Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 5,198,405 T→C intergenic (+31/+37) PA14_RS23800 → / ← mdpA ABC transporter substrate‑binding protein/metallopeptidase MdpA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084635,198,4050TC99.5% 1546.4 / NA 394intergenic (+31/+37)PA14_RS23800/mdpAABC transporter substrate‑binding protein/metallopeptidase MdpA
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base C (205/186);  minor base G (1/1);  total (207/187)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 399 total aligned reads displayed.

GATGCCCTGGTTGCCGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCTTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGCCGAACTCGCC  >  NC_008463/5198257‑5198552
                                                                                                                                                    |                                                                                                                                                   
 aTGCCCTGGTTGCCGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTg                                                                                                                                                  <  2:9066820/151‑1 (MQ=255)
 aTGCCCTGGTTGCCGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTg                                                                                                                                                  <  1:3081173/151‑1 (MQ=255)
        ggTTGCCGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTccc                                                                                                                                           <  1:6022070/151‑1 (MQ=255)
         gTTGCCGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCcg                                                                                                                                          <  1:2343838/151‑1 (MQ=255)
          ttGCCGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCcgc                                                                                                                                         <  1:9230279/151‑1 (MQ=255)
           tGCCGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCcgcg                                                                                                                                        <  1:6594154/151‑1 (MQ=255)
           tGCCGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCATGCCGTCCcgcg                                                                                                                                        >  1:4243808/1‑151 (MQ=255)
             ccGCTGGCGCATCCGTTGATTTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTAGGCGCGGGACTTTTCGCGGGTGAAGCTGNACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTg                                                                                                                                      <  1:6101880/151‑1 (MQ=255)
              cGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGGgc                                                                                                                                     >  1:769051/1‑151 (MQ=255)
               gCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTgcg                                                                                                                                    <  1:1627190/151‑1 (MQ=255)
                 tGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTgcggc                                                                                                                                  >  1:5003024/1‑151 (MQ=255)
                 tGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTgcggc                                                                                                                                  >  2:5541666/1‑151 (MQ=255)
                  ggCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTgcggcg                                                                                                                                 <  1:9965816/151‑1 (MQ=255)
                    cgcATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGtt                                                                                                                               <  1:4784441/151‑1 (MQ=255)
                     gcATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACCCGGGCAGCCCAGGCCCATGCCATCCCGCGTGCGGCGTTa                                                                                                                              >  1:5896036/1‑151 (MQ=255)
                      cATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCTCGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTAt                                                                                                                             >  2:8246426/1‑151 (MQ=255)
                      cATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTAt                                                                                                                             <  2:2678735/151‑1 (MQ=255)
                       aTCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTagc                                                                                                                            >  2:3534303/1‑149 (MQ=255)
                       aTCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCATGCCTTCCCGCGTGCGGCGTTATc                                                                                                                            >  1:3498641/1‑151 (MQ=255)
                             tGATGTTCGACGCGCAACGCAAGTACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCAGCTCGCGGGAAGCCCTGGCCCTTGCCTTCCAGCGGGCGGCGTGATCGTTcgg                                                                                                                      >  2:7858142/1‑151 (MQ=255)
                               aTGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTcggcc                                                                                                                    <  1:6438321/151‑1 (MQ=255)
                                  ttCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTcggccggc                                                                                                                 >  2:4925244/1‑151 (MQ=255)
                                  ttCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTcggccggc                                                                                                                 <  1:6496815/151‑1 (MQ=255)
                                  ttCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTcggccggc                                                                                                                 >  1:9382336/1‑151 (MQ=255)
                                   tCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTAACGTTCGGCCGGCt                                                                                                                >  2:4632207/1‑151 (MQ=255)
                                     gACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCa                                                                                                              <  1:6956069/151‑1 (MQ=255)
                                       cgcgCAACGCAAGAACGTCAGCGGCTACCGCATGATCCCGATGTCGGCGAGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCAGGCCCTTTCCTTACCGCGTGCGGCGTTATAGTTCGGCCGGCGCAgc                                                                                                            >  1:7174172/1‑151 (MQ=255)
                                       cgcgCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGTAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGGTATCGTTCGGCCGGCTCAgc                                                                                                            >  1:10155502/1‑151 (MQ=255)
                                          gcaacgcaaGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCCGGAATCCCTGGCCCTTGGCTTCCCGCGGGCCGCGTTATCCTTCGGACGGCTCAgccgc                                                                                                         >  1:10978218/1‑151 (MQ=255)
                                           catcgcacGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGGGACGCTGGGGTGATCGCTGCGCCGCTCGCGGGCCGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGGTTTCGTTCGGCCGGCTCAgccgcc                                                                                                        >  2:5845369/4‑151 (MQ=255)
                                              cgcaaGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAg                                                                                                     <  1:10884885/151‑1 (MQ=255)
                                              cgcaaGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTAGCGGGGGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAg                                                                                                     >  2:1911590/1‑151 (MQ=255)
                                              cgcaaGAACGACAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCGTGCCTTCCCGCGTGCGGCGTGATCGTTCGGCCGGCTCAGCCGCCGAg                                                                                                     >  2:4391752/1‑151 (MQ=255)
                                               gcaaGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAgg                                                                                                    >  1:7327237/1‑151 (MQ=255)
                                                caaGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGc                                                                                                   >  2:934655/1‑151 (MQ=255)
                                                   gAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGa                                                                                                <  2:8754634/151‑1 (MQ=255)
                                                    aaCGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGaa                                                                                               <  2:6179283/151‑1 (MQ=255)
                                                    aaCGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCAGGCCCGTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGaa                                                                                               >  1:1183077/1‑151 (MQ=255)
                                                       gTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAggg                                                                                            >  2:9602755/1‑151 (MQ=255)
                                                           gCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGAtcg                                                                                        <  1:11509110/151‑1 (MQ=255)
                                                             ggCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGAtcgtc                                                                                      <  1:4571259/151‑1 (MQ=255)
                                                               cTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGa                                                                                    >  1:9437682/1‑151 (MQ=255)
                                                                tACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTAGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGAt                                                                                   >  1:5444601/1‑151 (MQ=255)
                                                                 aCCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCATGCCGTCCCGCGTGCGGCGGTATAGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGCTCGTCGATg                                                                                  >  1:7935338/1‑151 (MQ=255)
                                                                  ccGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATgg                                                                                 <  1:5363011/151‑1 (MQ=255)
                                                                      aTGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATggacgg                                                                             >  2:3811599/1‑151 (MQ=255)
                                                                       tGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATggacgga                                                                            <  2:5113538/151‑1 (MQ=255)
                                                                       tGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATggacgga                                                                            >  2:7014554/1‑151 (MQ=255)
                                                                       tGAGCCCGATGACGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCATGCCTACCCGCGTGCGGCGTAATCGTTCGGCCGGCACAGCCGCCGAGGCCGAAGGGATCGTCGATggacgga                                                                            >  2:6372451/1‑151 (MQ=255)
                                                                          gCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTc                                                                         <  2:10282052/151‑1 (MQ=255)
                                                                           cccGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCg                                                                        >  2:8068143/1‑151 (MQ=255)
                                                                            ccGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTTCCATCCCGCGTGCCGCGTTATCGTTAGGCCGGCTCAGCCGCCGAGGCCGAAGGGTTCGTCGATGGACGGACTCgg                                                                       >  1:5107908/1‑151 (MQ=255)
                                                                             cgctGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGt                                                                      <  1:8617987/148‑1 (MQ=255)
                                                                             cGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGt                                                                      >  2:10945305/1‑151 (MQ=255)
                                                                              gATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGTCTCGGtt                                                                     >  1:8448769/1‑151 (MQ=255)
                                                                               aTGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTg                                                                    <  1:8835238/151‑1 (MQ=255)
                                                                               aTGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTg                                                                    >  1:11324278/1‑151 (MQ=255)
                                                                                       gcgGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAAcc                                                            <  1:2617316/151‑1 (MQ=255)
                                                                                       gcgGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAAcc                                                            <  2:4170086/151‑1 (MQ=255)
                                                                                        cgGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGTAccc                                                           >  2:10880094/1‑150 (MQ=255)
                                                                                        cgGGACTTGTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCGTGCCTTCCCGCGTGCGGCGTGATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCa                                                           <  2:5994581/151‑1 (MQ=255)
                                                                                            aCTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGt                                                       <  2:750813/151‑1 (MQ=255)
                                                                                             cTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCCCGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTg                                                      <  2:1250843/151‑1 (MQ=255)
                                                                                             cTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACCCGGGAAGCCCTGGCCCGTTCCATCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCATCCGCCGAGGCCGAAGGGATCGTCGATGGAAGGACGAGGTTGGGTGGACCAGCGTg                                                      >  1:817085/1‑151 (MQ=255)
                                                                                               tttCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGt                                                    <  1:5652794/151‑1 (MQ=255)
                                                                                                  cgcgGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGtcct                                                 >  2:1558790/1‑151 (MQ=255)
                                                                                                  cgcgGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGtcct                                                 <  1:2728508/151‑1 (MQ=255)
                                                                                                  cgcgGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGtcct                                                 <  1:5577167/151‑1 (MQ=255)
                                                                                                      ggTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGtccttcct                                             >  2:5748556/1‑151 (MQ=255)
                                                                                                       gTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCGTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTtcctc                                            <  1:2190360/151‑1 (MQ=255)
                                                                                                         gAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCTCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTACTTCCTCCg                                          >  2:8427732/1‑151 (MQ=255)
                                                                                                         gAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCg                                          <  1:10387225/151‑1 (MQ=255)
                                                                                                               ggACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGt                                    <  1:3346887/151‑1 (MQ=255)
                                                                                                                gACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTa                                   <  1:6864983/151‑1 (MQ=255)
                                                                                                                gACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTACGTCATGTa                                   >  2:11138923/1‑151 (MQ=255)
                                                                                                                gACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGGGGTCCTTCCTCCGTCATGTa                                   >  2:9854381/1‑151 (MQ=255)
                                                                                                                 aCTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGGGGGGCGTTTTCGTTCGGCCGGCTCAGGCGCCGAGGCCGAACGGATGGTCGATGGACGGTCTCGGTTGGGTGAAGCAGCGTGGTCCGTCCTCCGTCTTGTAg                                  >  2:6074803/1‑151 (MQ=255)
                                                                                                                   tGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGaa                                <  2:7231310/151‑1 (MQ=255)
                                                                                                                    gagcGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAg                               <  1:10686866/148‑1 (MQ=255)
                                                                                                                     aTCGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGt                              <  1:3715844/151‑1 (MQ=255)
                                                                                                                       cGCTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCGCCGTCATGTAGAAGTGa                            >  2:11316121/1‑151 (MQ=255)
                                                                                                                         cTGCGCCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGAtc                          <  2:3127298/151‑1 (MQ=255)
                                                                                                                          tGCGCCGCACGCGGGAAGCCCAGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGAtcc                         >  1:416674/1‑151 (MQ=255)
                                                                                                                           gcgcCGCACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGAtcct                        <  1:3988320/151‑1 (MQ=255)
                                                                                                                                 cACGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGc                  >  2:4735432/1‑151 (MQ=255)
                                                                                                                                  aCGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCg                 >  1:10028237/1‑151 (MQ=255)
                                                                                                                                  aCGCGGGAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCg                 >  2:662669/1‑151 (MQ=255)
                                                                                                                                      gggAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGACCCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATg             >  2:11391683/1‑151 (MQ=255)
                                                                                                                                      gggAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATg             >  2:10133754/1‑151 (MQ=255)
                                                                                                                                      gggAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATg             >  1:329700/1‑151 (MQ=255)
                                                                                                                                      gggAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATg             >  1:9665339/1‑151 (MQ=255)
                                                                                                                                       ggAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGc            <  1:199463/151‑1 (MQ=255)
                                                                                                                                        gAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGcc           >  1:1447145/1‑151 (MQ=255)
                                                                                                                                        gAAGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGcc           <  1:9013487/151‑1 (MQ=255)
                                                                                                                                          aGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGCCGa         <  1:5936398/151‑1 (MQ=255)
                                                                                                                                          aGCCCTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGCCGa         >  2:262943/1‑151 (MQ=255)
                                                                                                                                            cccTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGCCGAAc       >  2:7783120/1‑151 (MQ=255)
                                                                                                                                              cTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGCCGAACTc     <  2:5428097/151‑1 (MQ=255)
                                                                                                                                              cTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGCCGAACTc     <  1:3851021/151‑1 (MQ=255)
                                                                                                                                              cTGGCCCTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGCCGAACTc     <  1:11118586/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GATGCCCTGGTTGCCGCTGGCGCATCCGTTGATGTTCGACGCGCAACGCAAGAACGTCAGCGGCTACCGCATGAGCCCGATGTCGGCGCGGGACTTTTCGCGGGTGAAGCTGGACTGATCGCTGCGCCGCACGCGGGAAGCCCTGGCCTTTGCCTTCCCGCGTGCGGCGTTATCGTTCGGCCGGCTCAGCCGCCGAGGCCGAAGGGATCGTCGATGGACGGACTCGGTTGGGTGAACCAGCGTGGTCCTTCCTCCGTCATGTAGAAGTGATCCTCCAGGCGAATGCCGAACTCGCC  >  NC_008463/5198257‑5198552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: