BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_008463	1,763,534	0	T	G	30.6%	409.7 / 31.7	308	L13R (CTC→CGC)	PA14_RS08240	RHS repeat protein
Reads supporting (aligned to +/- strand): ref base T (74/128); new base G (88/1); total (178/130)
Fisher's exact test for biased strand distribution p-value = 9.96e-28
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 331 total aligned reads displayed.

TGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCCT  >  NC_008463/1763385‑1763660

tGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccct                                                                                                                                <  1:10205438/150‑1 (MQ=34)

tGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGGCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccct                                                                                                                                <  1:7762290/150‑1 (MQ=17)

   tcctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGcgccctcgc                                                                                                                             >  1:9492263/1‑150 (MQ=21)

    cctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctcgcc                                                                                                                            <  1:7380771/150‑1 (MQ=34)

    cctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgcccgcgcc                                                                                                                            >  2:3278394/1‑150 (MQ=21)

     ctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctcgccc                                                                                                                           <  2:4392008/150‑1 (MQ=34)

      tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctcgccct                                                                                                                          <  2:5180379/150‑1 (MQ=34)

      tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctcgccct                                                                                                                          <  1:4322755/150‑1 (MQ=34)

      tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctcgccct                                                                                                                          <  1:2330289/150‑1 (MQ=34)

       cccGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCCGCCCCCCGTACTTCCCCCGTCTCGgcgcccgcgcccgg                                                                                                                         >  2:2434336/1‑148 (MQ=255)

       cccGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTg                                                                                                                         <  1:5932806/150‑1 (MQ=34)

          ggTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGcc                                                                                                                      <  1:7974499/150‑1 (MQ=34)

           gTGAAGCTCAGCGAGCCCGGTCGGAACACCCGCTACAAGAACGACGCCGAGGGACGCAACACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCAATACTTACCCCGTCACGGAGGACTCGCCCAGGcca                                                                                                                     >  2:1203462/1‑149 (MQ=11)

             gCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTGCCCCCGGCTCGGCGCCCGCGCCCGGGCCGgc                                                                                                                   >  1:2788514/1‑150 (MQ=11)

               aGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCCTGCGCGTCCCCCCATACTTCCCCCGTCTCGGGGCCCTCGCCCGGGccggggc                                                                                                                 >  1:3852270/1‑145 (MQ=11)

                ggTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGAAGACCCCCATGCGAATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgcc                                                                                                                <  2:2890676/150‑1 (MQ=21)

                 gTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCCTGCGCTTCCCCCCAGACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCGGCgccc                                                                                                               >  2:9378487/1‑150 (MQ=255)

                  tCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccct                                                                                                              <  2:372400/150‑1 (MQ=34)

                  tCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCAGCCCCCCAGGCTGCCCCCGTGTCGGCGCCCTCGCCCAGGCCGGCgcccg                                                                                                              >  2:5406305/1‑149 (MQ=11)

                  tCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCAGGCGCATCCCCCCAGACTTCCCCCGGCTCGGCGCCCGCGGCCGGGCCGGCgccct                                                                                                              >  2:1030021/1‑150 (MQ=11)

                   cAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGGCTCGGCGCCCGCGCCCGGGCCTGCgccctg                                                                                                             >  2:7548325/1‑150 (MQ=255)

                     gCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggc                                                                                                           <  2:9280560/150‑1 (MQ=34)

                      cGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGGGGCCGCGCCCGGGCCGGCgcccgggcc                                                                                                          >  1:9692505/1‑150 (MQ=11)

                       gAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggccc                                                                                                         <  1:4540495/150‑1 (MQ=34)

                        aGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGCCCCCCCGGCGCAGCCCCCCATCCGTCCCCCGTCTCGGCGCCCGCGCCCTGGCCAGCgccctggccct                                                                                                        >  2:2394586/1‑150 (MQ=11)

                        aGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATTCTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCggcctggcccg                                                                                                        >  2:10971849/1‑149 (MQ=255)

                        aGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATCCTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggccct                                                                                                        >  2:8982372/1‑150 (MQ=21)

                        aGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggccct                                                                                                        <  1:10090230/150‑1 (MQ=34)

                        aGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTGCCCCCGTCGCGGCGCCCGCGCGCGGGCCTGCgccctggcccg                                                                                                        >  2:6366729/1‑149 (MQ=11)

                         gCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggccctg                                                                                                       <  1:4958620/150‑1 (MQ=34)

                         gCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCGCGGCGCCCTCGCCCTGGCCAGCgccctggccctg                                                                                                       >  2:1819907/1‑150 (MQ=255)

                            cGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGccc                                                                                                    <  1:7845856/150‑1 (MQ=34)

                              gTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCTGGGCTGCGCCCTGGCCCTGCCcgc                                                                                                  >  2:954903/1‑150 (MQ=18)

                               tCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCCCCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATCCTTCCCCCGTCGCGGCGCCCTCGCCCGGGGCTGCGCCGGGGCCCGGCCcgcg                                                                                                 >  1:3108906/1‑150 (MQ=11)

                                cGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCCTACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCTGGCCCGGCCCgcgc                                                                                                >  1:10726619/1‑150 (MQ=255)

                                 ggATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCCTGCGCATCCCCCCATACTTCCCCCGTCTCGGGGCCCTCGCCCGGGGCTGGGGCCAGGGCCTGCCCgcgcc                                                                                               >  1:2962105/1‑149 (MQ=11)

                                 ggATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCAGGCCTGCGCCCTGGCCCTGGCCgcgcc                                                                                               >  1:10135996/1‑149 (MQ=17)

                                 ggATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCa                                                                                               <  1:899357/150‑1 (MQ=17)

                                  gATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAg                                                                                              <  1:4822722/150‑1 (MQ=32)

                                  gATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGTCTTCCCCCGGCTCGGCGCCCTCGCCCTGGCCGGCGCCCGGGCCCGGCCCGCGCAg                                                                                              >  1:1831820/1‑150 (MQ=11)

                                     cACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCGCGGCGCCCGCGCGCTGGCCTGCGCCCTGGCCCTGCCCGCGCAggcg                                                                                           >  2:8483887/1‑150 (MQ=12)

                                          gCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGa                                                                                      <  1:9138260/150‑1 (MQ=32)

                                          gCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCTGGCCCGGCCCGCGCCGGCGGCCgc                                                                                      >  2:8942030/1‑149 (MQ=255)

                                          gCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACGGCCCCCGTCTCGGCGCCCGCGCCCTGGCCGGCGCCCTGGCCCTGCCCGCGCCGGCGGCCGa                                                                                      >  2:2508650/1‑150 (MQ=11)

                                           cTACCAGGACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCCTGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAg                                                                                     <  2:4641042/150‑1 (MQ=12)

                                               cAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGCCCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCTGGCCCAGCCCGCGCAGGCGGCCGAgcgcg                                                                                 >  2:3059114/1‑150 (MQ=12)

                                                 gTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGGCCGCGCCCGGGGCTGCGCCCGGGCCCGGCCCGCGCAGGCGGCCGCGCGCGcc                                                                               >  1:3209425/1‑150 (MQ=11)

                                                  tACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCt                                                                              <  1:5767178/150‑1 (MQ=32)

                                                    cgacgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTgg                                                                            <  1:10862909/150‑1 (MQ=32)

                                                     gacgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGa                                                                           <  1:5535110/150‑1 (MQ=32)

                                                      acgCCGAGGGACGCACGACCGGCGAGACCGTCACCACCCGCTGCCAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCCCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGag                                                                          <  2:4037633/150‑1 (MQ=12)

                                                      acgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCTGACGTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCGGGag                                                                          >  2:6444202/1‑150 (MQ=11)

                                                      acgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCGGGCCCGGCCCGCGCTGGCGGCCGGGCGCGGCGGGag                                                                          >  1:937986/1‑150 (MQ=11)

                                                       cgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCGCGCCCTGGCCGGCGCCCGGGCCCGGCCCGCGCAGGCGGCCGCGCGCGCCGGgcgc                                                                         >  2:6032730/1‑150 (MQ=11)

                                                           gAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctaca                                                                     <  1:1326694/150‑1 (MQ=17)

                                                            aGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCGTTCTTCCCCCGTCTCGGGCGCCGGGCCCGGGCCTGCGCCCGGGCCCTGCCCGCGGCTGCGGCCGAGCGGGCCGGGagcagcag                                                                    >  1:2579661/1‑145 (MQ=11)

                                                            aGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacag                                                                    <  1:9879987/150‑1 (MQ=32)

                                                            aGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacag                                                                    <  2:2696433/150‑1 (MQ=32)

                                                               gACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGTGCGCGCCTGGagctacagcga                                                                 >  2:6718182/1‑148 (MQ=17)

                                                                  gCAAGACCGGCGAGCCCGTCACCCCCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCCTACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACaa                                                              <  2:6102837/150‑1 (MQ=12)

                                                                  gCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCGGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGCGCGCGCCGGGAGCGACAGCGACaa                                                              >  1:6210371/1‑150 (MQ=11)

                                                                   cAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAAc                                                             <  1:3663748/150‑1 (MQ=32)

                                                                   cAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCAGCGCCCGGGCCCAGCCCGCGCCGGCGGCCGAGCGCGCCGGGAGCTACCGCGACCAc                                                             >  1:3267560/1‑150 (MQ=11)

                                                                      gACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCGGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCGACAACGcc                                                          >  1:7206413/1‑150 (MQ=12)

                                                                        ccGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCt                                                        <  1:6666992/150‑1 (MQ=32)

                                                                          ggCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATGCCCCCATACTACCCCCGTCTCGGCGCCCTCGCCCAGGCCTGCGCCCTGGCCCAGGCCGCGCATGCGGCCGTCCGCGCCAGGAGCAACCGCTACAACCGCCTCg                                                      >  2:7381510/1‑150 (MQ=11)

                                                                           gCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCGTACGTCCCCCGTCTCGGCGCGCTCGCGCTGGGCAGCGCCCGGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCGGGAGCGACAGCTCACACGCCCTCgg                                                     >  2:1538591/1‑150 (MQ=11)

                                                                            cGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGc                                                    <  1:5300310/150‑1 (MQ=32)

                                                                             gagaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGGCAGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCTACAGCTACAACGCCCTCGGcc                                                   >  2:8610090/1‑150 (MQ=12)

                                                                             gagaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGcc                                                   <  1:2078664/150‑1 (MQ=32)

                                                                             gagaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGGCCTGGGCTGCGGCCAGGCCCGGCGCGCGCCGGCGGCCGCGCGCGCCGGGCGCGTCAGGAACAACGCCCTCGGcg                                                   >  1:4872870/1‑149 (MQ=11)

                                                                              agaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCAGGCCCAGCCCGCGCAGGCGGCCGAGCGCGCCTGGGGCTACAGCGACAACGCCCACGGccg                                                  >  1:5175782/1‑149 (MQ=11)

                                                                                aaagTCACCTCCCGCGGACTAGGACGACCCGACTGCGCATACACCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGTCTGCGCCCTGGCCCTGGCAGCGCAGGAGGCGGTGCTCGGCTGGAGCTACAGCTACAACGCCCTCGGCCTgt                                                <  2:7019611/147‑2 (MQ=11)

                                                                                aCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCTGGCCCGGCCCGCGCCGGCGGCCGCGCGCGCCAGGAGCTACAGCTACCACGCCCTCGGCCTGa                                                >  1:6940472/1‑150 (MQ=11)

                                                                                aCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCAGGCCTGCGCCCGGGCCCAGCCCGCGCCGGCGGCCGAGCGCGCCGGGAGCGACAGCTACAACGCCCTCGGCCTGa                                                >  1:6384636/1‑150 (MQ=11)

                                                                                  cGTCACCACCCGCTGCCAAGGTCGACCCCCAGGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACATCTACAACGCCCTCGGCCTGATc                                              <  2:8138657/150‑1 (MQ=11)

                                                                                   gTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGGGGCCGCGCCCAGGCCGGCGCCCGGGGCCAGCCCGCGCCGGCGGCCGCGCGCGCCGGGAGCGACACCAACAACGCCCACGGCCTGATCg                                             >  1:8684214/1‑150 (MQ=11)

                                                                                   gTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCg                                             <  1:3386337/150‑1 (MQ=32)

                                                                                     caccacCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAg                                           <  1:1176333/150‑1 (MQ=32)

                                                                                      accaccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGACCCCCCAGGCGGCCGAGCGCGCCGGGAGCTACAGCTACAACGCCCTCGGCCAGAACGAgc                                          >  2:473732/1‑150 (MQ=11)

                                                                                       ccaccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCGGCGCCCGGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCGGGAGCTACAGCAACAACGCCCTCGGCCGGCTCGAgcg                                         >  1:10508067/1‑150 (MQ=11)

                                                                                       ccaccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAgcg                                         <  1:7515705/150‑1 (MQ=17)

                                                                                        caccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCGGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCGGGAGCTACAGCGACAACGCCCGCGGCCTGTTCGAgcgc                                        >  2:9111447/1‑150 (MQ=11)

                                                                                         accCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCAGCGCCCAGGCCCAGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAgcgcg                                       >  2:5647120/1‑150 (MQ=255)

                                                                                          cccGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCGGATCGAgcgcgc                                      >  1:9974814/1‑150 (MQ=12)

                                                                                            cGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCAGCGCCCGGGCCCAGCCCCCGCAGGCGGCCGAGCGCCCCTGGAGCTCCAGCTACAACGCCCACGGCCAGATCGAGCGCGCCg                                    >  2:9515695/1‑150 (MQ=11)

                                                                                              cTGACAAGGACGACCCCCATGCGCCTCCCCCCATCCTTCCCCCGTCTCGCCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGAc                                  <  2:1904533/150‑1 (MQ=12)

                                                                                              cTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGAc                                  <  1:8518468/150‑1 (MQ=32)

                                                                                                 aCAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGt                               <  1:7019960/150‑1 (MQ=32)

                                                                                                 aCAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCTGGCCCAGCCCGCGCAGGCGGCCGCGCGCGCCTGGAGCTACAGCTACAAAGCCCACGGCCGGATCGAGCGCGCCGACggg                               >  1:1413495/1‑149 (MQ=11)

                                                                                                  cactgaagacCCCCATGCGCATCCCCCCATACTTCCCCCGACTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTTCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTc                              <  2:5338967/143‑1 (MQ=11)

                                                                                                    aGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCcg                            <  1:397516/150‑1 (MQ=32)

                                                                                                       acgacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCgcgc                         >  2:10990085/1‑150 (MQ=32)

                                                                                                       acgacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCAGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCAGATAGAGCGCGCCGACGGTCCgcgc                         >  1:10957757/1‑150 (MQ=12)

                                                                                                        cgacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCGGGCCGGCGCCCAGGCCCGGCCCCCGCAGGCGGCCGAGCGCCCCAGGAGCTAAAGCGACAACGCCCACGGCCGGATCGAGCGCGCCGACGGTCCgcgcc                        >  1:3776932/1‑149 (MQ=11)

                                                                                                         gacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCTGGCCCAGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCAACAGCTACAACGCCCACCGCCTGATCGAGCGCGCCCACGGTCCGCGCAc                       >  2:9269730/1‑150 (MQ=11)

                                                                                                           cccccATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCAGCGCCCGGGCCCGGCCCGCGCCGGCGGCCGAGCGCGCCTGGAGCGACAGCGACCACGCCCTCGGCCTGATCGCGCGCGCCGACGGTCCGCGCACCg                     >  2:6637904/1‑150 (MQ=11)

                                                                                                            ccccATGCGCATCCCCCCCTACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGa                    <  2:9737869/150‑1 (MQ=11)

                                                                                                            ccccATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGa                    <  1:6057606/150‑1 (MQ=11)

                                                                                                                              attcTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTTGAGCTTCAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCct  <  2:598023/147‑1 (MQ=0)

TGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCCT  >  NC_008463/1763385‑1763660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`