Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 2,030,085 | 1 | . | G | 27.0% | 591.7 / inf | 319 | coding (785/1269 nt) | wecC | UDP‑N‑acetyl‑D‑mannosamine dehydrogenase |
Reads supporting (aligned to +/- strand): ref base . (114/119); new base G (48/38); total (162/157) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.13e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 340 total aligned reads displayed.
GCTAACGGAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTCTG > NC_008463/2029936‑2030233 | cTAACGGAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑g > 2:129211/1‑150 (MQ=255) aaCGGAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑ggg > 1:895091/1‑150 (MQ=255) gAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑ggggggc > 2:1904020/1‑149 (MQ=255) aaaaCAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑c < 1:5689340/150‑1 (MQ=255) tCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATc > 1:4089572/1‑150 (MQ=255) ccGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGc < 1:7065498/150‑1 (MQ=255) tGACACTAACAGTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGt < 2:9635549/150‑1 (MQ=255) acacTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCg > 2:6313784/1‑150 (MQ=255) acacTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGa > 2:2310647/1‑150 (MQ=255) cacTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCg < 2:4051444/150‑1 (MQ=255) acTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATc < 1:9921876/150‑1 (MQ=255) cTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATcc < 2:5508832/150‑1 (MQ=255) tAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATcc > 1:4256925/1‑150 (MQ=255) tAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATcc < 2:3161550/150‑1 (MQ=255) aaCATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCtg > 2:1416967/1‑149 (MQ=255) cATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCtt > 2:3714464/1‑150 (MQ=255) aTTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTgg > 1:1512725/1‑150 (MQ=255) cTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCa < 2:2974800/150‑1 (MQ=255) ttGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGTGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCg < 2:2685037/150‑1 (MQ=255) tGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCgta > 1:5006247/1‑150 (MQ=255) aaaTGAGCTGTCCATTATGTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCAGACTCGCTAATCGTAACCCGCGAGTCAATATTCTCCAGCCTGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCgttag < 1:6684493/150‑1 (MQ=255) aaTGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCgtaag > 2:6740848/1‑150 (MQ=255) aaTGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCgtaagt < 1:587034/150‑1 (MQ=255) aaTGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCgtaagta > 2:1119397/1‑150 (MQ=255) aTGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCgtaagt > 2:1849137/1‑150 (MQ=255) aTGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCgtaagta < 2:6835695/150‑1 (MQ=255) tttCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGAcc > 2:7447433/1‑150 (MQ=255) tCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCt < 2:2066478/150‑1 (MQ=255) ccATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTg < 2:2740514/150‑1 (MQ=255) cATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTgg < 2:344898/150‑1 (MQ=255) aTTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGga < 1:9702619/150‑1 (MQ=255) tATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGgag < 1:6165718/150‑1 (MQ=255) cTGTGACAAGTTGGACATCAATGTATGGGAGCAGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCACCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGc > 1:10143537/1‑150 (MQ=255) tttgACAAGTTGGTCATCATTGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGc < 2:3497796/148‑1 (MQ=255) tgtgACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCt < 1:1070775/150‑1 (MQ=255) tgACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCg > 1:2852465/1‑150 (MQ=255) gACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCg > 1:8430565/1‑150 (MQ=255) aCAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCt > 1:1188930/1‑150 (MQ=255) cAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGATTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCtt > 2:11002512/1‑150 (MQ=255) cAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTg < 1:6466447/150‑1 (MQ=255) aGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGa > 1:8859244/1‑150 (MQ=255) aGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGa > 2:8415294/1‑150 (MQ=255) gTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCATGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGAt > 2:7009866/1‑150 (MQ=255) ttGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGAtt < 1:87486/150‑1 (MQ=255) gACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCg > 2:8922253/1‑150 (MQ=255) gACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCg > 1:1045995/1‑150 (MQ=255) gACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCAACGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCg > 2:585620/1‑150 (MQ=255) tCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTg > 2:8549647/1‑150 (MQ=255) tCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGc > 2:5822881/1‑150 (MQ=255) tGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGt < 1:7447492/150‑1 (MQ=255) gTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGt > 2:10190092/1‑150 (MQ=255) tATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGt > 2:10511465/1‑150 (MQ=255) tATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CCTTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTg > 2:10315863/1‑150 (MQ=255) gggAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAg < 1:6378656/150‑1 (MQ=255) gAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTc > 2:6216550/1‑150 (MQ=255) aGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCa > 1:5370968/1‑150 (MQ=255) gCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCa < 1:3354480/150‑1 (MQ=255) gCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAat < 2:1468922/150‑1 (MQ=255) cTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAat < 2:4715245/150‑1 (MQ=255) gATCCGACTCGCTAATCGTCACCCTCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCTatg > 2:90368/1‑150 (MQ=255) aTCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAaggatg > 2:10877320/1‑150 (MQ=255) tCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAatgat < 1:3268014/150‑1 (MQ=255) ccGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAatgatg > 1:2602150/1‑150 (MQ=255) ccGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAatgatg < 2:121314/150‑1 (MQ=255) cGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATgg < 2:7146891/150‑1 (MQ=255) aCTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGaaa > 1:7967166/1‑150 (MQ=255) aCTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGaaa > 2:5098171/1‑150 (MQ=255) tCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGc < 2:9333952/150‑1 (MQ=255) cGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGcc < 2:6694336/150‑1 (MQ=255) gCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGcc < 1:445002/150‑1 (MQ=255) aTCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTtg > 2:9309749/1‑150 (MQ=255) tCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGTCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAATACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTtgt > 2:4685271/1‑150 (MQ=255) tCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGt < 2:8608190/150‑1 (MQ=255) tCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGt < 2:4513413/150‑1 (MQ=255) cACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGtt < 1:810280/150‑1 (MQ=255) cACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGtt < 1:1749837/150‑1 (MQ=255) ccGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCt < 1:6025514/150‑1 (MQ=255) gcgAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTGTGa < 2:3933906/150‑1 (MQ=255) gcgAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGaa > 1:6898716/1‑150 (MQ=255) gcgAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGaa < 2:654021/150‑1 (MQ=255) gcgAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAAc > 2:8571477/1‑150 (MQ=255) aGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAg < 1:7050587/150‑1 (MQ=255) gTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACaa > 1:1026261/1‑150 (MQ=255) gTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAg < 1:5390444/150‑1 (MQ=255) aaTATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGAtt > 1:1353686/1‑150 (MQ=255) tctcCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAAt < 1:4928937/150‑1 (MQ=255) gccagGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGt > 1:2291641/1‑150 (MQ=255) gccagGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGt < 1:3735687/150‑1 (MQ=255) cagGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTcg > 1:9236637/1‑150 (MQ=255) ggCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCgg < 2:8692902/150‑1 (MQ=255) ccGGGAGTGGGGGGGG‑CTTTGCATCGCAGTCGATCCGTGGTTCATCTTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCACTGATGGCAAGCCTTTGTGGGTTCTGAACAAGATTCAAATGGCTGTCGCGGa < 2:6032321/150‑1 (MQ=255) ccGGGAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGa > 1:3480011/1‑150 (MQ=255) ccGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAg < 1:11095861/150‑1 (MQ=255) cGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGt < 2:7278419/150‑1 (MQ=255) cGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGt < 2:1689683/150‑1 (MQ=255) gggAGTGGGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGt > 1:5421511/1‑150 (MQ=255) gggAGT‑‑GGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGttt > 2:5259268/1‑150 (MQ=255) gAGG‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGCAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTc > 2:8057487/1‑150 (MQ=255) gT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTCTg < 1:1924320/150‑1 (MQ=255) gT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTCTg > 2:2791741/1‑150 (MQ=255) | GCTAACGGAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGG‑CATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTCTG > NC_008463/2029936‑2030233 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |