Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_008463 | 2,787,829 | 2 bp→AG | pseudogene (907‑908/3090 nt) | PA14_RS13085 → | CusA/CzcA family heavy metal efflux RND transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 2,787,829 | 0 | C | A | 99.7% | 1361.9 / NA | 328 | pseudogene (907/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (136/191); total (137/191) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.18e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | NC_008463 | 2,787,830 | 0 | T | G | 99.7% | 1270.6 / NA | 328 | pseudogene (908/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (136/191); total (137/191) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.18e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 328 total aligned reads displayed.
CTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACC > NC_008463/2787685‑2787975 || cTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGa < 2:2444854/151‑1 (MQ=255) cgcACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCa > 1:10581485/1‑151 (MQ=255) cACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCACCCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCAcc < 2:3004888/151‑1 (MQ=255) cACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCAcc > 1:9960293/1‑151 (MQ=255) cACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCAcc < 2:6786817/151‑1 (MQ=255) cACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCAcc < 2:3910632/151‑1 (MQ=255) aCCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCTTGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCg > 1:2323362/1‑151 (MQ=255) aCCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCC‑AGGGGGTCAAGGCGATCACCg > 2:8937652/1‑151 (MQ=255) ccGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGAGTTCATGCTGAACGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGt < 2:2300117/151‑1 (MQ=255) ggCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCt < 2:4128864/151‑1 (MQ=255) gcgcGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTa < 2:2948582/151‑1 (MQ=255) cgcgGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTAc < 1:5544886/151‑1 (MQ=255) gcgGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACg < 2:5331224/151‑1 (MQ=255) cgGCCACCGAGAACCGCCGCGAAGTGGTTCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCATGGAGGAGATCAACCGGACCCAG‑CCCAAGGGGGTCAATGCGAACACCGTCAACGa > 2:1930871/1‑151 (MQ=255) ggCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACCGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGAc < 2:8633302/151‑1 (MQ=255) gCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGAcc < 2:4995970/151‑1 (MQ=255) ccACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCg < 2:941086/151‑1 (MQ=255) ccACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCg > 2:7675824/1‑151 (MQ=255) cACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGc < 2:1674024/151‑1 (MQ=255) cACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGc > 2:4263447/1‑151 (MQ=255) aaCGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCAccc < 1:3675703/151‑1 (MQ=255) aCGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCt > 1:3366625/1‑151 (MQ=255) gCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggt > 1:3950285/1‑149 (MQ=255) gCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggt < 2:2212257/151‑3 (MQ=255) gCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggt > 2:5156056/1‑149 (MQ=255) cgcgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtgg > 1:9609198/1‑147 (MQ=255) cgAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggac > 2:574978/1‑145 (MQ=255) gAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggaca > 2:7484310/1‑144 (MQ=255) gAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTggtggaca < 1:6031213/151‑8 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaag < 1:6880827/151‑1 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaag < 1:3118703/151‑1 (MQ=255) aTGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaaga > 2:1256231/1‑151 (MQ=255) gCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAc < 1:9469592/151‑1 (MQ=255) cTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCACGGCGATCACCGTCTACGACCGCACCACCCAGGAGGACCAGGCCGGGGCCACG‑GTGACGAAGAAcc > 2:3604697/1‑151 (MQ=255) cTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCTCCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcc < 2:5957017/151‑1 (MQ=255) cTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcc < 1:7538448/151‑1 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcct > 2:955136/1‑150 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcct < 1:10041038/151‑2 (MQ=255) gATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctg < 1:10003861/151‑3 (MQ=255) aTCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGGCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctgg > 1:1272528/1‑148 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctggt > 1:4152046/1‑147 (MQ=255) cGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtg < 2:9025394/151‑1 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCTGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg > 2:3334578/1‑151 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg < 1:114591/151‑1 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg > 1:5842987/1‑151 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg > 1:5302885/1‑151 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGaa < 2:731611/151‑1 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGaa < 1:488011/151‑1 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAg > 2:8113192/1‑151 (MQ=255) agaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAgg > 2:6307830/1‑151 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggc > 2:2514209/1‑151 (MQ=255) aCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgc < 1:10302604/151‑1 (MQ=255) cAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcg < 1:6344766/151‑1 (MQ=255) cAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcg < 1:8620559/151‑1 (MQ=255) cAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcg < 1:10720594/151‑1 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcgg > 1:8100775/1‑151 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCt > 2:1123761/1‑151 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCt < 1:10382255/151‑1 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCt > 1:1357754/1‑151 (MQ=255) gAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTgg < 1:2784008/151‑1 (MQ=255) cccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgc < 1:2965159/151‑1 (MQ=255) ccAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcgcg > 1:501488/1‑151 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTg > 2:6913548/2‑151 (MQ=255) gcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGc < 1:4798226/151‑1 (MQ=255) cgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGct < 2:3471417/151‑1 (MQ=255) gTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGAACGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGctct > 2:1371082/1‑151 (MQ=255) cggCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTc > 2:10372323/3‑151 (MQ=255) ggCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTcc < 2:9011278/150‑1 (MQ=255) gCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGACGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCt > 2:8460820/1‑151 (MQ=255) gCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCt < 1:5426187/151‑1 (MQ=255) ccAGCGCCTGGAGGAGATCAACCGGACCCCG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTg < 1:198305/151‑1 (MQ=255) cAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt < 1:8531054/151‑1 (MQ=255) aGCGCCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt < 2:7967673/151‑1 (MQ=255) gcCTGGATGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGACAACGACCGCACCCCCCTGGTGGACCAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTTGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCACTTCCTGATCCt > 2:2727998/1‑151 (MQ=255) gcCTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCt > 2:3736966/1‑151 (MQ=255) cTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg > 1:253060/1‑151 (MQ=255) cTGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg > 1:446473/1‑151 (MQ=255) tGGAGGAGATCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCgg < 1:7389737/151‑1 (MQ=255) gagaTCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACa > 1:4628139/1‑151 (MQ=255) gaTCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc < 2:4936398/151‑1 (MQ=255) aTCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAG‑ACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc < 2:6698425/151‑1 (MQ=255) tCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcg < 1:8034908/151‑1 (MQ=255) tCAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcg < 1:3286432/151‑1 (MQ=255) cAACCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgc < 1:8832390/151‑1 (MQ=255) aaCCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcg > 2:9312897/1‑151 (MQ=255) aaCCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcg > 2:1829282/1‑151 (MQ=255) aCCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgc < 1:7247423/151‑1 (MQ=255) aCCGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgc < 1:10599991/151‑1 (MQ=255) cGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcgg < 2:9123325/151‑1 (MQ=255) cGGACCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcgg < 1:8305942/151‑1 (MQ=255) aCCCTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGgcgc > 1:6653232/1‑151 (MQ=255) cccTG‑CCCAAGGGGGTCAAGGCGCTCACCGTCTACGACCGCACCCCCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCt < 1:4282628/151‑1 (MQ=255) cccTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCt < 1:6234169/151‑1 (MQ=255) cTG‑CCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGa > 1:172559/1‑151 (MQ=255) ccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAc > 1:9003486/4‑151 (MQ=255) caaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAcc < 1:9817336/149‑1 (MQ=255) caaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAcc < 1:7029955/149‑1 (MQ=255) caaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAcc < 1:1200030/149‑1 (MQ=255) aaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg > 1:6693095/2‑151 (MQ=255) gggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGGTCCTCGGCAACATCCGCGCGGCGCTGATCACCGccac < 2:6196489/151‑1 (MQ=255) || CTGCGCACCGGCGCGGCCACCGAGAACGGCCGCGAAGTGGTGCTCGGCACGGTGTTCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTG‑CCC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACC > NC_008463/2787685‑2787975 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |