Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 966,217 T→C intergenic (+77/‑568) PA14_RS04485 → / → PA14_RS04490 fimbrial protein/response regulator transcription factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_008463966,2170TC100.0% 1776.0 / NA 454intergenic (+77/‑568)PA14_RS04485/PA14_RS04490fimbrial protein/response regulator transcription factor
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (220/234);  total (220/234)

Only 100 of 458 total aligned reads displayed.

TCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTTGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGG  >  NC_008463/966070‑966364
                                                                                                                                                   |                                                                                                                                                    
 cGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTATACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCATCCCTCGCGa                                                                                                                                                  >  2:1704636/1‑151 (MQ=255)
   gcgcGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAg                                                                                                                                                >  2:1526328/1‑151 (MQ=255)
      cgGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCGTTCGCGCCAGCCCTCGCGAAGGCt                                                                                                                                             >  2:3518443/1‑151 (MQ=255)
         aGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCgg                                                                                                                                          >  1:10525337/1‑151 (MQ=255)
           ggCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGcc                                                                                                                                        <  1:9420601/151‑1 (MQ=255)
                aTTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCa                                                                                                                                   <  2:7637234/151‑1 (MQ=255)
                     aGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTcc                                                                                                                              <  1:6441511/151‑1 (MQ=255)
                          ggggTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCCGTgg                                                                                                                         >  1:4592887/1‑151 (MQ=255)
                             gTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTg                                                                                                                      <  1:4954026/151‑1 (MQ=255)
                               cGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCa                                                                                                                    >  2:1267484/1‑151 (MQ=255)
                                gCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGccg                                                                                                                   >  1:5532321/1‑149 (MQ=255)
                                   gACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTTCAGATc                                                                                                                >  1:747109/1‑151 (MQ=255)
                                    aCGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCaaaacg                                                                                                               >  1:6498467/1‑146 (MQ=255)
                                     cGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGc                                                                                                              >  1:6230479/1‑151 (MQ=255)
                                     cGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCGCCAGTGGTTGCAGATCGc                                                                                                              >  1:1992284/1‑151 (MQ=255)
                                      ggCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGcc                                                                                                             <  1:4019096/151‑1 (MQ=255)
                                       gcgcCGCCGCGTCCACGAGGACCGTCCCCTGAGCGGCGCCGCCGCACTTGCCCCGGCGTGTCCCGCCCCGCCTCGGGAAGCGCCGGCGGCCGCGTTCGCGCCAGCCCTCGCGAAGGCACGGCCCCTCACCTCCCGGGGTTGCAGATCGCCg                                                                                                            <  2:9090228/151‑1 (MQ=255)
                                        cgccgcCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCgc                                                                                                           >  1:6132825/1‑150 (MQ=255)
                                          ccgccgAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAg                                                                                                         >  1:8508213/1‑151 (MQ=255)
                                               gAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGGGGTTGCAGATCGCCGAAGGCGct                                                                                                    >  2:8554169/1‑151 (MQ=255)
                                                    cACGTTTTCCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCCGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGAGATAGCCGACGGCGCTCTggc                                                                                               >  1:7046246/1‑149 (MQ=255)
                                                     aCGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTTCAGATCGCCGAAGGCGCTCTGCat                                                                                              >  1:3682970/1‑151 (MQ=255)
                                                       gTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCatat                                                                                            <  1:5683769/151‑1 (MQ=255)
                                                       gTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCatat                                                                                            <  2:6732160/151‑1 (MQ=255)
                                                       gTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCAGCaaat                                                                                            >  2:2181831/1‑151 (MQ=255)
                                                        tttACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATc                                                                                           >  2:2558596/1‑151 (MQ=255)
                                                           aCCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCt                                                                                        <  2:10176766/151‑1 (MQ=255)
                                                            ccTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGAGATCGCCGAAGGCGCTCTGCATATCGcgc                                                                                       >  1:8203198/1‑149 (MQ=255)
                                                            ccTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGTCGCTCTGCATATCGCTc                                                                                       >  2:11477064/1‑151 (MQ=255)
                                                            ccTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTc                                                                                       <  2:8303010/151‑1 (MQ=255)
                                                            ccTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTc                                                                                       <  2:2474164/151‑1 (MQ=255)
                                                            ccTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGGGGTTGCAGATCGCCCAAGGCGCTCTGCATATCGcgc                                                                                       >  1:5882338/1‑149 (MQ=255)
                                                                ccccTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCCGATCGCCGAAGGCGCGCTGCCGATCGCGCCgct                                                                                   >  1:9265509/1‑151 (MQ=255)
                                                                ccccTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCgct                                                                                   <  2:8815741/151‑1 (MQ=255)
                                                                 cccTGAGCGGCGCCGCCGCTCATTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATAGCTCCgctg                                                                                  >  2:3037227/1‑151 (MQ=255)
                                                                  ccTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGAGATAGCCGAACGCGCACTGCAGATTCCTCCgcggg                                                                                 >  1:9002939/1‑148 (MQ=255)
                                                                   cTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCgctgct                                                                                >  1:11390041/1‑151 (MQ=255)
                                                                   cTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCACTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCgctgct                                                                                <  1:678574/151‑1 (MQ=255)
                                                                    tGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTc                                                                               <  1:10988342/151‑1 (MQ=255)
                                                                      aGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCTCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCGCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTGTGCATATCGCTCCgctggtggg                                                                             >  2:2337856/1‑146 (MQ=255)
                                                                      aGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGt                                                                             <  2:10653780/151‑1 (MQ=255)
                                                                       gcggcgCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCGCGGGAAGCGCCGTCGGCCGCTTTAGCGCCAGCCCTCGCGAAGGATCGGCCCCTCACCTCCAGGGGTTGCAGATCGCCCTAGGCGGAGAGCATATCGCTACGCAGgtcgtc                                                                            >  2:5480619/1‑151 (MQ=255)
                                                                       gcggcgCCGCCGCTCTTTCCCCGGCGTGGCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTc                                                                            <  1:9567678/151‑1 (MQ=255)
                                                                         ggcgCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCt                                                                          <  1:2125751/151‑1 (MQ=255)
                                                                          gcgcCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTg                                                                         <  1:7726625/151‑1 (MQ=255)
                                                                            gccgccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGAGATCGGCGAAGGCGCGCTGCATAAAGCACCGCAGCTCGTGCgggg                                                                       >  1:7916448/1‑151 (MQ=255)
                                                                            gccgccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTggg                                                                       <  1:2982298/151‑1 (MQ=255)
                                                                            gccgccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATAGCTCCGCTGCTCGTCCTggg                                                                       >  2:6179750/1‑151 (MQ=255)
                                                                            cccgccgcACTGCCCCCGCCGGGTCCCGCCCCGCCTCGGGACGCGCCGACGGCCGCGTTCGCGCCAGCCCTCGCGACGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTggg                                                                       <  2:10702520/150‑1 (MQ=255)
                                                                                ccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtctc                                                                   <  2:4284398/151‑1 (MQ=255)
                                                                                ccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtctc                                                                   <  1:1003198/151‑1 (MQ=255)
                                                                                 cgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCg                                                                  <  2:8743930/151‑1 (MQ=255)
                                                                                 cgcTCTTTCCCCGGCGTGTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCg                                                                  <  1:3222096/151‑1 (MQ=255)
                                                                                  gcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGt                                                                 <  1:11007693/151‑1 (MQ=255)
                                                                                   ctctTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATTTCGCTCCGCGGCTCGTCCGGGGTCTCGTg                                                                >  1:11189439/1‑151 (MQ=255)
                                                                                    tctTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTTCAGATCGACGAAAGCGCAATGCATATAGCTCCGCGGCTCGGGCGGGGTCACGGgc                                                               >  2:1955438/1‑151 (MQ=255)
                                                                                      tttCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTgcgc                                                             <  1:3337874/151‑1 (MQ=255)
                                                                                      tttCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCGGAGCATATCGCTCCGCTGCTCGTGCGGGGTCTCGTgcgc                                                             >  1:10243924/1‑151 (MQ=255)
                                                                                          cccGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAATGCGCTCTGCATAACGCTCCGCAGCTAGTCCTGGGTCTCGTTCGcac‑ag                                                        >  2:565527/1‑150 (MQ=255)
                                                                                          cccGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑At                                                        <  2:7817857/151‑1 (MQ=255)
                                                                                          cccGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑At                                                        <  2:6394360/151‑1 (MQ=255)
                                                                                            cGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGc                                                      <  1:1914695/151‑1 (MQ=255)
                                                                                             ggCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCCGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGcc                                                     <  1:3848957/151‑1 (MQ=255)
                                                                                                gTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCAtt                                                  <  2:11632380/151‑1 (MQ=255)
                                                                                                   tCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTccc                                               <  1:5107714/151‑1 (MQ=255)
                                                                                                   tCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCGCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTccc                                               <  2:9347199/151‑1 (MQ=255)
                                                                                                    cccgccccgcCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCGGGGTCTCGTGCGCAC‑ATGCCATTCCCg                                              >  2:8416527/1‑151 (MQ=255)
                                                                                                     ccgccccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGc                                             <  2:6973092/151‑1 (MQ=255)
                                                                                                        ccccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCAcg                                          <  2:4429511/151‑1 (MQ=255)
                                                                                                         cccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCTAAGGCTCGGCCCCTCACCTCCTGTGGTTGCTGATCGCCGATGGCGCTCTGCATTTCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑TTGCCTTTCCCGCAcgc                                         <  2:539568/151‑1 (MQ=255)
                                                                                                         cccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGTTCGCCGAAGGCGCGCTGCATATCGCTCCGCGGCGGGTCCGGGGGCTCGGGCGCAC‑AATCCATTACCGCAcgc                                         >  1:9834792/1‑151 (MQ=255)
                                                                                                         cccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTACGCTGCTCGTCCTGGGTCTCGTGCGCAC‑AAGCCATTCCCCCAcgc                                         >  2:5168454/1‑151 (MQ=255)
                                                                                                           cgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTTCAGATAGCCGAAGGCGCGCGGCATATCGCACCGCTGCGCGGCCGGGGTCTCGGGCGCAC‑AAGCCCATAccgcccgccg                                       >  1:10822381/1‑149 (MQ=255)
                                                                                                           cgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCgg                                       <  2:11144803/151‑1 (MQ=255)
                                                                                                            gccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑AAGCCCTTCCCGCAAGCGGa                                      >  2:11113713/1‑151 (MQ=255)
                                                                                                               tCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCATCAAATCGCTCCGCTGCTCGGGCAGGGTGTAGTGCGCCCAATCCCATACCC‑CACCCGGaaaa                                   >  1:4502627/1‑149 (MQ=255)
                                                                                                                cGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCGGGGTATCGTGCGCAC‑ATGCCAATACCCCACGCGGAATaa                                  >  2:2882257/1‑150 (MQ=255)
                                                                                                                 gggAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATAcc                                 <  2:4755127/151‑1 (MQ=255)
                                                                                                                  ggAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCg                                <  1:2587862/151‑1 (MQ=255)
                                                                                                                       cgcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATAtt                           <  1:2283025/151‑1 (MQ=255)
                                                                                                                       cgcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCGCTGCAAATAGCTCCGCTGCTCGTCCTGGGTGTCGGGCGCCC‑ATGCCATTCCCGCCCGCGGAATACCGATAtt                           >  1:5397549/1‑151 (MQ=255)
                                                                                                                         ccGTCGGCCGCTTTCGCGCCAGCCCTCGCGACGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGc                         <  2:2065361/151‑1 (MQ=255)
                                                                                                                         ccGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGc                         <  1:1257030/151‑1 (MQ=255)
                                                                                                                         ccGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGc                         <  2:8079748/151‑1 (MQ=255)
                                                                                                                         ccGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGc                         <  1:2426562/151‑1 (MQ=255)
                                                                                                                          cGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCg                        <  2:9627978/151‑1 (MQ=255)
                                                                                                                            tCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTa                      <  2:3195470/151‑1 (MQ=255)
                                                                                                                             cGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCAGTCCCGCACGCGGAATACCGATATTGCGTAt                     <  2:9757600/151‑1 (MQ=255)
                                                                                                                              ggCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTATg                    <  1:1552341/151‑1 (MQ=255)
                                                                                                                              ggCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCAAATAGCTCCGCTGCGCGTCCTGGGTGTCGTGCGCAC‑ATGCCATTCCCGCCCGCGGAATAACGATATTGCGTATg                    >  2:3677555/1‑151 (MQ=255)
                                                                                                                              ggCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGCCGAATGCGCGCTGCATATAGCACCGCGGCTCGTGCTGGGTCTCGGGCGCAC‑AAGCCATTACCGCACGCCGAATACCGATATTTCGTATg                    >  2:4071081/1‑151 (MQ=255)
                                                                                                                              ggCCGCGTTCGCGCCAGCCCTCGCGACGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTATg                    <  1:4375976/151‑1 (MQ=255)
                                                                                                                                ccGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCAGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTATggg                  <  2:3381189/151‑1 (MQ=255)
                                                                                                                                 cGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGc                 <  2:4349587/151‑1 (MQ=255)
                                                                                                                                  gCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGAGATAGCCGCAGGCGCGCTGCATATCGCTCCGCGGGTCGTCCTGGGTCTCGGGCGCCC‑AAGCCCATACCCCACGCGGAATACCGCTATTGGGGATGGGCg                >  1:2797316/1‑151 (MQ=255)
                                                                                                                                    tttCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTTCAGATCGCCGAATGCGCTCTGCATATCGCTCCGCTGCGCGGCCTGGGTCTCGGGGGCAC‑CTGCCATTCCCGCACGCGGAATACCCATAGTGCGTATGGGCGac              >  2:7177147/1‑150 (MQ=255)
                                                                                                                                     ttCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAg             <  2:8899802/151‑1 (MQ=255)
                                                                                                                                      tCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAgg            <  1:5593843/151‑1 (MQ=255)
                                                                                                                                         cgcCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCACATAGCCGAAGGCGCTCTGCAAATAGCTCCCCTGCGCCTCCTGGGTCTCGTGCGCAC‑AAGCCATTCCCGCACGCGGAAAAACGAGATTGCGTATGGGCGAAGGCtt         >  2:5947087/1‑151 (MQ=255)
                                                                                                                                           ccAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTc       <  2:3920697/151‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTTGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCAC‑ATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGG  >  NC_008463/966070‑966364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑