| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 559,051 | +T | intergenic (+619/+70) | PA14_RS02545 → / ← rarD | glycine cleavage system protein R/EamA family transporter RarD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 559,050 | 1 | . | T | 98.8% | 1439.3 / ‑0.9 | 348 | intergenic (+618/+71) | PA14_RS02545/rarD | glycine cleavage system protein R/EamA family transporter RarD |
| Reads supporting (aligned to +/- strand): ref base . (3/1); major base T (192/148); minor base G (4/0); total (199/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 365 total aligned reads displayed.
AGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTA‑T‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGATGA > NC_008463/558902‑559194 | gtgtGCTCAAAGACTGCTCTGGCGCTTTGCAGGGCTTCTTCCGACGAGGTATCCACGCGCCTGCGGGGCGGAGAAGGCAGGTCTATGCACACAGTCCGTGCATGATCCTGTGGTAAAGCCTGGGGTGGAGCGCTGAGGGTCAGTA‑ttggc > 2:7816099/1‑146 (MQ=255) gCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCgggg > 2:427916/1‑150 (MQ=255) aaaGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATa > 1:10691126/1‑150 (MQ=255) cTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATaggaag > 1:2632861/1‑150 (MQ=255) cTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATaggaag < 1:1755516/150‑1 (MQ=255) tGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGGATT‑GGCGGGGGATaggaagg > 1:10240265/1‑150 (MQ=255) tCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGt < 2:9210031/150‑1 (MQ=255) tCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGt > 1:2559999/1‑150 (MQ=255) aGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGc > 2:903095/1‑150 (MQ=255) ggCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCg < 1:2791801/150‑1 (MQ=255) gcgcTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGCTCGCTGAGCGTCAGTA‑TGGGCGGGGGATAGGAAGGAGTGCgt > 2:1347480/1‑150 (MQ=255) gcgcTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCgt < 1:9230184/150‑1 (MQ=255) gcgcTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCgt > 2:2959825/1‑150 (MQ=255) gcgcTTTGCAGGGCTTCTTCAGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGACTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCgt < 2:7077150/150‑1 (MQ=255) gcTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCgtgt > 1:3098649/1‑150 (MQ=255) cTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGtt < 1:8147379/150‑1 (MQ=255) tttGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGttt < 2:10419147/150‑1 (MQ=255) tttGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGttt < 2:6393637/150‑1 (MQ=255) gCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGtttttt < 1:2129604/150‑1 (MQ=255) gCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCa < 2:2452947/150‑1 (MQ=255) tcttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGc < 2:9587361/150‑1 (MQ=255) tcttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGc < 2:820599/150‑1 (MQ=255) tcttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGc < 1:3710492/150‑1 (MQ=255) tcttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGc < 2:10596043/150‑1 (MQ=255) tcttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGc < 1:6247726/150‑1 (MQ=255) ttcCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCtt > 2:14406/1‑150 (MQ=255) ccGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGc < 2:312496/150‑1 (MQ=255) ccGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGc > 1:5109058/1‑150 (MQ=255) ccGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGc > 1:8286835/1‑150 (MQ=255) cgacgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCg > 2:9973523/1‑150 (MQ=255) cgacgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCg < 2:4589437/150‑1 (MQ=255) acgaGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGa < 2:8059275/150‑1 (MQ=255) gTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTc < 2:4054504/150‑1 (MQ=255) gTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTc > 2:5528071/1‑150 (MQ=255) gTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTc > 1:114380/1‑150 (MQ=255) gTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTc > 2:36146/1‑150 (MQ=255) ttATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTcc > 1:6874369/1‑150 (MQ=255) tATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCg > 1:950947/1‑150 (MQ=255) cgcCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTg > 1:7819088/1‑150 (MQ=255) gcCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCT‑GGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTggg < 2:6807922/150‑1 (MQ=255) tGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGa > 1:9387297/1‑150 (MQ=255) tGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGa < 2:10164293/150‑1 (MQ=255) ggggAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATaa < 1:541715/150‑1 (MQ=255) gggAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAAc > 2:2737727/1‑150 (MQ=255) gggAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAAc < 1:8444132/150‑1 (MQ=255) aggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTc < 1:10489168/150‑1 (MQ=255) aggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCGGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGCGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTc > 2:2045509/1‑150 (MQ=255) ggagAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCa > 2:4904863/1‑150 (MQ=255) agaAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGc > 2:9891625/1‑150 (MQ=255) gCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGc > 1:5825330/1‑150 (MQ=255) aGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTg < 2:183839/150‑1 (MQ=255) cTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGa > 2:4299882/1‑150 (MQ=255) cTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGa < 1:8092665/150‑1 (MQ=255) aTGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAg > 1:5385312/1‑150 (MQ=255) aTGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAg < 1:7916271/150‑1 (MQ=255) cacaAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAggcg < 1:9981956/150‑1 (MQ=255) aaaGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGgcggcg > 1:11102790/1‑150 (MQ=255) aaaGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGgcggcg < 1:10037781/150‑1 (MQ=255) aaGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGgcgc > 1:3966440/1‑150 (MQ=255) aCGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGc > 1:418797/1‑150 (MQ=255) aCGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGc < 2:2869617/150‑1 (MQ=255) aTGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGcc < 1:3847416/150‑1 (MQ=255) aTGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGcc > 1:148953/1‑150 (MQ=255) tGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCa < 1:107591/150‑1 (MQ=255) aaCCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAgg > 1:5512528/1‑150 (MQ=255) aaCCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAgg > 1:7220391/1‑150 (MQ=255) aaCCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAgg < 1:3521239/150‑1 (MQ=255) cTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGt > 1:189746/1‑150 (MQ=255) tgtgGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTc < 2:7456166/150‑1 (MQ=255) gtgGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCg > 1:9273508/1‑150 (MQ=255) tgGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGa < 1:6529917/150‑1 (MQ=255) tgGAAAAGCCAGGGGTGGATCGCTGAGCGTCACTATT‑GGCGGGGGATCGGAAGGAGTGCGTGATTTTTCGCCAGTCTTGCGGACTTCCGCAAGCCTGGGGAAAACGTCAGCCCGGCTGGGGAAGGCGGCTCAGGCTGCGCCAGGCGTCGa < 2:526682/150‑1 (MQ=255) ggAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCACGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGaa < 1:706226/150‑1 (MQ=255) aaaGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCt > 2:3412415/1‑150 (MQ=255) aaGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTg > 1:8690554/1‑150 (MQ=255) aaGCCTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTg > 1:661914/1‑150 (MQ=255) aGCCGGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGt < 2:8466269/150‑1 (MQ=255) cTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGa < 1:2305289/150‑1 (MQ=255) cTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGa < 1:4733267/150‑1 (MQ=255) cTGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGa > 1:7315800/1‑150 (MQ=255) cTGGGGTGGATCGCTGAGCGTCAGTA‑T‑TGGCGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGAc < 1:2949893/150‑1 (MQ=255) tGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGAc > 1:430909/1‑150 (MQ=255) tGGGGTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGAc > 2:6924180/1‑150 (MQ=255) ggggTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACg > 1:9636967/1‑150 (MQ=255) ggggTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACg > 1:8941794/1‑150 (MQ=255) gggTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACgg > 2:6044416/1‑150 (MQ=255) gggTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACgg > 2:3817694/1‑150 (MQ=255) gTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGcc < 1:1409999/150‑1 (MQ=255) gTGGATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGcc < 2:9886153/150‑1 (MQ=255) ggATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAg > 1:11044513/1‑150 (MQ=255) ggATCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAg < 2:1292978/150‑1 (MQ=255) aTCGCTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCCggg > 2:1199660/1‑150 (MQ=255) cTGAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAg > 1:4348739/1‑150 (MQ=255) gAGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGATTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGcc > 2:5775407/1‑150 (MQ=255) aGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCa > 2:8908268/1‑150 (MQ=255) aGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCa < 2:4396268/150‑1 (MQ=255) aGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCa > 2:3326307/1‑150 (MQ=255) aGCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCa < 1:604237/150‑1 (MQ=255) gCGTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAg < 2:10173478/150‑1 (MQ=255) gTCAGTATT‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGAt > 2:6587330/1‑150 (MQ=255) | AGCGGTGTGCTCAAAGACTGATCAGGCGCTTTGCAGGGCTTCTTCCGACGAGTTATCCACGCGCCTGCGGGGAGGAGAAGGCAGGTCTATGCACAAAGTACGTGCATGAACCTGTGGAAAAGCCTGGGGTGGATCGCTGAGCGTCAGTA‑T‑GGCGGGGGATAGGAAGGAGTGCGTGTTTTTTCGCCAGGCTTGCGGAGTTCCGCAAGCCTGGGGATAACGTCAGCCCGGCTGGGGAAGGCGGCGCAGGCTGCGCCAGGCGTCGAAGCTGTAGACGGCCAGGGCGAGCCAGATGA > NC_008463/558902‑559194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |