| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,787,829 | 2 bp→AG | pseudogene (907‑908/3090 nt) | PA14_RS13085 → | CusA/CzcA family heavy metal efflux RND transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,787,829 | 0 | C | A | 100.0% | 1570.0 / NA | 380 | pseudogene (907/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (164/216); total (164/216) | |||||||||||
| * | NC_008463 | 2,787,830 | 0 | T | G | 99.7% | 1460.2 / NA | 380 | pseudogene (908/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (164/215); minor base C (0/1); total (164/216) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 380 total aligned reads displayed.
CTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACC > NC_008463/2787685‑2787975 || tGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGAt < 2:10436308/151‑1 (MQ=255) ccGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGt < 2:7688837/151‑1 (MQ=255) cGGCGCGGCCACCGAGAACGGCCTCGAAGTGGTGCTCGGCACGGTGGTCGTGCTGATCGGCGTGAACAGCCGGGAGGTGGCCCAGGCGGTCGGCCAGCGGCTGGCGGTGATCAACCGGAACAGG‑GCCA‑AGGGGGTCAAGGCGATCACCGTc > 2:8247565/1‑151 (MQ=255) gcgcGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTa < 2:8876205/151‑1 (MQ=255) cGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGcacc < 1:2413645/151‑1 (MQ=255) gagaACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGcacca > 2:6595330/1‑151 (MQ=255) agaACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCTAGGCGATCACCGTCTACGACCGcaccac > 2:10011922/1‑151 (MQ=255) ccGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtg < 2:8585962/151‑4 (MQ=255) cgcgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtgg > 1:6288642/1‑147 (MQ=255) cgcgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtgg < 1:6231617/151‑5 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCTGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac < 2:611285/151‑7 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac < 2:5136703/151‑7 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac < 1:7607787/151‑7 (MQ=255) cgAAGTGGTGCACGGCACGGTGTTCATGCTGCTCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGAACAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACCACCGCACCACCCTggtggac < 2:6921778/151‑7 (MQ=255) gAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggaca > 2:6383311/1‑144 (MQ=255) tGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaagaa > 1:6499425/1‑151 (MQ=255) tGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaagaa > 2:5617388/1‑151 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcct < 2:11625607/151‑2 (MQ=255) gATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctg < 2:9062770/151‑3 (MQ=255) ctCGGCGAGCACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑CCCCTGGCCA‑AGCGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGTTGGTCAAGG‑CCGTGGCCACGGTGAAGAAGAAcctgg < 2:8158520/150‑4 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctggt < 2:10191397/151‑5 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACCAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg > 1:1046716/1‑151 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGaa < 1:10021710/151‑1 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGaa < 1:11286733/151‑1 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAg < 1:16512/151‑1 (MQ=255) agaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAgg > 1:850538/1‑151 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggc > 2:6715355/1‑151 (MQ=255) aaCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcg > 1:10544698/1‑151 (MQ=255) cAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcg < 1:3211753/151‑1 (MQ=255) cAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcg < 1:2568470/151‑1 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcgg < 1:5422548/151‑1 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggc < 2:7273214/151‑1 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggc < 2:10738038/151‑1 (MQ=255) ccGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcg < 1:7968473/151‑1 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcgc > 2:7232041/1‑151 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcgc < 1:7512225/151‑1 (MQ=255) ggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTg < 1:5442387/151‑1 (MQ=255) gAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTgg > 2:873323/1‑151 (MQ=255) aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGt < 2:3363263/151‑1 (MQ=255) aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGt < 1:889571/151‑1 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTg > 2:1875037/1‑151 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTg < 1:11115715/151‑1 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTg > 1:4661254/1‑151 (MQ=255) gTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCTG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGa < 2:9376371/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 2:9526504/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc > 2:3523355/1‑151 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 2:3073676/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 2:2374468/151‑1 (MQ=255) gCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcg > 2:10874877/1‑151 (MQ=255) cccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgc < 1:6601234/151‑1 (MQ=255) ccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgcg < 1:2917471/151‑1 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGCA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg < 1:11467853/148‑1 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg > 1:7733386/4‑151 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 2:4133979/149‑1 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTg < 2:4314234/150‑1 (MQ=255) cgGTCGGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGct < 1:4836923/151‑1 (MQ=255) tcggCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCtt < 2:2757267/148‑1 (MQ=255) cggCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGAGCTCTTc > 2:256183/3‑151 (MQ=255) ggCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACCAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTcc > 2:5221058/2‑151 (MQ=255) ccAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTg > 2:4485767/1‑151 (MQ=255) cAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt > 1:4107886/1‑151 (MQ=255) cAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt > 2:3264421/1‑151 (MQ=255) aGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt < 1:9218580/151‑1 (MQ=255) gcgcCTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTc < 1:4778136/151‑1 (MQ=255) ccTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTc > 2:7909706/1‑151 (MQ=255) ccTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTc < 1:5284132/151‑1 (MQ=255) cTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg > 2:7435480/1‑151 (MQ=255) cTGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg < 1:1393602/151‑1 (MQ=255) tGGAGGAGATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCgg < 1:10686988/151‑1 (MQ=255) aggagATCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCaa < 1:1862849/151‑1 (MQ=255) ggagATCACCCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAG‑ACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAAc < 2:9120545/151‑1 (MQ=255) gagaTCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACa > 2:1792462/1‑151 (MQ=255) gaTCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc < 1:9865821/151‑1 (MQ=255) aTCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc < 1:4221113/151‑1 (MQ=255) aTCAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGGGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc < 1:4415476/151‑1 (MQ=255) cAACCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgc < 1:714820/151‑1 (MQ=255) aaCCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcg > 2:4791187/1‑151 (MQ=255) aCCGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgc > 1:3343568/1‑151 (MQ=255) ccGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 1:9795115/151‑1 (MQ=255) ccGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 1:2055840/151‑1 (MQ=255) ccGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGGTCCTCGGCAACATCcgcgcg > 2:4998988/1‑151 (MQ=255) cGG‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcgg < 2:3945857/151‑1 (MQ=255) gg‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcggc < 1:9118150/151‑1 (MQ=255) gg‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcggc > 1:6030291/1‑151 (MQ=255) gg‑ACCCT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcggc > 1:6379058/1‑151 (MQ=255) cccT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCt < 2:2944942/151‑1 (MQ=255) ccT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCCCG‑GTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTg > 2:11440758/1‑151 (MQ=255) ccT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTg > 1:3062615/1‑151 (MQ=255) cT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGa > 2:3791467/1‑151 (MQ=255) cT‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGa > 2:10241580/1‑151 (MQ=255) t‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt < 1:180377/151‑1 (MQ=255) t‑GCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt > 1:2492166/1‑151 (MQ=255) gcccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATc < 2:9660134/146‑1 (MQ=255) cccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCa < 1:8086364/147‑1 (MQ=255) ccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAATG‑CCGTGGCCACGGTGTAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACTTCCGCGCGGCGCTGATCAc < 1:9347744/148‑1 (MQ=255) aGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGc > 1:676777/1‑151 (MQ=255) gggggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGcc > 1:11612546/1‑151 (MQ=255) ggggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGcca < 2:1400649/151‑1 (MQ=255) ggggTCAAGGCGAGCTCCGTCTACGACCGCACCACCCTTGTGGACCAGGCCGGGGCCACG‑GTTCAGGAGAA‑CCTGGTGGCAGCCGCCCGGCGTGAGCTCCCGGAGCTCTTCCTGGTCCTCGGCAACAACCGCGCGGCGCTGATCACCGcca < 2:1295737/151‑1 (MQ=255) gggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccac < 2:11528972/151‑1 (MQ=255) || CTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGG‑ACCCT‑GCCC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACC > NC_008463/2787685‑2787975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |