| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,787,777 | C→G | pseudogene (855/3090 nt) | PA14_RS13085 → | CusA/CzcA family heavy metal efflux RND transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,787,777 | 0 | C | G | 99.7% | 1527.2 / NA | 390 | pseudogene (855/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (187/202); minor base T (1/0); total (188/202) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 399 total aligned reads displayed.
TCGACGGCGTGCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCG > NC_008463/2787629‑2787924 | tCGACGGCGTGCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAggc > 2:10022893/1‑151 (MQ=255) cGACGGCGTGCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAggcg > 1:2945028/1‑151 (MQ=255) cGACGGCGTGCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAggcg < 1:8864275/151‑1 (MQ=255) gACGGCGTGCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCgg > 1:4755933/1‑151 (MQ=255) gTGCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGcc > 2:7308152/1‑151 (MQ=255) tGCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCa < 1:11222598/151‑1 (MQ=255) tGCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCa < 2:8000845/151‑1 (MQ=255) gCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGACGTGGCCCAGGCGGTCGGCCAg > 2:729112/1‑151 (MQ=255) gCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAg > 2:1337233/1‑151 (MQ=255) ccGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGACCGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAgc < 2:2116314/151‑1 (MQ=255) cGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAgcg > 1:2054788/1‑151 (MQ=255) cGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAgcg < 2:63146/151‑1 (MQ=255) ccGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTg < 1:1580454/151‑1 (MQ=255) gTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTgga < 1:5375382/151‑1 (MQ=255) gTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTgga > 1:3556512/1‑151 (MQ=255) tATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTggag < 1:7201471/151‑1 (MQ=255) aTCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTggagg < 1:3788825/151‑1 (MQ=255) cgACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATc < 2:11393449/151‑1 (MQ=255) gACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCa < 2:951622/151‑1 (MQ=255) cGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAAc < 1:8582622/151‑1 (MQ=255) gTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAAcc < 2:1447309/151‑1 (MQ=255) tCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCg < 2:1169837/151‑1 (MQ=255) cGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCgg < 2:3167417/151‑1 (MQ=255) cGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGAcc < 2:4132228/151‑1 (MQ=255) aGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCt < 2:11037675/151‑1 (MQ=255) aGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCt < 2:3402272/151‑1 (MQ=255) ggTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCGCTGGCGGTCGGCGAGCGCCTGGAGGTGATCAACCGGTCCCTg < 2:722098/151‑1 (MQ=255) cGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGc‑cc < 2:11492076/151‑1 (MQ=255) cGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCAGCGAAGTTGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCAAGCGCCTGGAGGAGATCAACCGGACCCTGc‑cc < 1:10869122/151‑1 (MQ=255) ggCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CC‑a > 2:2897681/1‑151 (MQ=255) ccTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CC‑aag > 2:5582575/1‑149 (MQ=255) cTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CC‑Aagg > 1:5601488/1‑151 (MQ=255) ggCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CC‑Aaggggg < 2:3279074/151‑2 (MQ=255) gCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CC‑Aagggggt < 1:4947643/151‑3 (MQ=255) aaGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCa > 1:7528017/1‑151 (MQ=255) aaGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCa > 1:5052733/1‑151 (MQ=255) aaGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCa > 1:269754/1‑151 (MQ=255) aaGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGAGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCAGCACA‑AGGGGGTCa > 2:7475060/1‑151 (MQ=255) gAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCaagg > 1:6276639/1‑148 (MQ=255) aGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGAGCAACCGGACCCTGC‑CCAAGGGGGTCaaggc > 2:4526035/1‑147 (MQ=255) tGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGAt < 2:10436308/151‑1 (MQ=255) gcgcACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATc < 1:1676545/151‑1 (MQ=255) aCCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCg < 1:6737041/151‑1 (MQ=255) aCCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCg < 1:9620124/151‑1 (MQ=255) ccGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGt < 2:7688837/151‑1 (MQ=255) cgcgGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTAc > 1:9112838/1‑151 (MQ=255) cgcgGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTAc < 2:9121151/151‑1 (MQ=255) cgGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCACCCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGa < 1:9837698/151‑1 (MQ=255) aCCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGca > 2:9685985/1‑151 (MQ=255) cGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGcacc > 2:9010109/1‑151 (MQ=255) cGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGcacc < 1:2413645/151‑1 (MQ=255) gagaACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGcacca > 2:2680152/1‑151 (MQ=255) gaACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCaccacc > 2:8862717/1‑151 (MQ=255) aaCGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCAccc < 1:3341470/151‑1 (MQ=255) cGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTg < 2:9615177/151‑1 (MQ=255) cGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTg < 2:4432445/151‑1 (MQ=255) ggCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTgg < 1:5865546/151‑2 (MQ=255) ggCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTgg < 2:6583509/151‑2 (MQ=255) ccGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtg < 2:8585962/151‑4 (MQ=255) cgcgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtgg < 1:6231617/151‑5 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCTGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac < 2:611285/151‑7 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac < 2:5135877/151‑7 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac < 1:7607787/151‑7 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac > 2:8453568/1‑145 (MQ=255) cgAAGTGGTGCACGGCACGGTGTTCATGCTGCTCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGAACAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACCACCGCACCACCCTggtggac < 2:6921778/151‑7 (MQ=255) aTGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaaga < 1:6495191/151‑1 (MQ=255) gCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAc < 1:7732356/151‑1 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcct > 1:8444812/1‑150 (MQ=255) aTCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctgg > 2:10237874/1‑148 (MQ=255) aTCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctgg > 1:1276348/1‑148 (MQ=255) aTCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGGCAAGGCGATCACCGTCTACGACCGCACCCCCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctgg < 2:8158551/151‑4 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctggt < 2:7267939/151‑5 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctggt > 2:3844419/1‑147 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg > 1:1047154/1‑151 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg > 2:4970934/1‑151 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGAACGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg > 2:3579120/1‑151 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGGGGCCACG‑GTGAAGAAGAA‑CCGGGTGGaa > 1:11363815/1‑151 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGaa < 1:10021710/151‑1 (MQ=255) agaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAgg < 2:488980/151‑1 (MQ=255) agaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAgg > 2:6673776/1‑151 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggc > 2:6715355/1‑151 (MQ=255) cAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcg < 1:2568470/151‑1 (MQ=255) cAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcg < 1:3202179/151‑1 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcgg < 1:4417183/151‑1 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGCAGAAGAA‑CCTGGTGGAAggcgcggc > 1:5270435/1‑151 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggc < 2:10738038/151‑1 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggc < 2:8255732/151‑1 (MQ=255) ccGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcg < 1:7968473/151‑1 (MQ=255) ccGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcg > 1:10646213/1‑151 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcgc < 1:7512225/151‑1 (MQ=255) ggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTg < 1:5442387/151‑1 (MQ=255) gAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCCCCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTgg > 1:6340160/1‑151 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTg < 1:11115715/151‑1 (MQ=255) gTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCTGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGa < 2:9376371/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc > 1:9291483/1‑151 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 2:2374468/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 2:3073676/151‑1 (MQ=255) gCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcg > 2:10874877/1‑151 (MQ=255) cccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgc < 2:5857542/151‑1 (MQ=255) ccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgcg < 1:2917471/151‑1 (MQ=255) | TCGACGGCGTGCCGATCCGTATCCGCGACGTCGCCGAGGTCGGCCTGGGCAAGGAGCTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGC‑CC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCG > NC_008463/2787629‑2787924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |