Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 4,700,807 Δ1 bp intergenic (+165/‑150) PA14_RS21585 → / → pbpG aspartate/tyrosine/aromatic aminotransferase/D‑alanyl‑D‑alanine endopeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084634,700,8070G.99.6% 2336.4 / 0.4 476intergenic (+165/‑150)PA14_RS21585/pbpGaspartate/tyrosine/aromatic aminotransferase/D‑alanyl‑D‑alanine endopeptidase
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base . (187/287);  total (188/288)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 476 total aligned reads displayed.

GCCGGCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCGCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAGCAA  >  NC_008463/4700662‑4700951
                                                                                                                                                 |                                                                                                                                                
   ggCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGACCctc                                                                                                                                          >  2:1872003/1‑150 (MQ=255)
   ggCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACctc                                                                                                                                          >  1:4151652/1‑150 (MQ=255)
    gCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACctct                                                                                                                                         >  1:9726319/1‑150 (MQ=255)
     cTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCtctc                                                                                                                                        <  2:6351707/150‑1 (MQ=255)
      tgtgAGGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTcc                                                                                                                                       <  1:72540/150‑1 (MQ=255)
       gtgATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCg                                                                                                                                      >  1:4654883/1‑150 (MQ=255)
        tgATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGa                                                                                                                                     >  2:2599361/1‑150 (MQ=255)
          aTGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAAc                                                                                                                                   <  2:3934090/150‑1 (MQ=255)
           tGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTAGCGGTTATTCGCCCAACCGCACCACGACCTTGTGGGCGAAGGGCGAATACCGCCACAGGCGTAATCCGCCGAACCTCTCCGAAcc                                                                                                                                  >  2:6293967/1‑150 (MQ=39)
               cGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGc                                                                                                                              >  1:8915856/1‑150 (MQ=255)
                ggCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGcc                                                                                                                             <  1:8360997/150‑1 (MQ=255)
                 gCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCa                                                                                                                            <  2:3253023/150‑1 (MQ=255)
                  cTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGCTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGCGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCaa                                                                                                                           <  1:1421440/150‑1 (MQ=255)
                       tttCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCTTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATa                                                                                                                      >  2:570964/1‑150 (MQ=255)
                       tgtCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGTTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATa                                                                                                                      <  1:2863004/148‑1 (MQ=255)
                        ttCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCGCTCCGAACCGTGCCAACCAtca                                                                                                                     >  2:5351640/1‑148 (MQ=255)
                         tCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAg                                                                                                                    >  2:7406423/1‑150 (MQ=255)
                          cGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCACCCATAAga                                                                                                                   >  2:6908010/1‑149 (MQ=255)
                             cccAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAg                                                                                                                >  2:5167271/1‑150 (MQ=255)
                                aGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCAc                                                                                                             <  1:1163914/150‑1 (MQ=255)
                                  cGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACtt                                                                                                           <  1:4221940/150‑1 (MQ=255)
                                    aaTGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTc                                                                                                         >  1:9489519/1‑150 (MQ=255)
                                    aaTGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTc                                                                                                         <  2:6731897/150‑1 (MQ=255)
                                    aaTGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTc                                                                                                         <  1:2793454/150‑1 (MQ=255)
                                    aaTGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTGATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTc                                                                                                         <  2:5492580/150‑1 (MQ=255)
                                     aTGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCa                                                                                                        <  1:4526411/150‑1 (MQ=255)
                                     aTGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCa                                                                                                        >  1:2208944/1‑150 (MQ=255)
                                      tGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCaa                                                                                                       <  1:9097841/150‑1 (MQ=255)
                                      tGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCaa                                                                                                       >  1:3710601/1‑150 (MQ=255)
                                      tGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCaa                                                                                                       <  2:4213050/150‑1 (MQ=255)
                                       gCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCaaa                                                                                                      >  2:8332891/1‑150 (MQ=255)
                                           cgcACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCCGCACTTTCAAAGccc                                                                                                  >  2:7018872/1‑150 (MQ=255)
                                           cgcACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGccc                                                                                                  <  1:3198414/150‑1 (MQ=255)
                                            gcACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCt                                                                                                 <  1:3053787/150‑1 (MQ=255)
                                             cccTCCCGCCGAGGCGGCGGATACCCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCGTGTGGGCGTAGGGCGACTACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTa                                                                                                <  2:6578494/148‑1 (MQ=255)
                                             cACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTa                                                                                                <  2:8478323/150‑1 (MQ=255)
                                             cACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTa                                                                                                <  2:9297920/150‑1 (MQ=255)
                                               cTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACg                                                                                              >  1:5379364/1‑150 (MQ=255)
                                                   cgccgAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTGTCAAAGCCCTACGTGCt                                                                                          >  2:10533510/1‑150 (MQ=255)
                                                     ccgAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGTGCGTAGGGGGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCATCCATAAGTCATCACTTTCAATGCCCTACGTGCttt                                                                                        <  1:4043472/150‑1 (MQ=39)
                                                     ccgAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCttt                                                                                        <  1:6485108/150‑1 (MQ=255)
                                                         ggcggcGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCt                                                                                    >  1:10036853/1‑150 (MQ=255)
                                                         ggaggcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGAGGGCGTAGGGAGAATACCGCCACAGGCGTTATCCGCCGAAGCTCTCCGAACCGTGCCAACCATAAGTCAACCCTGTCAAAGCCCAACGTGCTTGTCCt                                                                                    >  2:2971879/4‑150 (MQ=255)
                                                            ggcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACa                                                                                 >  1:6752892/1‑150 (MQ=255)
                                                            ggcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACa                                                                                 >  2:7338499/1‑150 (MQ=255)
                                                            ggcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTGTCAAAGCCCTACGGGCTTTTCCTACa                                                                                 >  2:3702651/1‑150 (MQ=255)
                                                             gcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaa                                                                                <  1:8528964/150‑1 (MQ=255)
                                                              cggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaaa                                                                               <  1:2526433/150‑1 (MQ=255)
                                                              cggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaaa                                                                               <  2:6124750/150‑1 (MQ=255)
                                                               ggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaaaa                                                                              <  1:430171/150‑1 (MQ=255)
                                                               ggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaaaa                                                                              <  2:4651077/150‑1 (MQ=255)
                                                               ggATAACCGCGTTGCGGTACTTCGCACTACCGCACCACGACCTTGGGGGAGTAGGGCGAATACCGACACTGGCGTTATCCAGTGAACCTCTCCGAACCTTGCCAACCATAAGTCAGCACTTTCAAAGCCCTAGGGGCTTGTCGTACaaaa                                                                              >  2:9881917/1‑150 (MQ=255)
                                                                 aTAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAaga                                                                            >  2:7155513/1‑150 (MQ=255)
                                                                   aaCCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTGTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGc                                                                          >  2:10817424/1‑150 (MQ=255)
                                                                     ccGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCAt                                                                        <  2:1728676/150‑1 (MQ=255)
                                                                       gcgTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATaa                                                                      <  1:2696803/150‑1 (MQ=255)
                                                                         gTTGCGGTTATTCGCCCTTCCGCTCCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATaaaa                                                                    <  2:9063851/150‑1 (MQ=255)
                                                                         gTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATaaaa                                                                    <  1:8833271/150‑1 (MQ=255)
                                                                         gTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATaaaa                                                                    >  2:2275829/1‑150 (MQ=255)
                                                                         gTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATaaaa                                                                    <  1:164466/150‑1 (MQ=255)
                                                                             cGGTTACTCGCCCTAACGCACCACGACATTGTGGGCGTAGGGCGAAAACCGCAACAGGAGTTATCCGCCGAAACACTACGAACCGTGCCAACCATAAGTAAGCACTGTCAAAGACCAAATTGATTGTCCTACAAAAGAGCATAAAATgat                                                                >  2:5066614/1‑148 (MQ=255)
                                                                               gTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAAt                                                                   >  2:2110018/1‑145 (MQ=255)
                                                                               gTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAAt                                                                   <  1:2110018/145‑1 (MQ=255)
                                                                               gTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCa                                                              >  1:5688535/1‑150 (MQ=255)
                                                                                 tATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAAt                                                            <  2:2788887/150‑1 (MQ=255)
                                                                                   ttCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAATGAGCATAAAATGCTCAATTa                                                          >  1:11006328/1‑150 (MQ=255)
                                                                                   ttCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTa                                                          <  2:3010190/150‑1 (MQ=255)
                                                                                     cGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATg                                                        <  2:10383064/150‑1 (MQ=255)
                                                                                     cGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATg                                                        <  1:761202/150‑1 (MQ=255)
                                                                                     cGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAAACTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATg                                                        <  1:10631851/150‑1 (MQ=255)
                                                                                       cccTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATggg                                                      >  1:6990159/1‑150 (MQ=255)
                                                                                        ccTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGc                                                     <  1:8187541/150‑1 (MQ=255)
                                                                                         cTACCGCACCACGACCTTGTGGTCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCa                                                    <  2:7824484/150‑1 (MQ=255)
                                                                                         cTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCa                                                    >  2:8090785/1‑150 (MQ=255)
                                                                                         cTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCa                                                    >  2:8873476/1‑150 (MQ=255)
                                                                                         cTACCGCACCACGACCGTGTGGGCGTAGGGCGAAGACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTCCAACAGAGCATAAAATGCTCAATTATGGGCa                                                    <  2:7987139/150‑1 (MQ=255)
                                                                                          tACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCACTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCAc                                                   <  1:3353202/150‑1 (MQ=255)
                                                                                           aCCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCAcc                                                  >  1:2605294/1‑150 (MQ=255)
                                                                                             cGCACCACGACCTTGTGGGCGTAGGGCGACTACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTCCACAAGAGCATAAAATGCTCAATTATGGGCACCAg                                                <  2:10170004/150‑1 (MQ=255)
                                                                                              gCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGt                                               >  1:1897194/1‑150 (MQ=255)
                                                                                                 ccacGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTca                                            <  1:3895963/150‑1 (MQ=255)
                                                                                                     gACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACt                                        >  1:10852600/1‑150 (MQ=255)
                                                                                                     gACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACt                                        <  2:3565482/150‑1 (MQ=255)
                                                                                                      aCCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTg                                       <  2:1127810/150‑1 (MQ=255)
                                                                                                      aCCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTg                                       <  2:9644965/150‑1 (MQ=255)
                                                                                                           gtgGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGccc                                  <  1:6652211/150‑1 (MQ=255)
                                                                                                           gtgGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGccc                                  <  2:4484811/150‑1 (MQ=255)
                                                                                                                    gggCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGcccc                         >  1:6121049/1‑150 (MQ=255)
                                                                                                                    gggCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGcccc                         >  1:6322529/1‑150 (MQ=255)
                                                                                                                           tACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTtc                  <  1:4390927/150‑1 (MQ=255)
                                                                                                                           tACCGCCACAGGCGTTATCCGCCGAACCACTCCGAACCGTGCCAACCAAAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTtc                  <  1:7983248/150‑1 (MQ=255)
                                                                                                                               gCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGt              >  2:5235332/1‑150 (MQ=255)
                                                                                                                               gCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGt              >  2:1474417/1‑150 (MQ=255)
                                                                                                                                ccACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTc             >  2:4759183/1‑150 (MQ=255)
                                                                                                                                ccACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTc             >  2:3358082/1‑150 (MQ=255)
                                                                                                                                    aGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAg         <  1:4818461/150‑1 (MQ=255)
                                                                                                                                       cGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGa      >  2:1367089/1‑150 (MQ=255)
                                                                                                                                        gTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAg     <  2:6715803/150‑1 (MQ=255)
                                                                                                                                          tATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAGCa   <  1:5101633/150‑1 (MQ=255)
                                                                                                                                           aTCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAGCaa  >  1:3581783/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
GCCGGCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCGCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAGCAA  >  NC_008463/4700662‑4700951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: