| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 945,897 | (C)5→4 | intergenic (‑264/‑57) | PA14_RS04400 ← / → PA14_RS04405 | 2,4'‑dihydroxyacetophenone dioxygenase family protein/helix‑turn‑helix domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 945,893 | 0 | C | . | 99.3% | 2060.0 / 6.5 | 422 | intergenic (‑260/‑61) | PA14_RS04400/PA14_RS04405 | 2,4'‑dihydroxyacetophenone dioxygenase family protein/helix‑turn‑helix domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (178/241); minor base G (0/3); total (178/244) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 450 total aligned reads displayed.
GACCCGCGACGCGCCGCCAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCCGGGCGCCTGGCCCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTGGGAGGACT > NC_008463/945743‑946038 | aCCCGCGACGCGCCGCCAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGGcc > 1:6808170/1‑150 (MQ=255) aCCCGCGACGCGCCGCCAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGGcc > 1:3545106/1‑150 (MQ=255) cccGCGACGCGCCGCCAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGGccc > 1:1653780/1‑150 (MQ=255) cccGCGACGCGCCGCCAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGGccc > 1:3383262/1‑150 (MQ=255) gcgACGCGCCGCCAAGCTGGCCTGCCCAGCGTCGGAGCCGGCGGGAGGGCGATTGACGGAGGAATGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGTCCGACCGCGACAGGTCGGCGGTGCGGCGC‑GGCGCCTGGccccgg > 1:6289619/1‑148 (MQ=255) gcgcCGCCAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGcc < 2:5332932/150‑1 (MQ=255) cgccgcCAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCt < 2:8561046/150‑1 (MQ=255) ccgccAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTg > 2:5574558/1‑150 (MQ=255) gccAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGcc > 1:7962125/1‑150 (MQ=255) gccAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGcc < 2:5966815/150‑1 (MQ=255) ccAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCt < 2:4806722/150‑1 (MQ=255) aaGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGa < 2:8093689/150‑1 (MQ=255) aGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAg < 2:10302916/150‑1 (MQ=255) gCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCg < 2:7783796/150‑1 (MQ=255) gCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCg < 2:1939194/150‑1 (MQ=255) ccTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCgg > 1:1773460/1‑150 (MQ=255) tGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGa > 2:3790059/1‑150 (MQ=255) gCCCAGCGTCGGCGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAg > 2:4099577/1‑150 (MQ=255) gCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCa < 2:6533762/150‑1 (MQ=255) gCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCa < 1:2127450/150‑1 (MQ=255) cGTCGGAGCCGGCGGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCAc > 2:7228129/1‑150 (MQ=255) ggAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAg < 2:7083191/150‑1 (MQ=255) gCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGt < 2:10841671/150‑1 (MQ=255) ccGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGtt < 1:2602393/150‑1 (MQ=255) ccGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGtt < 1:5237651/150‑1 (MQ=255) ccGGCTGGAGGGCGATTGACGGAGGAAAGGAGTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGtt < 1:2885930/150‑1 (MQ=255) cGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTc > 2:4626239/1‑150 (MQ=255) ggCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcg > 1:7168685/1‑150 (MQ=255) gCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcga < 1:10923204/150‑1 (MQ=255) gCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcga < 2:161068/150‑1 (MQ=255) cTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcgac < 1:10053509/150‑1 (MQ=255) cTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcgac < 1:8399893/150‑1 (MQ=255) tGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcgacg < 2:8711524/150‑1 (MQ=255) tGGAGGGAGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcgacg < 1:1248742/150‑1 (MQ=255) ggAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcgacga < 1:10786824/150‑1 (MQ=255) ggAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcgacga < 2:8912229/150‑1 (MQ=255) ggAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTcgacga > 1:10182953/1‑150 (MQ=255) gAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACgag > 2:4233772/1‑150 (MQ=255) gAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACgag < 2:11122505/150‑1 (MQ=255) gggCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGagaa > 2:9134104/1‑150 (MQ=255) ggCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGagaag > 1:2455101/1‑150 (MQ=255) gCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGagaaga < 1:8125105/150‑1 (MQ=255) gATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAAt < 2:971563/150‑1 (MQ=255) aTTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATa > 2:4547232/1‑150 (MQ=255) ttGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGACGAATaa > 2:10127617/1‑150 (MQ=255) aCGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATaaaaa > 2:4976257/1‑150 (MQ=255) cGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAAt > 2:2069075/1‑150 (MQ=255) ggaggaAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATg > 2:6840706/1‑150 (MQ=255) aggaAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGcc < 1:6593026/150‑1 (MQ=255) ggaAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGccc < 1:3804433/150‑1 (MQ=255) aGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGcac > 1:4469893/1‑150 (MQ=255) gATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACAt < 2:3952073/150‑1 (MQ=255) aTTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATg < 1:423881/150‑1 (MQ=255) aTTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATg < 2:1815022/150‑1 (MQ=255) aTTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATg < 2:10725193/150‑1 (MQ=255) aTTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATg > 1:8796975/1‑150 (MQ=255) ttCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGATCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCTGCGTTCGTCGAGAAGAATAAATATGCCCGCACATGc < 2:8267412/150‑1 (MQ=255) cAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCt < 1:9894247/150‑1 (MQ=255) cAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCt < 2:957048/150‑1 (MQ=255) aGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCtt < 2:2368735/150‑1 (MQ=255) tGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCt < 1:6049403/150‑1 (MQ=255) ttAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCg > 2:1307993/1‑150 (MQ=255) tAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGa < 1:4804873/150‑1 (MQ=255) aaaTGACGGGGAGCCAGGCGCCTCGCCGACCGACCGCGACAGGACGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGACCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGa > 2:5912566/2‑150 (MQ=255) aaTGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGaa < 2:6212450/150‑1 (MQ=255) gACGGGGTGCCAGGCGCCTCGCCGACCGCCCGCGACAGGGCGGCGGAGCGGCCC‑GGCGCC‑GGGCCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATCAAAATGCCCGCACATGCCTTGCTCGAAATc < 2:8394749/150‑1 (MQ=255) aCGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATcc > 1:7904783/1‑150 (MQ=255) aCGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATcc > 1:1857803/1‑150 (MQ=255) cGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCcg > 1:3921167/1‑150 (MQ=255) cGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCcg < 2:5239393/150‑1 (MQ=255) ggggTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGACTAAAAATGCCCGCACATGGCTTGCTCGAAATCcgg > 2:5630061/1‑150 (MQ=255) ggTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCcggcg < 1:4976257/150‑1 (MQ=255) ccAGGCGCCTCGCCGACCGTCCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCGGGAGGCGTTGCGTGAGGGCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATACGGCGGGcc < 2:7446513/150‑1 (MQ=255) ccAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGcc > 2:3310208/1‑150 (MQ=255) ccAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGcc < 2:3230579/150‑1 (MQ=255) gcgcCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCa > 2:3057307/1‑150 (MQ=255) gcCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCAcc > 1:7075291/1‑150 (MQ=255) gCCGACCGACCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGa > 2:2738851/1‑150 (MQ=255) ccgaccgaCCGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGAc > 1:10368539/1‑150 (MQ=255) gaccgaccGCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACAt > 2:6350023/1‑150 (MQ=255) accgaccgCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCa < 2:362334/143‑1 (MQ=255) accgCGACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTcccc < 1:9254361/150‑1 (MQ=255) cgcgACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTg < 2:260177/150‑1 (MQ=255) gACAGGTCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGag < 1:10507145/150‑1 (MQ=255) tCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCgg > 1:2749816/1‑150 (MQ=255) tCGGCGGAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCgg > 1:8674157/1‑150 (MQ=255) cggcggAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGc > 1:9019001/1‑150 (MQ=255) ggcggAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCt < 2:2195850/150‑1 (MQ=255) cggAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTgg < 2:9396369/150‑1 (MQ=255) gAGCGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCg > 2:2496161/1‑150 (MQ=255) cGGCCC‑GGCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTc < 1:4672192/150‑1 (MQ=255) ccggCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTggg < 2:9322644/148‑1 (MQ=255) ccggCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTggg < 1:2981798/148‑1 (MQ=255) ccggCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTggg > 2:1024939/3‑150 (MQ=255) cggCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTGgga > 1:5906758/2‑150 (MQ=255) ggCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGACGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGGTCTGggag > 2:7030528/1‑150 (MQ=255) ggCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTGggag > 2:1709161/1‑150 (MQ=255) ggCGCCTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTGggag < 1:5336073/150‑1 (MQ=255) ccTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTGGGAGGACt < 1:7481752/150‑1 (MQ=255) ccTGG‑CCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTGGGAGGACt > 1:4279376/1‑150 (MQ=255) | GACCCGCGACGCGCCGCCAAGCTGGCCTGCCCAGCGTCGGAGCCGGCTGGAGGGCGATTGACGGAGGAAAGGATTCAGATGTTAATGACGGGGTGCCAGGCGCCTCGCCGACCGACCGCGACAGGTCGGCGGAGCGGCCCGGGCGCCTGGCCCCCGGAGGCCTTGCCTGAGGTCCGGGAGGTCCACGCAGCGTTCGACGAGAAGAATAAAAATGCCCGCACATGCCTTGCTCGAAATCCGGCGGGCCAGCACCCAGGACATTCCCCTGGAGCAGCGGCTGGCGTTCTGGGAGGACT > NC_008463/945743‑946038 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |