BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_008463	2,362,330	A→C	pseudogene (139/252 nt)	oprI ←	outer membrane lipoprotei OprI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_008463	2,362,330	0	A	C	100.0%	1512.5 / NA	380	pseudogene (139/252 nt)	oprI	outer membrane lipoprotei OprI
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (191/189); total (191/189)

Only 100 of 380 total aligned reads displayed.

CCGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTAGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTGTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCC  >  NC_008463/2362182‑2362477

ccGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGt                                                                                                                                                   >  2:11126944/1‑151 (MQ=255)

 cGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTc                                                                                                                                                  >  2:2776692/1‑151 (MQ=255)

 cGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTc                                                                                                                                                  >  2:8311553/1‑151 (MQ=255)

 cGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTc                                                                                                                                                  <  2:6229763/151‑1 (MQ=255)

    gggACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAgc                                                                                                                                               >  1:192637/1‑151 (MQ=255)

     ggACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAgcg                                                                                                                                              >  1:11129410/1‑151 (MQ=255)

     ggACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAgcg                                                                                                                                              <  1:2922692/151‑1 (MQ=255)

     ggACCGGTTTTCAACAGGCCGTGAGACCTATTACTTGCGGCGGGCTTTTTCCCGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCTGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAgcg                                                                                                                                              <  2:6685184/151‑1 (MQ=255)

      gACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGTCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAgcgc                                                                                                                                             >  2:9003119/1‑151 (MQ=255)

        ccGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGa                                                                                                                                           >  2:8397418/1‑151 (MQ=255)

           gTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGcc                                                                                                                                        <  2:9273637/151‑1 (MQ=255)

           gTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGcc                                                                                                                                        >  1:178648/1‑151 (MQ=255)

            ttttCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCt                                                                                                                                       >  1:5303713/1‑151 (MQ=255)

              ttCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGa                                                                                                                                     <  1:864077/151‑1 (MQ=255)

              ttCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGACTGa                                                                                                                                     >  2:757680/1‑151 (MQ=255)

                cAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGc                                                                                                                                   >  2:10728643/1‑151 (MQ=255)

                   cAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACg                                                                                                                                >  1:6216128/1‑151 (MQ=255)

                   cAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACg                                                                                                                                >  2:2034625/1‑151 (MQ=255)

                      gTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTTCTTAGCTTAATGAGCAGAGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCATGAGCACTagc                                                                                                                             >  1:10100822/1‑151 (MQ=255)

                      gTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGagc                                                                                                                             <  2:9715201/151‑1 (MQ=255)

                        cGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGagcag                                                                                                                           >  1:10513879/1‑151 (MQ=255)

                         gTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGagcagc                                                                                                                          >  2:3605320/1‑151 (MQ=255)

                         gTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGagcagc                                                                                                                          <  2:11446624/151‑1 (MQ=255)

                         gTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGagcagc                                                                                                                          <  2:2347112/151‑1 (MQ=255)

                           gagaCCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTg                                                                                                                        <  2:4344466/151‑1 (MQ=255)

                            agaCCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCTTCAGCGCGAGACTGAGCACGAGCtgctgc                                                                                                                       >  2:8696768/1‑151 (MQ=255)

                              aCCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCgt                                                                                                                     <  1:276767/151‑1 (MQ=255)

                              aCCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCgt                                                                                                                     <  1:4344164/151‑1 (MQ=255)

                               ccTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCgtc                                                                                                                    >  1:7136086/1‑150 (MQ=255)

                                       ttGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAg                                                                                                            <  1:5633709/151‑1 (MQ=255)

                                         gCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCg                                                                                                          <  1:9168169/151‑1 (MQ=255)

                                          cGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCgg                                                                                                         >  1:9352805/1‑151 (MQ=255)

                                           ggctggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGt                                                                                                        <  1:4849900/151‑1 (MQ=255)

                                           ggctggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGt                                                                                                        <  1:683294/151‑1 (MQ=255)

                                           ggctggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGt                                                                                                        >  2:7273757/1‑151 (MQ=255)

                                           cgcgggctTTTTCCAGCTTGCGCAGGGCACGCCCGTGAGCATCGTCATCGGACTGCTGAGCTTTCAGCGCAGCGCCCAGAGCTGCGTCAGCCTTGCGATAGGCGTCGTCAGCGCGAGCCTGAGCACGCGCAGCTGCGTCTTCGGTAGCGGt                                                                                                        <  2:1538676/147‑1 (MQ=255)

                                              tggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAg                                                                                                     <  1:3726717/151‑1 (MQ=255)

                                              tggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAg                                                                                                     >  1:8212337/1‑151 (MQ=255)

                                              tggctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAg                                                                                                     <  2:7051775/151‑1 (MQ=255)

                                                gctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGAc                                                                                                   <  2:2430784/151‑1 (MQ=255)

                                                gctTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGAc                                                                                                   >  2:3994245/1‑151 (MQ=255)

                                                  tttttCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGa                                                                                                 >  2:3067676/1‑151 (MQ=255)

                                                    tttCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGc                                                                                               >  2:4701697/1‑151 (MQ=255)

                                                     ttCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCt                                                                                              <  1:5879789/151‑1 (MQ=255)

                                                      tCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCtt                                                                                             <  1:3368042/151‑1 (MQ=255)

                                                          gCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGt                                                                                         <  1:8979656/151‑1 (MQ=255)

                                                            aTGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGttt                                                                                       >  1:7521937/1‑151 (MQ=255)

                                                             tGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTc                                                                                      >  1:1654623/1‑151 (MQ=255)

                                                                gcAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCttt                                                                                   >  2:5793350/1‑151 (MQ=255)

                                                                 cAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTg                                                                                  >  1:5053078/1‑151 (MQ=255)

                                                                 cAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTg                                                                                  <  2:8892624/151‑1 (MQ=255)

                                                                      cACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTg                                                                             <  1:2181807/151‑1 (MQ=255)

                                                                      cACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTg                                                                             >  1:11443896/1‑151 (MQ=255)

                                                                         gCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGgct                                                                          <  1:7178878/151‑1 (MQ=255)

                                                                             gTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGctgctg                                                                      <  1:1242151/151‑1 (MQ=255)

                                                                               tAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCa                                                                    >  1:6013517/1‑151 (MQ=255)

                                                                                   cTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCg                                                                >  2:9202485/1‑151 (MQ=255)

                                                                                   cTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCg                                                                >  2:3357416/1‑151 (MQ=255)

                                                                                   cTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCg                                                                <  2:8577316/151‑1 (MQ=255)

                                                                                   cTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGACAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCg                                                                <  2:854405/151‑1 (MQ=255)

                                                                                    tCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCgg                                                               <  1:7017259/151‑1 (MQ=255)

                                                                                       tCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTgg                                                            >  1:11373951/1‑151 (MQ=255)

                                                                                       tCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTgg                                                            <  2:4964727/151‑1 (MQ=255)

                                                                                        cAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGc                                                           >  1:4161575/1‑151 (MQ=255)

                                                                                          gCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCa                                                         <  2:1184597/151‑1 (MQ=255)

                                                                                           ctgTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAg                                                        <  2:5538182/149‑1 (MQ=255)

                                                                                           cGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAg                                                        <  2:1030520/151‑1 (MQ=255)

                                                                                           cGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAg                                                        >  2:10436028/1‑151 (MQ=255)

                                                                                            ggTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGa                                                       <  2:440611/151‑1 (MQ=255)

                                                                                                  ctgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagca                                                 <  2:5231513/151‑1 (MQ=255)

                                                                                                   tgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagcag                                                >  1:2995739/1‑151 (MQ=255)

                                                                                                   tgAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAAcagcag                                                >  1:6161676/1‑151 (MQ=255)

                                                                                                    gAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACagcagc                                               <  1:4700445/151‑1 (MQ=255)

                                                                                                     aGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagcc                                              >  2:8821002/1‑151 (MQ=255)

                                                                                                     aGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagcc                                              <  2:6616096/151‑1 (MQ=255)

                                                                                                      gCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagcca                                             >  1:10956815/1‑151 (MQ=255)

                                                                                                       cTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccag                                            <  2:5357935/151‑1 (MQ=255)

                                                                                                            tGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCagccagagcca                                       <  2:1811812/151‑1 (MQ=255)

                                                                                                               gcagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGccagagccagag                                    <  2:2916128/151‑1 (MQ=255)

                                                                                                               gcagcGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGccagagccagag                                    <  1:11580302/151‑1 (MQ=255)

                                                                                                                        agagCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAAtt                           >  1:1114968/1‑151 (MQ=255)

                                                                                                                         gagCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAAttt                          <  2:9501422/151‑1 (MQ=255)

                                                                                                                          agCTTCGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTc                         <  2:789988/151‑1 (MQ=255)

                                                                                                                               cGTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAAc                    <  1:2418020/151‑1 (MQ=255)

                                                                                                                                gTCAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACg                   <  2:3221648/151‑1 (MQ=255)

                                                                                                                                  cAGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgtt                 <  1:954707/151‑1 (MQ=255)

                                                                                                                                   aGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGTATTTCAGAACgttg                >  1:5453465/1‑151 (MQ=255)

                                                                                                                                   aGCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttg                <  2:4853597/151‑1 (MQ=255)

                                                                                                                                    gCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttgt               >  1:9134454/1‑151 (MQ=255)

                                                                                                                                    gCCTTGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACgttgt               <  2:4163365/151‑1 (MQ=255)

                                                                                                                                       ttGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCa            <  1:10582130/151‑1 (MQ=255)

                                                                                                                                        tGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCAt           <  1:8397418/151‑1 (MQ=255)

                                                                                                                                        tGCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCAt           <  2:3686692/151‑1 (MQ=255)

                                                                                                                                         gCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATc          <  2:9864282/151‑1 (MQ=255)

                                                                                                                                         gCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATc          <  1:8058693/151‑1 (MQ=255)

                                                                                                                                         gCGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATc          <  2:6868285/151‑1 (MQ=255)

                                                                                                                                          cGATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCg         >  1:7698475/1‑151 (MQ=255)

                                                                                                                                           gATAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgt        >  1:6497148/1‑151 (MQ=255)

                                                                                                                                            aTAGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCgtg       <  1:6651537/151‑1 (MQ=255)

                                                                                                                                              aGGCTTCGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTCTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGtt     <  1:9890669/151‑1 (MQ=255)

CCGAGGGACCGGTTTTCAACAGGTCGTGAGACCTATTACTTGCGGCTGGCTTTTTCCAGCATGCGCAGGGCACGCTCGTTAGCCTCGTCAGCGGTCTGCTGAGCTTTCTGAGCAGCGCCCAGAGCTTCGTCAGCCTTGCGATAGGCTTAGTCAGCGCGAGCCTGAGCACGAGCAGCTGCGTGTTCGGTAGCGGTCAGACGAGCTTCGGTTTCTTTGGAGTGGCTGCTGCAACCGGTGGCCAGAACAGCAGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCC  >  NC_008463/2362182‑2362477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`