Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 5,395,470 Δ1 bp intergenic (‑103/+50) PA14_RS24730 ← / ← PA14_RS24735 hypothetical protein/ATP‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084635,395,4670G.95.3% 1543.2 / 88.5 380intergenic (‑100/+53)PA14_RS24730/PA14_RS24735hypothetical protein/ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base G (0/9);  major base . (206/138);  minor base T (1/16);  total (207/173)
Fisher's exact test for biased strand distribution p-value = 7.97e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 394 total aligned reads displayed.

CGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAG  >  NC_008463/5395318‑5395612
                                                                                                                                                     |                                                                                                                                                 
cgcgTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAg                                                                                                                                                   <  2:6503524/150‑1 (MQ=255)
   gTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggc                                                                                                                                                >  1:7486033/1‑149 (MQ=255)
    tGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcg                                                                                                                                               >  2:2737509/1‑148 (MQ=255)
           ccccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCggggcttt                                                                                                                                       <  1:8673487/150‑5 (MQ=255)
            cccAGACAAGGGCGGATGAGGCAGATGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCAACAGGGCTGAAACGCACGAGGGCGGGGCTTTc                                                                                                                                     <  2:812845/150‑1 (MQ=255)
             ccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTcc                                                                                                                                    <  2:5977454/150‑1 (MQ=255)
               aGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAg                                                                                                                                  <  2:3329883/150‑1 (MQ=255)
               aGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAg                                                                                                                                  >  1:1992516/1‑150 (MQ=255)
                gACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCTGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGc                                                                                                                                 >  1:6627101/1‑150 (MQ=255)
                gACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGc                                                                                                                                 >  2:3235881/1‑150 (MQ=255)
                  cAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGccc                                                                                                                               >  1:3031986/1‑150 (MQ=255)
                  cAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGccc                                                                                                                               <  2:4937025/150‑1 (MQ=255)
                    aGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCg                                                                                                                             >  2:5687255/1‑150 (MQ=255)
                    aGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCg                                                                                                                             >  2:6631666/1‑150 (MQ=255)
                       gCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGccc                                                                                                                          >  1:10403941/1‑150 (MQ=255)
                         ggATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTc                                                                                                                        <  1:6783960/150‑1 (MQ=255)
                         ggATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTc                                                                                                                        >  2:4180143/1‑150 (MQ=255)
                          gATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCg                                                                                                                       <  2:8946987/150‑1 (MQ=255)
                           aTGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCgg                                                                                                                      <  2:1773623/150‑1 (MQ=255)
                            tGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGc                                                                                                                     >  1:9142711/1‑150 (MQ=255)
                               ggCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAgg                                                                                                                  >  2:9237197/1‑150 (MQ=255)
                                  agagGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTc                                                                                                               >  1:7275139/1‑150 (MQ=255)
                                  agagGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGGCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTc                                                                                                               <  2:5493411/150‑1 (MQ=255)
                                   gagGTTTCGCGGCATGGCGGCATCCTCACGGGTGTTCCCAGTTTTGCGCCTACACAGGCCGCCAGGGTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTcc                                                                                                              <  2:8228818/150‑1 (MQ=255)
                                   gagGTTACGCGGCATGGCGGCACCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTcc                                                                                                              <  1:7300881/150‑1 (MQ=255)
                                    agGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGACCTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCg                                                                                                             >  2:4754171/1‑150 (MQ=255)
                                         aCGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAAc                                                                                                        >  1:10174073/1‑150 (MQ=255)
                                            cgGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAAcgcg                                                                                                     >  2:359189/1‑150 (MQ=255)
                                              gCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGcc                                                                                                   >  1:119440/1‑150 (MQ=255)
                                               cATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCg                                                                                                  >  1:127870/1‑150 (MQ=255)
                                                aTGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACCCCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCgg                                                                                                 <  2:6088515/150‑1 (MQ=255)
                                                aTGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCgg                                                                                                 >  2:1480140/1‑150 (MQ=255)
                                                aTGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCgg                                                                                                 >  1:5546748/1‑150 (MQ=255)
                                                aTGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCgg                                                                                                 >  2:9334432/1‑150 (MQ=255)
                                                        aTCCTCCCGGGGTTACCCATTTTTGCCCCTCCCCCTGCCGCCCGTTTCCGCATCGCGCCGGCGGTAACTTGTCCACAGGGCTGAACCGCACGTGGG‑‑GGGGGCTTCCCACCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTc                                                                                         <  1:4829844/150‑1 (MQ=255)
                                                         tCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTcc                                                                                        >  2:3774244/1‑150 (MQ=255)
                                                           cTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCctt                                                                                      >  2:10484718/1‑150 (MQ=255)
                                                            tCACGGGGGTTCCCTGTTTTGAGCCTACACCGGCCGCCAGGTTCCGCATAGCGCGGGCGGGAACTTGGCCACCGGGCTGAAACGCACGTGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttc                                                                                     <  2:1864052/150‑1 (MQ=255)
                                                            tCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttc                                                                                     >  1:8438756/1‑150 (MQ=255)
                                                             cACGGGGGTCCCCAGTTTGGAGCCTACACCCGCCGCCCGGTTCCGCACAGCGCCGGCGGGCACTGGTCCCCTGGGCGGAACCGCCCGTGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttct                                                                                    <  2:1137651/150‑1 (MQ=255)
                                                              ccGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt                                                                                   <  2:6685500/149‑1 (MQ=255)
                                                               cGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCTGGTTCCGCATACCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGCGGGCGGGGCTTTCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCttcttc                                                                                  <  1:5355461/150‑1 (MQ=255)
                                                                 ggggTTCCCAGTTTTGAGCCTACACCCGCCGCCAGGTTCCGCAGCGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGCGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgc                                                                                <  2:3704263/150‑1 (MQ=255)
                                                                   ggTTCCCAGTTTTGCGCCTACACCTGCCGCCAGGTTCCGCATCGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgccg                                                                              <  2:5780139/150‑1 (MQ=255)
                                                                   ggTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgccg                                                                              >  1:7832298/1‑150 (MQ=255)
                                                                    gTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgccgc                                                                             >  1:2164513/1‑150 (MQ=255)
                                                                    gTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgccgc                                                                             >  1:6932951/1‑150 (MQ=255)
                                                                      tCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCgg                                                                           <  1:8664051/150‑1 (MQ=255)
                                                                        ccAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGcc                                                                         >  2:6311638/1‑150 (MQ=255)
                                                                          aGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCtt                                                                       <  2:2485490/150‑1 (MQ=255)
                                                                             tttGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTc                                                                    >  2:4327609/1‑150 (MQ=255)
                                                                               tGAGCCTACCCCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCCCTGGGCTGAAACGCACGAGGGCGGGGCTTGCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCt                                                                  <  2:3489439/150‑1 (MQ=255)
                                                                               tGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCt                                                                  <  2:4071310/150‑1 (MQ=255)
                                                                               tGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCt                                                                  >  2:7645254/1‑150 (MQ=255)
                                                                                 aGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTc                                                                >  2:7065627/1‑150 (MQ=255)
                                                                                 aGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTc                                                                >  1:10025317/1‑150 (MQ=255)
                                                                                   ccTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgc                                                              <  1:10895739/150‑1 (MQ=255)
                                                                                    cTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgcc                                                             >  1:8135310/1‑150 (MQ=255)
                                                                                      acacCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgccgc                                                           >  2:5074675/1‑150 (MQ=255)
                                                                                       cacCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACCGGGCTGAAACGCACGCGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCcgcg                                                          <  1:11115228/150‑1 (MQ=255)
                                                                                       cacCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCcgcg                                                          >  1:1100709/1‑150 (MQ=255)
                                                                                       cacCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCcgcg                                                          >  1:10724910/1‑150 (MQ=255)
                                                                                        acCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGa                                                         <  2:5204106/150‑1 (MQ=255)
                                                                                         ccTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGAc                                                        >  2:2223184/1‑150 (MQ=255)
                                                                                           tGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTGCTTCGCCGCGGCCTTGTCCTTCGCCGCGACgg                                                      >  2:8865178/1‑150 (MQ=255)
                                                                                             ccgccAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGGTCCGGCAACGCGCCGGACTCAGTCCTTCGTCGCCGCGGCCTTGTCCTTCGCCGCGACGGtc                                                    >  2:3010416/1‑150 (MQ=255)
                                                                                              cgccAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGtct                                                   >  1:3707172/1‑150 (MQ=255)
                                                                                                 cAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCtt                                                <  1:2665131/150‑1 (MQ=255)
                                                                                                  aGGGTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCttt                                               <  1:1544753/150‑1 (MQ=255)
                                                                                                   ggTTCCGCATAGCGCCGGCGGGAACTGGTCCACAGGGCTGAAACGCACGCGGGCGGGGCTTTCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtc                                              <  1:9339534/150‑1 (MQ=255)
                                                                                                    gTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtct                                             >  2:8003530/1‑150 (MQ=255)
                                                                                                      tCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAACCGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTcc                                           <  2:9556514/150‑1 (MQ=255)
                                                                                                            tAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGc                                     <  2:10665162/150‑1 (MQ=255)
                                                                                                              gcgcCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCtt                                   <  2:7359283/150‑1 (MQ=255)
                                                                                                               cgcCGGCGGGAACTGGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTg                                  <  1:9283317/150‑1 (MQ=255)
                                                                                                                gcCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGt                                 <  2:7831814/150‑1 (MQ=255)
                                                                                                                   ggcggGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCt                              >  2:1375703/1‑150 (MQ=255)
                                                                                                                   ggcggGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCt                              >  1:9525062/1‑150 (MQ=255)
                                                                                                                      gggAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCtttt                           >  2:852389/1‑150 (MQ=255)
                                                                                                                      gggAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCtttt                           <  2:6851753/150‑1 (MQ=255)
                                                                                                                       ggAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTc                          <  1:6325134/150‑1 (MQ=255)
                                                                                                                         aaCTTGTCCACAGGGCTGAACCGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCt                        <  1:2361174/150‑1 (MQ=255)
                                                                                                                          aCTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCtt                       >  1:504096/1‑150 (MQ=255)
                                                                                                                            ttGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgt                     <  1:5472769/150‑1 (MQ=255)
                                                                                                                             tGTCCACAGGGCTGAACCGCACGCGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtc                    <  2:4498473/150‑1 (MQ=255)
                                                                                                                              gTCCACAGGGCTGAAACGCCCGAGGGCGGGGCTTTCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcg                   <  1:3483744/150‑1 (MQ=255)
                                                                                                                              gTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcg                   >  2:1293228/1‑150 (MQ=255)
                                                                                                                              gTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCGTgtcg                   >  1:2806842/1‑150 (MQ=255)
                                                                                                                               tCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcgt                  >  2:10166116/1‑150 (MQ=255)
                                                                                                                                ccACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcgtc                 >  1:5193556/1‑150 (MQ=255)
                                                                                                                                 cacaGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTcc                >  1:8357321/1‑150 (MQ=255)
                                                                                                                                 cacaGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTcc                <  1:9755979/150‑1 (MQ=255)
                                                                                                                                    aGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCctct             >  2:2627856/1‑150 (MQ=255)
                                                                                                                                    aGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCctct             <  1:4466543/150‑1 (MQ=255)
                                                                                                                                     gggCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCtt            <  1:4065987/150‑1 (MQ=255)
                                                                                                                                      ggCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGGTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTc           <  2:10820345/150‑1 (MQ=255)
                                                                                                                                         tGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCAt        >  1:592539/1‑150 (MQ=255)
                                                                                                                                         tGAAACGCACGCGGGCGGGGCTTGCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCAt        <  1:10458591/150‑1 (MQ=255)
                                                                                                                                             aCGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCg    >  2:9031246/1‑150 (MQ=255)
                                                                                                                                               gCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAg  >  1:4546245/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
CGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAG  >  NC_008463/5395318‑5395612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: