Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084631,763,5340TG27.1% 429.1 / 32.3 305L13R (CTC→CGC) PA14_RS08240RHS repeat protein
Reads supporting (aligned to +/- strand):  ref base T (57/150);  new base G (76/1);  total (153/152)
Fisher's exact test for biased strand distribution p-value = 4.65e-31
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 329 total aligned reads displayed.

TGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCCTCTAT  >  NC_008463/1763385‑1763664
                                                                                                                                                     |                                                                                                                                  
tGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctc                                                                                                                                   <  1:9717130/151‑1 (MQ=33)
tGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctc                                                                                                                                   <  1:7163700/151‑1 (MQ=33)
 gTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctcg                                                                                                                                  <  1:6336265/151‑1 (MQ=33)
   tcctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGcgcgcgcgcc                                                                                                                                >  1:10400960/1‑151 (MQ=16)
    cctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGCGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGcgccctcggcc                                                                                                                               >  1:2869543/1‑151 (MQ=16)
    cctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCCTGCGCGGCCCCCCCTAGGTGCCCCGGCGCGgcgcccgcgccc                                                                                                                               >  2:3259231/1‑151 (MQ=11)
    cctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGcgccctcgccc                                                                                                                               >  1:7992159/1‑151 (MQ=18)
     ctccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTGCCCCCGTCTCGGcgccctcggcct                                                                                                                              >  2:282691/1‑151 (MQ=18)
      tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGCCCCCCATGCGCGTCCCCCCAGACGTCCCGCGTCTCGgcgcccgcgcccgg                                                                                                                             >  1:3882613/1‑149 (MQ=11)
      tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTg                                                                                                                             <  2:3390888/151‑1 (MQ=33)
      tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTg                                                                                                                             >  1:1809310/1‑151 (MQ=18)
      tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCGCGGCCTg                                                                                                                             >  2:3534741/1‑151 (MQ=16)
       cccGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTgg                                                                                                                            <  1:8501783/151‑1 (MQ=33)
         cGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGGGCCCGCGCCCGGGcc                                                                                                                          >  1:8100679/1‑151 (MQ=16)
           gTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTg                                                                                                                        >  1:9775463/1‑151 (MQ=18)
            tGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTgc                                                                                                                       <  1:5615017/151‑1 (MQ=33)
            tGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCGgc                                                                                                                       >  1:10655146/1‑151 (MQ=18)
               aGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCAGCgcc                                                                                                                    >  1:9596570/1‑151 (MQ=18)
                  tCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCAGCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctg                                                                                                                 <  1:1028247/151‑1 (MQ=18)
                       gAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGCCCCCCATGCGCGGCCCCCCATAGTGCCCCCGGGGCGGCGCCCGCGCCCGGGCCGGCgcgctggcccg                                                                                                            >  2:10400466/1‑150 (MQ=11)
                       gAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggccct                                                                                                            <  2:8805122/151‑1 (MQ=33)
                          cccGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCGGCGCCCTGggccggcc                                                                                                         >  1:9423181/1‑151 (MQ=16)
                            cGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCcg                                                                                                       <  1:1530137/151‑1 (MQ=33)
                               tCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCgcgc                                                                                                    <  1:2597108/151‑1 (MQ=32)
                                cGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGGCTCGGCGCCCGCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCa                                                                                                   >  2:2179829/1‑151 (MQ=14)
                                  gATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATCCTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAgg                                                                                                 <  1:3185432/151‑1 (MQ=14)
                                  gATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAgg                                                                                                 <  1:4536763/151‑1 (MQ=31)
                                   aTCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAggc                                                                                                <  1:1277029/151‑1 (MQ=31)
                                   aTCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAggc                                                                                                <  1:8959662/151‑1 (MQ=31)
                                     cACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAggcgg                                                                                              <  1:6428061/151‑1 (MQ=31)
                                     cACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCGCGCCCGGGCCGGCGCCCTGGCCCTGCCCGCGCAggcgg                                                                                              >  2:4613134/1‑151 (MQ=9)
                                      aCCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCTTCCCCCCCTGCGTCCCCCGTCTCGGCGCCCGCGCCCGGGCCGGCGCCCTGGGCCGGCCCGCGCCggcggc                                                                                             >  2:313572/1‑151 (MQ=11)
                                      aCCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAggcggc                                                                                             <  1:5054736/151‑1 (MQ=31)
                                       cccGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGcc                                                                                            <  2:8404045/151‑1 (MQ=14)
                                         cGCTACCACTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGTCGACCCCCTTGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGa                                                                                          <  2:7088247/151‑1 (MQ=9)
                                           cttccAGTACGACGCCGAGGGACGCAAGACCTGCGAGACCGTCACCACCCGCTGACAATGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCGTCGCCATGGGCTGCGACCTGGCCCTGCCAGCGCAGGCGGCCGAgc                                                                                        <  2:7705567/148‑1 (MQ=11)
                                           cTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAgc                                                                                        <  1:6627017/151‑1 (MQ=31)
                                           cTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCGGGCCCTGCCCGCGCCGGCGGCCgcgc                                                                                        >  1:2691710/1‑151 (MQ=255)
                                            tACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAgcg                                                                                       >  1:5268737/1‑151 (MQ=14)
                                                  cacgacgCCGAGGGACGCACGCCCGGCGAGCCCGCCACCACCCGCTGACAAGGACGACCCCCATGCGCCTCCCCCCAGACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCCGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCTg                                                                                 <  2:495648/150‑1 (MQ=11)
                                                   acgacgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTgg                                                                                <  1:7433242/151‑1 (MQ=14)
                                                   acgacgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCGGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTgg                                                                                <  2:9101790/151‑1 (MQ=14)
                                                     gacgCCGCGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGag                                                                              <  2:7890059/151‑1 (MQ=14)
                                                     gacgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTGCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGag                                                                              <  2:4399780/151‑1 (MQ=14)
                                                      ccgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCCTACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagc                                                                             <  1:6938440/150‑1 (MQ=14)
                                                      acgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagc                                                                             <  2:2700321/151‑1 (MQ=31)
                                                      acgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGGCCGGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagc                                                                             >  2:4542470/1‑151 (MQ=9)
                                                       cgCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagct                                                                            <  2:10428867/151‑1 (MQ=14)
                                                           gAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATGCTTCCCCCGTCTCGGCGCCCGCGCCCGGGGCGGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGggctactg                                                                        >  2:5165487/1‑149 (MQ=11)
                                                           gAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCGGCGCCCGGGCCCGGCCCGCGCCGGCGGCCGGGCGCGCCGGGagctaccg                                                                        >  1:7768435/1‑149 (MQ=11)
                                                              ggACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacagcta                                                                     <  2:2004766/151‑1 (MQ=31)
                                                               gACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacagctac                                                                    <  2:10122776/151‑1 (MQ=31)
                                                                  gCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCGCGCGGCCGGGGCGGCGCCCGGGGCCTGCCCGCGCCGGCGGCCGAGCGCGCCGGGTGCTACAGCGTCAAc                                                                 >  1:1976916/1‑151 (MQ=11)
                                                                  gCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAAc                                                                 <  1:6815963/151‑1 (MQ=31)
                                                                     aGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCGCGGCGCCCGCGCCCGGGCCGGCGCCCGGGCCCGGCCCCCGCCGGCGGCCGCGCGCGCCGGGTGCGACAGCGGCAACGcc                                                              >  1:955153/1‑151 (MQ=11)
                                                                     aGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGcc                                                              <  1:3083992/151‑1 (MQ=14)
                                                                        ccGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGccccc                                                           <  1:472520/151‑3 (MQ=14)
                                                                        ccGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTc                                                           <  2:10617726/151‑1 (MQ=31)
                                                                        ccGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCTGGCCCTGCCCGCGCCGGCGGCCGCGCGCGCCGGGAGCTACAGCTACCACGCCCTc                                                           >  2:10673100/1‑151 (MQ=11)
                                                                          ggCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCCTGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGGCGGCGGGCGGGGCCGGCCCGCGCAGGCGGGCGGGCGCGCCGGGCGGGACCGCGACACCGCCCGCgg                                                         >  1:4824959/1‑151 (MQ=2)
                                                                          ggCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGGGCCCGCGCCCCGGCCGGCGCCCGGGGCCTGCCCCCGCCGGGGGCCGAGGGCGCCGGGTGCGACCGCGACCACGCCCGCgg                                                         >  1:9031214/1‑151 (MQ=11)
                                                                          ggCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCgg                                                         <  1:10607600/151‑1 (MQ=31)
                                                                          ggCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCgg                                                         <  1:10122052/151‑1 (MQ=31)
                                                                           gCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGc                                                        <  1:3528019/151‑1 (MQ=31)
                                                                             gagaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCGCGTCTCGGCGCCCGCGCCCTGGCCAGCGCCCTGGCCCTGCCCGCGCCGGCGGCCGAGCGCGGCGGGAGGGACAGCTACACCGGCCGCGGccg                                                      >  2:3673584/1‑150 (MQ=11)
                                                                             gagaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCAGGCCCTGCCCGCGCAGGCGGCCGGGCGCGCCGGGAGCGACCGCGACCACGCCCGCGGCCt                                                      >  2:876477/1‑151 (MQ=11)
                                                                              agaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGGGCCCGCGCCCAGGCCGGCGCCCAGGGCCTGCCCGCGCCGGCGGCCGCGCGCGCCGGGGGGTCCAGGGACAACGCCCACGGccgg                                                     >  1:4636790/1‑149 (MQ=11)
                                                                              agaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCGGCGCCCAGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGCGCTACCGCGACAACCCCCTCGGccag                                                     >  2:1861628/1‑149 (MQ=11)
                                                                               gaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGa                                                    <  1:2333023/151‑1 (MQ=31)
                                                                               gaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGa                                                    <  1:7262696/151‑1 (MQ=31)
                                                                                aCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCGGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCGCGGCCTgct                                                   >  1:7634915/1‑149 (MQ=9)
                                                                                 ccGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATc                                                  <  1:3975449/151‑1 (MQ=31)
                                                                                  cGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCTGGAGCGACAGCTACAACGCCCTCGGCCTGATCg                                                 >  2:5308572/1‑151 (MQ=14)
                                                                                    tCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATCCATCCCCCCGCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAg                                               <  2:7333076/151‑1 (MQ=9)
                                                                                    tCACCACCCGCTGACAAGGACGACCCCCATGCGCAGCCCCCCAGACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCGGGCCCTGCCCGCGCACGCGGCCGCGCGCGCCGGGCGCGACAGCGCCAACGCCCTCGGCCGGATCgcg                                               >  2:9123040/1‑149 (MQ=11)
                                                                                     caccacCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAgc                                              <  2:748047/151‑1 (MQ=31)
                                                                                     caccacCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCGCGGCGCCCTCGCCCTGGCCTGCGCCCGGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCGCCCGCTACAACGCCCTCGGCCTgagcgagc                                              >  2:5968400/1‑151 (MQ=11)
                                                                                      accaccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCTGGCCCAGCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCTACAGCGACAACGCCCGCGGCCAGCTCGAgcg                                             >  1:7505858/1‑151 (MQ=11)
                                                                                      accaccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTGCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGTTCGAgcg                                             <  2:9645514/151‑1 (MQ=14)
                                                                                       ccaccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCGGGCCCTGCCCGCGCAGGCGGCCGGGCGCGCCGGGAGCTACAGCTACAACGCCCGCGGCCGGATGGAgcgc                                            >  1:8801917/1‑151 (MQ=11)
                                                                                          cccGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGGGCCCCCGCCCGGGCCAGCGCCCAGGCCCAGCCCCCGCCGGCCGCCCCGCGCGCCGGGCGCGACAGCGACAACGCCCACGCCCAGGTCGCGCGCGcc                                         >  1:6274992/1‑151 (MQ=2)
                                                                                          cccGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGcc                                         <  1:9988048/151‑1 (MQ=31)
                                                                                           ccGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCg                                        <  1:8268893/151‑1 (MQ=31)
                                                                                             gCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGAc                                      <  1:3345998/151‑1 (MQ=14)
                                                                                              cTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCTGGCCTGCGCCCTGGCCCAGCCCGCGCAGGCGGCCGAGCGCGCCGGGCGCGACAGCTCCCACGCCCTCGGCCGGATCGAGCGCGCCGACg                                     >  1:10483517/1‑151 (MQ=11)
                                                                                               tGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCGGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACgg                                    <  2:2641819/151‑1 (MQ=14)
                                                                                                gACACGGACGACCCCCAGGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGt                                   <  2:4711102/151‑1 (MQ=14)
                                                                                                  cAATGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTcc                                 <  2:699665/151‑1 (MQ=14)
                                                                                                  cAAGGACGACCCCCATGCGCAGCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTcc                                 <  2:6742216/151‑1 (MQ=14)
                                                                                                   aaGGACGACCCCCATGCGCATCCCCCCATTCTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCACGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCcg                                <  1:4237319/151‑1 (MQ=14)
                                                                                                   aaGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCTACAGCTACAACGCCCACGGCCAGATCGAGCGCGCCGACGGTCcg                                >  2:1481639/1‑151 (MQ=9)
                                                                                                   aaGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCGTGCCAGCGCCCTGGCCCTGCCCGGGCCGGCGGCCGAGCGCGCCGGGAGCTACAGCTACAACGCCCTCGGCCAGATAGAGCGCGCCGACGGTccc                                >  1:865064/1‑150 (MQ=11)
                                                                                                       acgacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCAGGCCTGCGCCCTGGCCCAGCCCCCGCAGGCGGCCGCGCGCGCCGGGAGCGACACCGACAACCCCCTCGGCCGGATCGAGCGCGCCGCCGGTCCGCGCa                            >  1:6642851/1‑151 (MQ=11)
                                                                                                        cgacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACCCCCAGGCCTGCGCCCAGGCCCAGCCCGCCCCCGCGGCCGAGCGCGCCTGGAGCGACAGCAAAAACGCCCTCGGCCTGAACGAGCGCCCCGCCGGTCCGCGCAc                           >  1:3246737/1‑151 (MQ=11)
                                                                                                         gacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGCGCGACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCAcc                          >  2:2434667/1‑151 (MQ=14)
                                                                                                         gacCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCAcc                          <  1:9345933/151‑1 (MQ=14)
                                                                                                          acCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCAGGCCTGCGCCCAGGCCCAGCCCGCCCAGGCGGCCGCGCGCGCCTGGAGCTACAGCTAAAACGCCCGAGGCCAGCTCGAGCGCGCCGCCCGTCCGCGCAccc                         >  1:9200875/1‑150 (MQ=11)
                                                                                                            ccccATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGAt                       <  1:5790664/151‑1 (MQ=11)
                                                                                                            ccccATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCAGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCCCCGag                       >  2:643862/1‑150 (MQ=11)
                                                                                                                                acgtCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCCTCTa   <  2:10292385/148‑1 (MQ=1)
                                                                                                                                                     |                                                                                                                                  
TGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCCTCTAT  >  NC_008463/1763385‑1763664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑