| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,341,704 | Δ1 bp | pseudogene (664/957 nt) | PA14_RS10890 → | DUF58 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,341,702 | 0 | C | . | 99.0% | 2500.4 / 13.0 | 514 | pseudogene (662/957 nt) | PA14_RS10890 | DUF58 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (4/1); new base . (238/271); total (242/272) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 536 total aligned reads displayed.
GCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTG > NC_008463/2341552‑2341847 | gCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAcc > 2:8227302/1‑150 (MQ=255) cTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAcca < 2:5926066/150‑2 (MQ=255) tGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccag < 2:2307749/150‑3 (MQ=255) ggTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccagcc > 2:7180520/1‑146 (MQ=255) gTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCg < 1:10274885/150‑1 (MQ=255) cGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑GCGTTCCTCGCGCCGGGCGCGGAGGAGGCCGAGGACCTGGGGCGCGCGCTGGCGCGCGCGGGCGTCGAGGACTACCAGGGCCGGCGCGCCTA‑GCAGCCggg > 1:8679890/1‑150 (MQ=255) gACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGc > 1:9410372/1‑150 (MQ=255) cTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGAc > 2:7615614/1‑150 (MQ=255) cTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGAc > 2:8569572/1‑150 (MQ=255) tgcgccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACt < 2:10929545/146‑1 (MQ=255) cgccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTcg > 1:6732585/3‑150 (MQ=255) cagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcgg > 2:3362329/1‑150 (MQ=255) cagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcgg < 2:3881406/150‑1 (MQ=255) agGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCC‑GCCGGGCGACTCgcggcggc > 2:1038272/1‑150 (MQ=255) ggCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcggcg > 1:7841575/1‑150 (MQ=255) gcTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCt < 2:2849748/150‑1 (MQ=255) gcTGGTCTACCCTCGGCCGCGGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACGACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCt < 2:7967470/150‑1 (MQ=255) cgggccaCCCTCGGCCGCTGGCCGCCGAGCCCG‑ACCACGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACACGCGGCGGCGCCTGc < 2:1843328/144‑1 (MQ=255) tCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATTCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACt > 1:2239321/1‑150 (MQ=255) tACCCTCGGGCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTgg > 1:5439939/1‑150 (MQ=255) aCCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGa > 2:5309874/1‑150 (MQ=255) aCCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGa > 2:4395249/1‑150 (MQ=255) aCCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGa < 1:6225919/150‑1 (MQ=255) cccTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGaa > 2:2985899/1‑150 (MQ=255) cccTCGGCCGCGGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGaa < 1:8320184/150‑1 (MQ=255) tCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTTCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGc < 1:3737579/150‑1 (MQ=255) cGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCg > 1:7532027/1‑150 (MQ=255) ggCCGCGGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGt < 2:6420108/150‑1 (MQ=255) gCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtt > 2:3482996/1‑150 (MQ=255) gCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtt > 1:2845312/1‑150 (MQ=255) ggCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCg > 1:9089050/1‑150 (MQ=255) gCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGcc > 1:5175874/1‑150 (MQ=255) gagccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTTGCGAGAACGGGCGTCGAAGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAg > 1:1427691/4‑150 (MQ=255) gagccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAg < 2:6184031/147‑1 (MQ=255) gagccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAg < 1:1747517/147‑1 (MQ=255) agccGTTCCTCGCGCCGGGTGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAgg > 2:1342040/3‑150 (MQ=255) gTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGgct < 2:4741365/150‑1 (MQ=255) gtCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGgctg < 2:7057743/149‑1 (MQ=255) gtCCTCGCGCCGGGCGCGGAGGATGCCGACGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGgctg < 1:5682485/149‑1 (MQ=255) cTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGctgctg > 2:6977253/1‑150 (MQ=255) tCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTgg < 1:2729743/150‑1 (MQ=255) cgcCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGa < 1:8030985/150‑1 (MQ=255) gcgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTc < 2:2172991/150‑1 (MQ=255) ggaggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgc > 1:7455242/1‑150 (MQ=255) gaggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgcc > 1:1322433/1‑150 (MQ=255) aggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgccg < 2:7330012/150‑1 (MQ=255) aggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgccg < 2:7816764/150‑1 (MQ=255) ggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgccgc > 2:1988619/1‑150 (MQ=255) ggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgccgc > 2:3114450/1‑150 (MQ=255) aTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCgcgc > 1:8512036/1‑150 (MQ=255) ccGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcg < 2:3223943/150‑1 (MQ=255) cGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcgg > 1:9788101/1‑150 (MQ=255) gAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcggc < 1:11041821/150‑1 (MQ=255) gACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCggg < 1:3296307/150‑1 (MQ=255) aCCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCgggg > 2:9657981/1‑150 (MQ=255) ccAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGa > 1:10019010/1‑150 (MQ=255) ggggCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGACGa > 2:7371243/1‑150 (MQ=255) ggggCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGa < 1:5820022/150‑1 (MQ=255) gggCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGAc > 2:6313753/1‑150 (MQ=255) cgcgcgcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCtg < 1:2507635/150‑1 (MQ=255) gcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCt < 2:10718248/150‑1 (MQ=255) gcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCt < 1:4319044/150‑1 (MQ=255) tGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTgg < 1:3606342/150‑1 (MQ=255) ggCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGa > 2:11084275/1‑150 (MQ=255) ggCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGa < 2:5388674/150‑1 (MQ=255) gCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGaa > 2:2474213/1‑150 (MQ=255) gCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGaa < 2:4942770/150‑1 (MQ=255) cGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAAt < 2:8401634/150‑1 (MQ=255) cGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAAt < 1:3909370/150‑1 (MQ=255) cGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAAt < 1:4826767/150‑1 (MQ=255) gAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAAtt < 2:1545393/150‑1 (MQ=255) aGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTc > 1:7261515/1‑150 (MQ=255) gCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCg > 2:6825532/1‑150 (MQ=255) cACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGa > 2:10615127/1‑150 (MQ=255) aCGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAg < 2:750965/150‑1 (MQ=255) cGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAgc < 2:4288653/150‑1 (MQ=255) ggCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAgcgc > 2:9412736/1‑150 (MQ=255) gCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGcc < 1:4976849/150‑1 (MQ=255) gTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTc < 1:10516945/150‑1 (MQ=255) gTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTc > 2:8482748/1‑150 (MQ=255) gacgacTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTcggc < 1:6002616/150‑1 (MQ=255) acgacTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGACTTCGAGCGCCTcggcg > 2:6702182/1‑150 (MQ=255) acgacTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCCGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTcggcg > 1:4685860/1‑150 (MQ=255) gacTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCggg < 2:5491654/150‑1 (MQ=255) gacTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCggg < 1:4547656/150‑1 (MQ=255) acTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCgggg > 2:10261903/1‑150 (MQ=255) cTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGa < 2:8798096/150‑1 (MQ=255) tACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAt < 1:6905340/150‑1 (MQ=255) aCCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcg > 1:1236425/1‑96 (MQ=255) aCCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAtc < 1:2087456/150‑1 (MQ=255) ccAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAtct < 1:6400557/150‑1 (MQ=255) cAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAtctc > 1:280550/1‑150 (MQ=255) cAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAtctc > 1:4143901/1‑150 (MQ=255) aCTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAg < 1:557012/150‑1 (MQ=255) gcgcgcCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCg < 2:4528232/150‑1 (MQ=255) cgcgcCTT‑CCAGCCGGTCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGTCCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGc < 2:9240764/150‑1 (MQ=255) gcgcCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGcc < 1:2057102/150‑1 (MQ=255) gcgcCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGcc < 1:10883241/150‑1 (MQ=255) gcgcCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGcc < 1:9998148/150‑1 (MQ=255) cgcCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCt < 2:5218217/150‑1 (MQ=255) | GCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTG > NC_008463/2341552‑2341847 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |