BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_008463	96,391	A→G	pseudogene (243/723 nt)	tagH ←	type VI secretion system‑associated FHA domain protein TagH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_008463	96,391	0	A	G	99.8%	2130.0 / NA	545	pseudogene (243/723 nt)	tagH	type VI secretion system‑associated FHA domain protein TagH
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (241/303); minor base C (0/1); total (241/304)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 545 total aligned reads displayed.

GCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACAGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGTTGTCCAGCGTGCGCAGCACGTCCACCAGTCCTTCCACCAGACAGCGATAGGTGCGTCGGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑ACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGCCGGGGGCGTCGGCGC  >  NC_008463/96246‑96536

gcagcaGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCcgcg                                                                                                                                               >  2:1727656/1‑151 (MQ=255)

 cagcagGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGa                                                                                                                                              >  1:537099/1‑151 (MQ=255)

  agcagGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGAt                                                                                                                                             <  1:2674580/151‑1 (MQ=255)

    cagGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAg                                                                                                                                           >  2:7402892/1‑151 (MQ=255)

      ggAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAgct                                                                                                                                         <  1:4592563/151‑3 (MQ=255)

       gAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTg                                                                                                                                        <  2:2082823/151‑1 (MQ=255)

           agcaTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCggc                                                                                                                                    >  2:10006656/1‑149 (MQ=255)

            gcaTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCggcc                                                                                                                                   <  1:10236291/151‑4 (MQ=255)

            gcaTGGCTTCGTCCACGTTCGGCCCGAACTTCAGCGGGTTGTTCAGCACCGGCTGGATCATGGTCTGCGCAATCCGGAACTCGCCCTTCAGGCTGCCCCGCGCGCGCAGCACGTCCACCACTCCTTCCACCAGGCCGCGAGAGCTGCggcc                                                                                                                                   >  2:1592271/1‑148 (MQ=255)

             caTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCggccg                                                                                                                                  <  1:7452717/151‑5 (MQ=255)

              aTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGCTCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCggccga                                                                                                                                 <  2:4077134/151‑6 (MQ=255)

              aTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCggccga                                                                                                                                 >  2:1885990/1‑146 (MQ=255)

              aTGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCggccga                                                                                                                                 >  2:8824868/1‑146 (MQ=255)

               tGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGAt                                                                                                                                <  1:4967215/151‑1 (MQ=255)

               tGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGAt                                                                                                                                <  1:1929544/151‑1 (MQ=255)

                  cTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGc                                                                                                                             <  2:6376088/151‑1 (MQ=255)

                  cTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGc                                                                                                                             >  1:10101627/1‑151 (MQ=255)

                  cTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGc                                                                                                                             >  1:7015299/1‑151 (MQ=255)

                   ttCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCt                                                                                                                            >  2:7237845/1‑151 (MQ=255)

                     cgtcgACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCGTc                                                                                                                          <  1:10508040/151‑1 (MQ=255)

                      gtcgACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTcc                                                                                                                         >  1:6303143/1‑151 (MQ=255)

                       tcgACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCa                                                                                                                        >  2:7785840/1‑151 (MQ=255)

                        cgACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCAt                                                                                                                       <  2:8074915/151‑1 (MQ=255)

                        cgACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCAt                                                                                                                       <  1:4665215/151‑1 (MQ=255)

                          aCGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCt                                                                                                                     <  1:3016790/151‑1 (MQ=255)

                            gTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTgc                                                                                                                   >  1:2829840/1‑151 (MQ=255)

                            gTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTgc                                                                                                                   >  1:6816401/1‑151 (MQ=255)

                               cGGCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCt                                                                                                                <  1:7966192/151‑1 (MQ=255)

                                ggCGCGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCtt                                                                                                               <  1:8988752/151‑1 (MQ=255)

                                 gcgcGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTc                                                                                                              <  2:3861414/151‑1 (MQ=255)

                                 gcgcGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTc                                                                                                              >  1:2445151/1‑151 (MQ=255)

                                 gcgcGAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTc                                                                                                              <  2:5361494/151‑1 (MQ=255)

                                  cgcgAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCg                                                                                                             >  1:5313282/1‑151 (MQ=255)

                                    cgAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGgc                                                                                                           <  1:7114810/151‑1 (MQ=255)

                                     gAACTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGgcg                                                                                                          <  2:10551850/151‑1 (MQ=255)

                                       aCTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgcc                                                                                                        <  1:3523618/151‑1 (MQ=255)

                                       aCTTCAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgcc                                                                                                        <  2:10664910/151‑1 (MQ=255)

                                           cAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgccggcc                                                                                                    <  2:4248016/151‑1 (MQ=255)

                                           cAGCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCgccggcc                                                                                                    <  1:4372271/151‑1 (MQ=255)

                                             gCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGccggccgg                                                                                                  <  2:9100/151‑1 (MQ=255)

                                             gCGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGccggccgg                                                                                                  >  2:6721182/1‑151 (MQ=255)

                                              cGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCggg                                                                                                 >  1:6698963/1‑151 (MQ=255)

                                              cGGGTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCggg                                                                                                 <  1:9662361/151‑1 (MQ=255)

                                                ggTTGTTCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTc                                                                                               <  1:9130146/151‑1 (MQ=255)

                                                 gttgttCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCg                                                                                              <  2:4871780/151‑1 (MQ=255)

                                                 gttgttCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCg                                                                                              <  2:9301228/151‑1 (MQ=255)

                                                     ttCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCt                                                                                          <  2:8309107/151‑1 (MQ=255)

                                                      tCTGCACCGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCtt                                                                                         <  1:9529183/151‑1 (MQ=255)

                                                          caccGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑aac                                                                                    <  1:5053464/151‑3 (MQ=255)

                                                          caccGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑aac                                                                                    >  2:1125506/1‑149 (MQ=255)

                                                           accggCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑aact                                                                                   <  2:6052191/148‑4 (MQ=255)

                                                             cggCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑aactgg                                                                                 >  1:876361/2‑146 (MQ=255)

                                                             cggCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑aactgg                                                                                 >  1:10708650/2‑146 (MQ=255)

                                                               gCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGt                                                                                <  2:4489550/151‑1 (MQ=255)

                                                               gCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGt                                                                                >  1:1834609/1‑151 (MQ=255)

                                                                cTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTc                                                                               >  2:7950165/1‑151 (MQ=255)

                                                                cTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTc                                                                               <  2:9683556/151‑1 (MQ=255)

                                                                 tGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCa                                                                              <  1:10588460/151‑1 (MQ=255)

                                                                 tGGATCATGGTCTGCGCCATGCGGAACTCGCACTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCATTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTct                                                                              >  2:575513/1‑150 (MQ=255)

                                                                   gATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATg                                                                            <  1:4055034/151‑1 (MQ=255)

                                                                     tCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACAAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGcc                                                                          >  1:4231797/1‑151 (MQ=255)

                                                                          gTCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGgcgc                                                                     >  1:5539164/1‑151 (MQ=255)

                                                                           tCTGCGCCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGcgcc                                                                    <  2:9556331/151‑1 (MQ=255)

                                                                              gcgcCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCcgcg                                                                 <  1:1507397/151‑1 (MQ=255)

                                                                               cgcCATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCgcgc                                                                >  2:10176858/1‑151 (MQ=255)

                                                                                  cATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAgg                                                             <  2:2306620/151‑1 (MQ=255)

                                                                                  cATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAgg                                                             >  1:7605021/1‑151 (MQ=255)

                                                                                  cATGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAgg                                                             >  1:571491/1‑151 (MQ=255)

                                                                                    tGCGGAACTCGCCCTTCCGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGaa                                                           <  2:6248276/151‑1 (MQ=255)

                                                                                    tGCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGaa                                                           <  2:8477293/151‑1 (MQ=255)

                                                                                     gCGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAAc                                                          <  1:1581410/151‑1 (MQ=255)

                                                                                      cGGCACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCGTCCCCCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACg                                                         <  2:8754698/151‑1 (MQ=255)

                                                                                      cGGAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACg                                                         <  1:5930324/151‑1 (MQ=255)

                                                                                       ggAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGc                                                        >  2:2905400/1‑151 (MQ=255)

                                                                                       ggAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGc                                                        >  2:3547241/1‑151 (MQ=255)

                                                                                        gAACTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCGTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGcc                                                       >  2:3149326/1‑151 (MQ=255)

                                                                                          aCTCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTg                                                     <  2:2630388/151‑1 (MQ=255)

                                                                                            tCGCCCTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTgca                                                   >  1:8675159/1‑151 (MQ=255)

                                                                                                 cTTCAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAgg                                              >  2:7045460/1‑151 (MQ=255)

                                                                                                    cAGGCTGGCCCGCGCGCGCAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTcg                                           <  1:3333415/151‑1 (MQ=255)

                                                                                                           gcccgcgcgcgcAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCgccgg                                    >  1:2087798/5‑151 (MQ=255)

                                                                                                           gcccgcgcgcgcAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCgccgg                                    <  1:8287476/147‑1 (MQ=255)

                                                                                                              cgcgcgcgcAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCgccggccg                                 >  1:3794194/2‑151 (MQ=255)

                                                                                                               gcgcgcgcAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACGGGGTCGTGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGt                                >  1:2289175/1‑151 (MQ=255)

                                                                                                                 gcgcgcAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTcg                              <  1:8170051/149‑1 (MQ=255)

                                                                                                                  cgcgcAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTcgc                             >  1:3970234/2‑151 (MQ=255)

                                                                                                                   gcgcAGCACGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTcgcg                            <  2:479439/151‑1 (MQ=255)

                                                                                                                     gcagcaCGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCgcggc                          <  2:3310819/151‑1 (MQ=255)

                                                                                                                       agcaCGTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCgcggcgg                        >  2:2521922/1‑151 (MQ=255)

                                                                                                                        gcaCGTCCACCAGTCCTGCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCGACGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCgcggcggc                       <  2:5553556/151‑1 (MQ=255)

                                                                                                                            gTCCACCAGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCtt                   >  1:6517618/1‑151 (MQ=255)

                                                                                                                               caccaGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGcc                >  1:9848110/1‑151 (MQ=255)

                                                                                                                               caccaGTCCTACCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGcc                <  1:1145370/151‑1 (MQ=255)

                                                                                                                                   aGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCTTGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGCCgggg            >  2:5905354/1‑151 (MQ=255)

                                                                                                                                   aGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGCCgggg            <  1:9359695/151‑1 (MQ=255)

                                                                                                                                   aGTCCTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGCCgggg            <  1:8009688/151‑1 (MQ=255)

                                                                                                                                      ccTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGCCGGGGGCg         >  2:499465/1‑151 (MQ=255)

                                                                                                                                      ccTTCCACCAGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGCCGGGGGCg         <  1:7763649/151‑1 (MQ=255)

                                                                                                                                          ccaccaGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGCCGGGGGCGTCgg     <  1:3650921/151‑1 (MQ=255)

                                                                                                                                             ccaGGCCGCGATAGCTGCGGCCGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTCAACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGCCGGGGGCGTCGgcgc  <  1:310995/151‑1 (MQ=255)

GCAGCAGGAGCAGCATGGCTTCGTCGACGTTCGGCGCGAACTTCAGCGGGTTGTTCTGCACAGGCTGGATCATGGTCTGCGCCATGCGGAACTCGCCCTTCAGGTTGTCCAGCGTGCGCAGCACGTCCACCAGTCCTTCCACCAGACAGCGATAGGTGCGTCGGATGGCTTCCATCTGCGCTTCGGCGCCGGCCGGGTCGACCTTC‑ACTGGGTCATGCCGGCGCCGCGCAGGAACGCCTGCAGCAGGTCGCCGCCGGCCGTCGCGGCGGCGCTTGCCGGGGGCGTCGGCGC  >  NC_008463/96246‑96536

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`