Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084633,515,8640TA25.0% 581.5 / 38.5 302intergenic (+618/+266)PA14_RS16005/PA14_RS16010AAA family ATPase/DUF4354 family protein
Reads supporting (aligned to +/- strand):  ref base T (48/153);  new base A (65/2);  total (146/156)
Fisher's exact test for biased strand distribution p-value = 1.65e-28
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 315 total aligned reads displayed.

TATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAAGCA  >  NC_008463/3515716‑3516013
                                                                                                                                                    |                                                                                                                                                     
tataCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTc                                                                                                                                                      <  2:5048484/150‑1 (MQ=255)
 ataCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTTACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCa                                                                                                                                                     <  2:1596717/150‑1 (MQ=255)
    cAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCAccc                                                                                                                                                  >  2:10342387/1‑150 (MQ=255)
    cAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAccc                                                                                                                                                  <  1:8172048/150‑1 (MQ=255)
     aGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAcccc                                                                                                                                                 <  2:8215531/150‑1 (MQ=255)
      gCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTCTTGCCACCCGCAAAACCACAACCGCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCa                                                                                                                                                <  2:2935754/150‑1 (MQ=255)
       ccccTCCCTAAGCAATAGCCCATCCCCATACCTGAACGGCACAACTATTGACACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGAGGATCGGTTATTGGAATGTGGTGTTGGCCCTAACCCCaa                                                                                                                                               >  2:1711605/1‑150 (MQ=255)
         cctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCAcccccaac                                                                                                                                             >  1:6515321/1‑146 (MQ=255)
         cctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCaaac                                                                                                                                             >  2:3880733/1‑148 (MQ=255)
         cctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAACCCCAAcc                                                                                                                                             >  2:9430987/1‑150 (MQ=255)
            ccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCctc                                                                                                                                          <  1:401862/150‑1 (MQ=255)
             cctAAGCCATAGCCCTTCCCCATAACTGAACGGCACACCTATTGCCACCCGCAAAACCACATCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCctct                                                                                                                                         <  1:5090277/150‑1 (MQ=255)
               tAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCCAACCACTcc                                                                                                                                       >  2:8421044/1‑150 (MQ=255)
                   ccATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCCACCCACTCCCCCa                                                                                                                                   >  2:2252015/1‑150 (MQ=255)
                    cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAAACCTCTccccccc                                                                                                                                  >  1:9680194/1‑146 (MQ=255)
                    cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCAc                                                                                                                                  <  2:8753583/150‑1 (MQ=255)
                     aTAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGTATGTGGTGTTTGGCCTCACCCCAACCCCCTCCCCCAcg                                                                                                                                 >  1:10898545/1‑150 (MQ=255)
                      tAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTCACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTGGGGCCCAACCCCAAACCACTACCCCAcgc                                                                                                                                >  2:2014979/1‑150 (MQ=255)
                        gCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAACCCACACCCGCCCGCgg                                                                                                                              >  2:3272371/1‑150 (MQ=255)
                         cccTTCCCCATACCTGAACGGCACACCTCTTGCCACCCGCAAAACCACACCCGCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCggg                                                                                                                             <  1:3607755/150‑1 (MQ=255)
                              ccccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAgg                                                                                                                        <  2:9878359/150‑1 (MQ=255)
                              ccccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAgg                                                                                                                        <  1:1476333/150‑1 (MQ=255)
                                 cATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAggggg                                                                                                                     <  1:9540472/150‑1 (MQ=255)
                                    aCCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAAACCACACCCGCACGCCGGGGAGGGGGGCg                                                                                                                  >  1:8054905/1‑150 (MQ=255)
                                    aCCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCACTAAACCCAACCCTCTCCCCCACGCGGGAGAGGGGGCCg                                                                                                                  >  2:8311972/1‑150 (MQ=255)
                                       tGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCACCCACTACCCCACCCGGGAGAGGGGGGCgggg                                                                                                               >  1:5687981/1‑149 (MQ=255)
                                        gAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAACCCGCGCCCGCACCCGGGAGTGGGGggcgggcg                                                                                                              >  1:4198483/1‑150 (MQ=255)
                                           cGGCACACCTATTGCCACCCGCAAAACCACCCCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAAGGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGc                                                                                                           <  2:7329473/150‑1 (MQ=255)
                                             gCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCTCAACCGCACGCGGGAGCGGGGGCCGGGCGGGccg                                                                                                         >  2:9819293/1‑149 (MQ=255)
                                              cacaCCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAACCACTACCCCCCGCCGGAGAGGGGGCCGGGCGTggcgg                                                                                                        >  2:2121036/1‑146 (MQ=255)
                                               acacCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAACCACACCCCCCCCCGGGAGGGGGGGGCGGGCGTGcggtg                                                                                                       >  1:6264843/1‑146 (MQ=255)
                                                 acCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAACCACTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCGtgtg                                                                                                     >  2:6895825/1‑150 (MQ=255)
                                                  ccTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTgg                                                                                                    <  1:4561870/150‑1 (MQ=255)
                                                     aTTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCGTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCCCGCGGGAGAGGGGGGGGGGGGTGCCTGGTGGGtg                                                                                                 >  2:2381067/1‑149 (MQ=255)
                                                      ttGCCACCCGCAAAACCACCACCGCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCg                                                                                                <  1:2308800/150‑1 (MQ=255)
                                                        gCCACCCGCAAAACCCCCACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGac                                                                                              <  1:521637/150‑2 (MQ=255)
                                                        gCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAg                                                                                              <  2:7548039/150‑1 (MQ=255)
                                                         ccACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCAAAACCCCACGCGGGCGAGGGGGCCGGGCGTGGCGTGTggggggggg                                                                                             >  1:190825/1‑144 (MQ=255)
                                                             ccGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCct                                                                                         <  1:7394589/150‑1 (MQ=255)
                                                               gCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTGGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCTCTCCCGCCGGCGGGTGAGGGGGCCGGGCGTGGCTGGTGGGGGGCGCGCctcg                                                                                       >  2:6404064/1‑150 (MQ=255)
                                                                cAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgc                                                                                      <  2:5913978/150‑1 (MQ=255)
                                                                 aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAGTGTGGTGTTGGGCCGCACCCCGACCCGGTCCCGCACGCGGGTGAGGGGGCCGGGGGGGGCATGTGGGGCGGGGGCcgcgcg                                                                                     >  2:7198793/1‑149 (MQ=255)
                                                                 aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACCCCCCCACCCACTCCCCCACGCGGGGGTGGGGGCCCGGCGGGCCGGGTGGGTGGTGCGCcgcgcg                                                                                     >  1:1343610/1‑149 (MQ=255)
                                                                 aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCACAACCCCACGCCGGAGAGGGGGCCGGGCGTGCCGTGGGGGTCGCGCGCcacgct                                                                                     >  2:5759273/1‑150 (MQ=255)
                                                                 aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACAACCCAAACCACTACCGCCCGCGGGAGATGGGGCCGGGCGTGCCGTGTGGGTCGAGCGCcacgcg                                                                                     >  2:3511796/1‑149 (MQ=255)
                                                                   aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctcg                                                                                   <  1:7018804/150‑1 (MQ=255)
                                                                          aCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCACCCACACCCCCACCCCGGGGCGGGGGGCGGGGGTGGCGTTTGGGGGGAGCGCCACGCACGGGCGCac                                                                            >  1:7965906/1‑149 (MQ=255)
                                                                          aCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCACCCGCACGCGGGGGAGGGGGCCGGGCGTGCCTGGTGGGTCGAGCGCCGCGCTCGGGCGCAg                                                                            >  2:2466826/1‑150 (MQ=255)
                                                                           ccTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGc                                                                           <  1:7282196/150‑1 (MQ=255)
                                                                             tCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCt                                                                         <  1:259504/150‑1 (MQ=255)
                                                                             tCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCCCACCCCCAACCAATCCCCCACCCGGGGGAGGGGGCCGGGCGTGGCTTGTGGGTCGAGCGCCTCGCTCGGGGGCAGcca                                                                         >  1:6910488/1‑149 (MQ=255)
                                                                             tCCCCCGCTGCTAACCGCAATAGCTGCGGCTGGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCCACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCt                                                                         <  2:1352458/150‑1 (MQ=255)
                                                                               ccccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAACCCCAACCCTCAACCCCACGCGGGGGGGGGGGGCGGGCGGGCCGTGTTGGGGGGGCGCCGCGCGCCGGCGCAGCCCgg                                                                       >  2:5108880/1‑150 (MQ=255)
                                                                                cccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCACTCCCCCCACCGGGAGAGGGGGCCGGGCGTGGCTTGTGGGTCGAGCGCCACGCGCGGGCGCAGCCAggt                                                                      >  2:10820947/1‑149 (MQ=255)
                                                                                 cctctgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGaa                                                                     <  2:10519401/147‑1 (MQ=255)
                                                                                  cGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAAc                                                                    <  1:6882779/150‑1 (MQ=255)
                                                                                    ctgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCACACCCCCACCCCGGCGGGGGGGGCGGGCGTGCCGGGTGGGGCGAGCGCCGCGCGCGGGCGCCGCCCGGAACgc                                                                  >  1:7161048/1‑149 (MQ=255)
                                                                                     tgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAACCCAACCCTCACCCCCACGCGGGAGAGGGGGGCGGGCGTGGCGTGTGGGTCGAGCGCCACGCTCGGGGGCAGCCGGGAACGAt                                                                 >  2:1156857/1‑150 (MQ=255)
                                                                                        tAACCGCAATAGCTGCGGCTTGTGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACACTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTc                                                              <  1:11183184/150‑1 (MQ=255)
                                                                                        tAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAACCCCAACCCGCACCCCCACGCGGGAGAGGGGGGCGGGCGTGCCGTGGGGGTCGAGCGCCGCCCACCGGCGCCGCCAGGTACGAttta                                                              >  2:6013260/1‑147 (MQ=255)
                                                                                          aCCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAACCAAAACCCCAACCCGGGGCGGGGGGCGGGCGGGGCGTGTGGGTGGGGCGCCACGCGCGGGGGCAGGCCGGGACGAtttata                                                            >  1:6124905/1‑145 (MQ=255)
                                                                                           ccGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTAc                                                           <  2:9066590/150‑1 (MQ=255)
                                                                                            cGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTAcc                                                          <  1:5861995/150‑1 (MQ=255)
                                                                                            cGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCCACCCACTCACCCCCGCCGGAGAGGGGGCCCGGCGTGCCGTGTGGGGCGAGCGCCGCGCGCGGGCGCAGCCAGGCACGATGTCGAcc                                                          >  2:4383030/1‑150 (MQ=255)
                                                                                                 tAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTccc                                                     <  1:8517861/150‑1 (MQ=255)
                                                                                                   gcggCGGCTTGAGTGTCGCGGCTCGGTTTTTGGAATGTGGTGTTGGCCCTCCCCCCCACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGGGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGAGGTCTACCCTCCCCt                                                   <  2:6155274/147‑1 (MQ=255)
                                                                                                   gCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCt                                                   <  1:3212387/150‑1 (MQ=255)
                                                                                                   gCTGCGGCTTGAGTGTCGCGGATCGGTTTTGGGAATGGGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCt                                                   <  2:5666546/150‑1 (MQ=255)
                                                                                                    cTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCAAAACCCAAACCACAGCCCCAACCCGGAGATGGGGCCGGGCGTGGCGAGTTGGTCGCGGGCCACCCTCGGGCGCACCCAGGAACACTGTCGAACCAccccaa                                                  >  2:4741812/1‑148 (MQ=255)
                                                                                                     tGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACAACCCAAACCAAACCCCCCACCGGGAGAGGGGGCCGGGGGTGGCTTGTGGGTAGGGCGCCTAGCTAGGGGGCCGCCGGGGACGGTGTATTACCACCCCTAg                                                 >  1:10692387/1‑150 (MQ=255)
                                                                                                      gCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTTGCCCTCACCCCAAACCACAACCGCCCCCGGGCGTGGGGGCCGGGGGTGCCGTGTGGGTCGAGCGCCTCGCACGGGCGCAGCCTGGAACGATGTCTACCCAccccgatg                                                >  2:4254960/1‑146 (MQ=255)
                                                                                                      gCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAgg                                                <  2:2776589/150‑1 (MQ=255)
                                                                                                       cGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCAACCACGACCCCCCCCGGGCGGGGGGGGCGGGGGGGGCATGTTGGGCGGGCGCCACGGGCGGGCGCCGCCGGGGAAGATGTCTACCCACCCCGAGGc                                               >  1:10989929/1‑150 (MQ=255)
                                                                                                        ggCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCACACCCCCCCCCGGGGGAGGGGGCCGGGCGGGGCGTGTGGGTGGGGCGCCACGCTCGGGGGCCGCCCGGGAAGATTTTTAACCAACCCCAGGcc                                              >  1:8897440/1‑150 (MQ=255)
                                                                                                             gAGTGTCGCGGATCGGTTTTTGGAAAGTGGTGTTGGCCCGAACCCCAACCCACTCCCCCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCGCGCTCGGGCGCCGCCAGGAACGATGTCTACCCACCCCAAGGCCCCggg                                         >  2:8007796/1‑150 (MQ=255)
                                                                                                              agggtCGCGGATCGGATTTTGGACTGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGCGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCCAGGCCCCGGGt                                        <  2:5207891/147‑1 (MQ=255)
                                                                                                              aGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGTGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGt                                        <  1:11156795/150‑1 (MQ=255)
                                                                                                               gtgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCACTACCGCCCGCGGGAGAGGGGGCCGGGCGTGGCATGTGGGTCGAGCGCCACGCACGGGCGCAGCCTGGAACGATGTCAACCCTCCCCTAGGCCCCgggga                                       >  2:7055397/1‑148 (MQ=255)
                                                                                                               gtgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAAACCCAAACCACTACCGCAACCGGGAGAGGGGGGCGGGAGTGGCGTTTGGGTGGATCGCCTCGCTCGGGCGCATACGGGCACGATGTGTAACCTCGCCTATGCGCCgggga                                       >  2:5854980/1‑148 (MQ=255)
                                                                                                                tgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTAt                                      <  2:10006981/150‑1 (MQ=255)
                                                                                                                 gtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGACGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATc                                     <  2:1884442/150‑1 (MQ=255)
                                                                                                                 gtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAACCAAACCCGCACCCGGGAGACGGGGGCGGGCGTTCCGTGTGGGTCGAGCGCCGCGCTCGGGCGCCGCCTGGTACCATGTCTACCCTCCCCAAGGCCCCGGGTATc                                     >  2:10351739/1‑150 (MQ=255)
                                                                                                                  tCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCCCCCCTAGGCCCCGGGTATCt                                    <  2:9631998/150‑1 (MQ=255)
                                                                                                                        aTCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAAtt                              <  1:3309253/150‑1 (MQ=255)
                                                                                                                         tCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTc                             <  1:2164778/150‑1 (MQ=255)
                                                                                                                               tttGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGcccc                       <  1:7622444/150‑1 (MQ=255)
                                                                                                                                      tgtgGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagccca                <  1:2081979/150‑1 (MQ=255)
                                                                                                                                            gtTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGGCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCacc          >  2:457102/1‑148 (MQ=255)
                                                                                                                                             ttGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAAcc         <  2:9138331/150‑1 (MQ=255)
                                                                                                                                             ttGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAAcc         >  1:2882872/1‑150 (MQ=255)
                                                                                                                                             ttGGCCCACCCCCCAACCCTCTCCCGCACGCGCGAGAGGGGGCCGGGCGTGCCCTGTGGGTCGAGCGCCTCGCTCGGGCTCAGCCTGGACCGATGTCTACCCTCCCCTAGGCCCCGGGGATCTGGAATTCGGCCCCCAGCCCAGGCAAcc         <  2:10996673/150‑1 (MQ=255)
                                                                                                                                              tGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCa        <  2:10196462/150‑1 (MQ=255)
                                                                                                                                                gCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaa      <  1:9230302/150‑1 (MQ=255)
                                                                                                                                                 ccctCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa     >  1:10055589/4‑150 (MQ=255)
                                                                                                                                                 ccctCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa     <  2:7913241/147‑1 (MQ=255)
                                                                                                                                                 ccctCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa     <  2:6737494/147‑1 (MQ=255)
                                                                                                                                                  cctCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAAg    <  2:4494690/148‑1 (MQ=255)
                                                                                                                                                  cctCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAAg    <  2:5627342/148‑1 (MQ=255)
                                                                                                                                                  cctCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCGAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAAg    <  2:2302873/148‑1 (MQ=255)
                                                                                                                                                   ctCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAAGc   <  2:2634232/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAAGCA  >  NC_008463/3515716‑3516013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: