Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 2,787,895 Δ1 bp pseudogene (973/3090 nt) PA14_RS13085 → CusA/CzcA family heavy metal efflux RND transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084632,787,8930C.98.4% 1746.5 / 16.1 366pseudogene (971/3090 nt)PA14_RS13085CusA/CzcA family heavy metal efflux RND transporter
Reads supporting (aligned to +/- strand):  ref base C (1/5);  new base . (161/199);  total (162/204)
Fisher's exact test for biased strand distribution p-value = 2.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 383 total aligned reads displayed.

CTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCACGTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCAGCGCCAAC  >  NC_008463/2787745‑2788038
                                                                                                                                                      |                                                                                                                                                 
cTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAAc                                                                                                                                                   >  1:3851636/1‑150 (MQ=255)
cTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAAc                                                                                                                                                   <  1:3112646/150‑1 (MQ=255)
 tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAAcc                                                                                                                                                  >  2:7542685/1‑150 (MQ=255)
  gATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAAcct                                                                                                                                                 <  2:3854734/150‑2 (MQ=255)
    tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAAcctgg                                                                                                                                               >  1:6829690/1‑147 (MQ=255)
     cGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACCAGGCCGTGGCCACGGTGAAGAAGAAcctggt                                                                                                                                              >  1:429060/1‑146 (MQ=255)
      ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCtggtg                                                                                                                                            <  1:574940/150‑1 (MQ=255)
       gCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCtggtgg                                                                                                                                           >  2:8931593/1‑150 (MQ=255)
          agaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCNACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAg                                                                                                                                        >  1:5866174/1‑150 (MQ=255)
             aCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCCCGGTGAAGAAGAACCTGGTGGAAggcg                                                                                                                                     >  1:6663886/1‑150 (MQ=255)
               cgCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAggcgcg                                                                                                                                   <  2:10699883/149‑1 (MQ=255)
               aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAggcgcg                                                                                                                                   >  1:8379760/1‑150 (MQ=255)
                   gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAggcgcggcgc                                                                                                                               <  1:8492740/150‑1 (MQ=255)
                      aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTgg                                                                                                                            <  2:4147454/150‑1 (MQ=255)
                       aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGt                                                                                                                           >  1:5672713/1‑150 (MQ=255)
                         tGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGa                                                                                                                         <  1:9970006/150‑1 (MQ=255)
                          ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGAt                                                                                                                        >  2:7671634/1‑150 (MQ=255)
                            cccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATcg                                                                                                                      <  2:8819753/150‑1 (MQ=255)
                            cccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATcg                                                                                                                      <  2:6592557/150‑1 (MQ=255)
                            cccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATcg                                                                                                                      <  2:4462906/150‑1 (MQ=255)
                               aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg                                                                                                                   <  2:5991987/148‑1 (MQ=255)
                                   ggTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGct                                                                                                               <  1:9117881/150‑1 (MQ=255)
                                    gTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGctc                                                                                                              >  1:3238025/1‑150 (MQ=255)
                                    gTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGctc                                                                                                              >  1:7841201/1‑150 (MQ=255)
                                     tcggCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGctct                                                                                                             >  2:1539126/4‑150 (MQ=255)
                                     tcggCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGctct                                                                                                             <  1:10806287/147‑1 (MQ=255)
                                     tcggCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGctct                                                                                                             >  1:7094836/4‑150 (MQ=255)
                                      cggCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCtt                                                                                                            <  2:3777447/148‑1 (MQ=255)
                                       ggCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTc                                                                                                           <  2:7012652/149‑1 (MQ=255)
                                        gCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTcc                                                                                                          >  1:3303105/1‑150 (MQ=255)
                                         ccAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGGGGACAAGGCCGTGGCCACGGAGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCt                                                                                                         <  2:4569194/150‑1 (MQ=255)
                                           aGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt                                                                                                       <  2:577811/150‑1 (MQ=255)
                                            gcgcCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt                                                                                                      >  2:10578878/1‑150 (MQ=255)
                                              gcCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTcc                                                                                                    <  1:3458916/150‑1 (MQ=255)
                                              gcCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTcc                                                                                                    >  1:1000659/1‑150 (MQ=255)
                                               ccTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCt                                                                                                   >  2:8511476/1‑150 (MQ=255)
                                                cTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTc                                                                                                  <  2:2881723/150‑1 (MQ=255)
                                                  ggaggaGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCgg                                                                                                <  2:3328062/150‑1 (MQ=255)
                                                  ggaggaGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCgg                                                                                                <  2:3142769/150‑1 (MQ=255)
                                                      gagaTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAAc                                                                                            <  2:2331548/150‑1 (MQ=255)
                                                      gagaTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAAc                                                                                            >  1:6010635/1‑150 (MQ=255)
                                                        gaTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACAt                                                                                          >  1:1533361/1‑150 (MQ=255)
                                                         aTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc                                                                                         <  2:4989169/150‑1 (MQ=255)
                                                         aTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc                                                                                         >  2:9098502/1‑150 (MQ=255)
                                                         aTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc                                                                                         >  1:2198927/1‑150 (MQ=255)
                                                          tCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc                                                                                        >  1:1383744/1‑150 (MQ=255)
                                                            aaCCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgc                                                                                      <  1:890128/150‑1 (MQ=255)
                                                              ccGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCTCGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgc                                                                                    <  2:78157/150‑1 (MQ=255)
                                                                   cccTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGCAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGgcgc                                                                               <  1:5252367/150‑1 (MQ=255)
                                                                    ccTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCt                                                                              <  1:1879078/150‑1 (MQ=255)
                                                                       gcccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt                                                                           >  2:11187125/6‑150 (MQ=255)
                                                                         ccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCa                                                                         >  1:2805793/4‑150 (MQ=255)
                                                                          caaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAc                                                                        >  1:10003595/3‑150 (MQ=255)
                                                                           aaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAcc                                                                       >  1:8128756/2‑150 (MQ=255)
                                                                            aGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg                                                                      <  2:10994810/150‑1 (MQ=255)
                                                                            aGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg                                                                      >  2:5974140/1‑150 (MQ=255)
                                                                            aGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg                                                                      >  1:9306256/1‑150 (MQ=255)
                                                                               gggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGcca                                                                   >  2:2081572/1‑150 (MQ=255)
                                                                                ggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccac                                                                  <  1:7606806/150‑1 (MQ=255)
                                                                                   caaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcat                                                               <  2:510479/146‑1 (MQ=255)
                                                                                     aggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCGGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatca                                                             >  2:5500542/3‑150 (MQ=255)
                                                                                        cGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTGCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATcc                                                          <  2:1695050/150‑1 (MQ=255)
                                                                                         gATCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATccc                                                         >  2:10316393/1‑150 (MQ=255)
                                                                                          aTCACCGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCg                                                        <  2:623102/150‑1 (MQ=255)
                                                                                              ccGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGt                                                    <  1:9760387/150‑1 (MQ=255)
                                                                                               cGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTc                                                   <  2:1966619/150‑1 (MQ=255)
                                                                                               cGTCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGAGCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTc                                                   <  2:3695978/150‑1 (MQ=255)
                                                                                                 tCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGa                                                 >  2:7472977/1‑150 (MQ=255)
                                                                                                 tCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGa                                                 <  2:5345984/150‑1 (MQ=255)
                                                                                                 tCTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGa                                                 >  2:4397957/1‑150 (MQ=255)
                                                                                                  cTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGTAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGAt                                                <  1:7334636/150‑1 (MQ=255)
                                                                                                  cTACGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGAt                                                >  1:856400/1‑150 (MQ=255)
                                                                                                    aCGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGc                                              <  1:11176993/150‑1 (MQ=255)
                                                                                                     cGACCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCt                                             >  2:3998210/1‑150 (MQ=255)
                                                                                                       aCCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGt                                           >  1:49280/1‑150 (MQ=255)
                                                                                                       aCCGCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGt                                           <  1:5037048/150‑1 (MQ=255)
                                                                                                          gCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttca                                        <  1:6498490/150‑1 (MQ=255)
                                                                                                          gCACCACCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttca                                        >  1:7712129/1‑150 (MQ=255)
                                                                                                           caccacCCTGGTGGACAAGGCCGTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcac                                       <  1:11046133/150‑1 (MQ=255)
                                                                                                                           caaggccgTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGt                        <  1:4486457/143‑1 (MQ=255)
                                                                                                                           caaggccgTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGt                        >  1:406625/8‑150 (MQ=255)
                                                                                                                           caaggccgTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGt                        <  1:10426610/143‑1 (MQ=255)
                                                                                                                            aaggccgTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTc                       >  1:2038450/7‑150 (MQ=255)
                                                                                                                                ccgTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCa                   >  2:10258353/3‑150 (MQ=255)
                                                                                                                                ccgTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCa                   >  1:5514181/3‑150 (MQ=255)
                                                                                                                                ccgTGGCCACGGTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCa                   >  1:4772904/3‑150 (MQ=255)
                                                                                                                                     gccacggTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAgg              >  1:4411223/7‑150 (MQ=255)
                                                                                                                                        acggTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTc           >  2:8155402/4‑150 (MQ=255)
                                                                                                                                        acggTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTc           >  1:2998506/4‑150 (MQ=255)
                                                                                                                                        acggTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTc           <  1:6264731/147‑1 (MQ=255)
                                                                                                                                        acggTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTc           >  1:9627014/4‑150 (MQ=255)
                                                                                                                                        acggTGAAGAAGAACCGGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCGGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTc           >  2:9543531/4‑150 (MQ=255)
                                                                                                                                         cggTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCa          >  2:8871948/3‑150 (MQ=255)
                                                                                                                                          ggTGAAGAAGAACCTGGTGGCAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCAg         <  2:1415658/149‑1 (MQ=255)
                                                                                                                                          ggTGAAGAAGAACCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCAg         <  2:9306256/149‑1 (MQ=255)
                                                                                                                                               agaagaaCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCAGCGCCa    <  1:3538013/150‑1 (MQ=255)
                                                                                                                                               agaagaaCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCAGCGCCa    >  2:7246841/1‑150 (MQ=255)
                                                                                                                                                gaagaaCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCAGCGCCaa   >  1:2438410/1‑150 (MQ=255)
                                                                                                                                                gaagaaCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCAGCGCCaa   >  2:1266402/1‑150 (MQ=255)
                                                                                                                                                gaagaaCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCAGCGCCaa   >  2:2706731/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                 
CTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCACGTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACAGGGTCAGCGCCAAC  >  NC_008463/2787745‑2788038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: