCGCCGCGCTCGGGCGCCGCCAGGAAAGATGTCAAACCAccccg                                                >  2:6472007/1‑150 (MQ=255)
                                                                                                       gCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGc                                            <  1:3647193/151‑1 (MQ=255)
                                                                                                         ggCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGccc                                          <  1:5789365/151‑1 (MQ=255)
                                                                                                          gCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGcccc                                         <  1:7463370/151‑1 (MQ=255)
                                                                                                             tGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCggg                                      <  2:6937255/151‑1 (MQ=255)
                                                                                                               aGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCGCTCAACCCCAACCAAAACCCCACGCCGGAGAGTGGGCCGGGCGTGCCTTGGGGGTAGACCGCCTCGCGAGGGCGCAGACGGGAACAATGTCTAACCAACCCCATGCCCCCGGTa                                    >  2:7575181/1‑151 (MQ=255)
                                                                                                                 tgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATc                                  <  1:9405026/151‑1 (MQ=255)
                                                                                                                  gtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCt                                 <  1:3224429/151‑1 (MQ=255)
                                                                                                                    cgcgGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTgg                               <  1:11063051/151‑1 (MQ=255)
                                                                                                                     gcgGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGa                              <  1:10008452/151‑1 (MQ=255)
                                                                                                                            ggTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGc                       <  2:845964/151‑1 (MQ=255)
                                                                                                                             gTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGcc                      <  2:5408320/151‑1 (MQ=255)
                                                                                                                              tttttGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGccc                     <  2:7431207/151‑1 (MQ=255)
                                                                                                                                  tGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccag                 <  1:661609/151‑1 (MQ=255)
                                                                                                                                    gAATGTGGTGTTGGCCCTCCCCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagcc               <  1:2951807/151‑1 (MQ=255)
                                                                                                                                     aaTGTGGTGTTGGCCATCACCCCAACCCTCTCCCGCTGGCGGGTGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagccc              <  1:7837158/151‑1 (MQ=255)
                                                                                                                                      aTGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagccca             <  1:2584879/151‑1 (MQ=255)
                                                                                                                                      aTGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagccca             <  2:6673281/151‑1 (MQ=255)
                                                                                                                                            tgtTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAAc       <  1:7652717/151‑1 (MQ=255)
                                                                                                                                             gtTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAAcc      <  2:3393994/151‑1 (MQ=255)
                                                                                                                                              ttGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCa     <  2:10755169/151‑1 (MQ=255)
                                                                                                                                               tGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGTGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaa    >  1:7335155/1‑151 (MQ=255)
                                                                                                                                               tGGCCCACACCCCAACCCTCTCACGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCACCCac    <  2:146345/151‑2 (MQ=255)
                                                                                                                                                 ggCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaa   <  2:2059223/151‑1 (MQ=255)
                                                                                                                                                 ggCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaa   >  2:5072767/1‑151 (MQ=255)
                                                                                                                                                  gCCCTCACCCCAACCCTCTCCCGCACGCGGGTGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa  <  1:2288825/151‑1 (MQ=255)
                                                                                                                                                  gCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa  <  1:2204126/151‑1 (MQ=255)
                                                                                                                                                  gCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa  <  2:8871283/151‑1 (MQ=255)
                                                                                                                                                  gCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa  <  2:11296615/151‑1 (MQ=255)
                                                                                                                                                  gCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa  <  2:11507012/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
GTATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAA  >  NC_008463/3515715‑3516010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: