BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_008463	5,315,218	Δ1 bp	coding (325/330 nt)	PA14_RS31685 →	FimD/PapC N‑terminal domain‑containing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_008463	5,315,216	0	C	.	100.0%	2765.7 / NA	558	coding (323/330 nt)	PA14_RS31685	FimD/PapC N‑terminal domain‑containing protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (281/277); total (281/277)

Only 100 of 589 total aligned reads displayed.

ACCAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAC  >  NC_008463/5315066‑5315362

  cAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgcct                                                                                                                                                  >  2:9337801/1‑150 (MQ=255)

      tGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGa                                                                                                                                             >  2:4276076/1‑151 (MQ=255)

         aCCCCGGAACCTACCCTGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCCTGCTCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGc                                                                                                                                          <  1:5037660/151‑1 (MQ=255)

           cccGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCg                                                                                                                                        <  1:9404596/151‑1 (MQ=255)

            ccGGAACCTACCATGTCGATGTCAATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGATCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCgg                                                                                                                                       >  1:9113881/1‑151 (MQ=255)

             cGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGc                                                                                                                                      >  2:8837486/1‑151 (MQ=255)

              ggAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCg                                                                                                                                     <  1:9226855/151‑1 (MQ=255)

                aaCCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTg                                                                                                                                   <  2:9814641/151‑1 (MQ=255)

                aaCCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTg                                                                                                                                   >  1:8232606/1‑151 (MQ=255)

                aaCCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTg                                                                                                                                   <  1:430326/151‑1 (MQ=255)

                    tACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAg                                                                                                                               >  1:1770267/1‑151 (MQ=255)

                     aCCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgc                                                                                                                              >  1:8385808/1‑151 (MQ=255)

                      ccATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgcg                                                                                                                             >  2:5991937/1‑151 (MQ=255)

                          gTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTg                                                                                                                         >  2:8401947/1‑151 (MQ=255)

                           tCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTgg                                                                                                                        <  2:9579288/151‑1 (MQ=255)

                           tCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTgg                                                                                                                        >  2:10454447/1‑151 (MQ=255)

                            cGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGga                                                                                                                       >  2:7148383/1‑151 (MQ=255)

                                gTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAtt                                                                                                                   >  1:2244713/1‑151 (MQ=255)

                                gTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAtt                                                                                                                   <  1:8145464/151‑1 (MQ=255)

                                gTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAtt                                                                                                                   >  1:7865990/1‑151 (MQ=255)

                                     tctcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTg                                                                                                              <  2:2834318/151‑1 (MQ=255)

                                       tcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTggg                                                                                                            <  2:10948703/151‑1 (MQ=255)

                                        cAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTgggg                                                                                                           <  1:3976709/151‑1 (MQ=255)

                                         caCGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGc                                                                                                          <  1:6266279/150‑1 (MQ=255)

                                         aaCGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGc                                                                                                          <  1:11104549/151‑1 (MQ=255)

                                           cGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTg                                                                                                        <  1:4049339/151‑1 (MQ=255)

                                            ggCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTgg                                                                                                       >  1:3716392/1‑151 (MQ=255)

                                              cAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaa                                                                                                     >  1:1379314/1‑151 (MQ=255)

                                                 cTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaagaa                                                                                                  >  2:10597317/1‑151 (MQ=255)

                                                  tACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAAc                                                                                                 <  1:2572155/151‑1 (MQ=255)

                                                        aGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGc                                                                                           >  2:6820772/1‑151 (MQ=255)

                                                        aGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGc                                                                                           >  1:9532616/1‑151 (MQ=255)

                                                               ccAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGTGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTc                                                                                    >  1:1217387/1‑151 (MQ=255)

                                                                  ggATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGAc                                                                                 >  1:9752218/1‑151 (MQ=255)

                                                                    aTCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGACGAACGCCTGCCAGGCTCGACCt                                                                               >  2:861917/1‑151 (MQ=255)

                                                                    aTCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCt                                                                               <  1:3773991/151‑1 (MQ=255)

                                                                    aTCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCt                                                                               <  1:4798373/151‑1 (MQ=255)

                                                                     tCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCtt                                                                              >  2:630736/1‑151 (MQ=255)

                                                                     tCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCtt                                                                              <  1:4943310/151‑1 (MQ=255)

                                                                      cGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTc                                                                             >  1:10740688/1‑151 (MQ=255)

                                                                       gAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCa                                                                            <  2:1339558/151‑1 (MQ=255)

                                                                       gAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCa                                                                            <  1:6038834/151‑1 (MQ=255)

                                                                          ttCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtc                                                                         <  2:9428137/151‑1 (MQ=255)

                                                                          ttCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCGCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtc                                                                         >  2:3183941/1‑151 (MQ=255)

                                                                            ccGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtctc                                                                       >  2:3527890/1‑151 (MQ=255)

                                                                              gCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTg                                                                                            <  2:5618960/128‑1 (MQ=255)

                                                                              gCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGTCCTTCAATCTCGa                                                                     >  2:7323843/1‑151 (MQ=255)

                                                                              gCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGa                                                                     <  1:1865471/151‑1 (MQ=255)

                                                                              gCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGa                                                                     <  2:194624/151‑1 (MQ=255)

                                                                                  ccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCCATCTCGACAcc                                                                 >  2:250359/1‑151 (MQ=255)

                                                                                  ccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACAcc                                                                 <  1:7002639/151‑1 (MQ=255)

                                                                                   cGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCg                                                                >  1:2911141/1‑151 (MQ=255)

                                                                                       ccGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGACGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCt                                                            >  2:8184052/1‑151 (MQ=255)

                                                                                        cggcggCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCACTCTCGACACCGCCCtt                                                           >  2:7686308/1‑151 (MQ=255)

                                                                                        cggcggCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCtt                                                           >  2:5187900/1‑151 (MQ=255)

                                                                                        cggcggCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCtt                                                           >  2:1688842/1‑151 (MQ=255)

                                                                                        cggcggCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCtt                                                           <  2:10995239/151‑1 (MQ=255)

                                                                                           cggcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTg                                                        >  2:10877670/1‑151 (MQ=255)

                                                                                             gcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgcg                                                      <  1:5333163/151‑1 (MQ=255)

                                                                                              cgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgcgc                                                     >  1:3303532/1‑151 (MQ=255)

                                                                                               gTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGcc                                                    <  1:554105/151‑1 (MQ=255)

                                                                                                  aaaCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCg                                                 >  1:8530609/1‑151 (MQ=255)

                                                                                                  aaaCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCg                                                 >  1:6684136/1‑151 (MQ=255)

                                                                                                  aaaCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCg                                                 <  2:8238602/151‑1 (MQ=255)

                                                                                                    aCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAt                                               >  2:9161892/1‑151 (MQ=255)

                                                                                                    aCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAt                                               >  1:2296569/1‑151 (MQ=255)

                                                                                                       cTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctc                                            <  1:6136683/151‑1 (MQ=255)

                                                                                                        tGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctct                                           >  1:10101147/1‑151 (MQ=255)

                                                                                                         gCTTCGGCGACCGCTTCGTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATGGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCACTCTCGACACCGCCCTTCTGCGCCTCGAtctctc                                          <  2:4719112/151‑1 (MQ=255)

                                                                                                         gCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctctc                                          <  2:7798682/151‑1 (MQ=255)

                                                                                                           ttCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCgg                                        <  2:257839/151‑1 (MQ=255)

                                                                                                             cGGCGAACGCGTCTTGCTCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTg                                      <  2:74634/151‑1 (MQ=255)

                                                                                                               gCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGcc                                    <  2:5086689/151‑1 (MQ=255)

                                                                                                                 gAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGcccc                                  <  2:3409970/151‑1 (MQ=255)

                                                                                                                  aaCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCa                                 <  1:10007242/151‑1 (MQ=255)

                                                                                                                  aaCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCa                                 <  1:3414312/151‑1 (MQ=255)

                                                                                                                  aaCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCa                                 >  2:4503063/1‑151 (MQ=255)

                                                                                                                     gCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGc                              >  1:10426540/1‑151 (MQ=255)

                                                                                                                     gCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGc                              >  2:215051/1‑151 (MQ=255)

                                                                                                                      cttcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGcc                             >  1:4555650/1‑151 (MQ=255)

                                                                                                                        tcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCct                           <  1:8833910/151‑1 (MQ=255)

                                                                                                                        tcttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGGGCAAGCGCCGGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAACTCGACACCGCCCGTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCct                           <  2:6998525/151‑1 (MQ=255)

                                                                                                                            gcgcCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCctgctg                       <  1:2746826/151‑1 (MQ=255)

                                                                                                                            gcgcCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAACTCTCGGTGCCCCAGGCCctgctg                       >  1:6800474/1‑151 (MQ=255)

                                                                                                                              gcCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGa                     <  1:9852363/151‑1 (MQ=255)

                                                                                                                              gcCGGACGCTGGGCGTCCGCCCCG‑CCTCGGAGGCCGGCGTGCTAGCGGGGGGAGATGGCCTGGGGCTGGAGGACGGCGTGCCAGGCTCGACCTGCAAGCTCGGCCCCGCCCGTCTGCGCCTCGATCTCTCGGTGCGGCGGGCCGTGCgggg                     >  2:7911589/1‑150 (MQ=255)

                                                                                                                                cGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGata                   >  2:1157896/1‑151 (MQ=255)

                                                                                                                                cGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAGTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGata                   <  2:2391155/151‑1 (MQ=255)

                                                                                                                                cGGACGCTGGGCGTCCGCCCCG‑CCTCAGAGGCCGGCGTGCAACCGCCAGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCTATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGata                   <  2:10136242/151‑1 (MQ=255)

                                                                                                                                   aCGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCa                <  2:3768837/151‑1 (MQ=255)

                                                                                                                                    cGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCaa               <  2:6152310/151‑1 (MQ=255)

                                                                                                                                     gCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAg              >  1:7266931/1‑151 (MQ=255)

                                                                                                                                       tGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGcc            <  1:4716041/151‑1 (MQ=255)

                                                                                                                                           cGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCAcgc        >  2:4129558/1‑151 (MQ=255)

                                                                                                                                            gTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCAcgcg       <  1:6560621/151‑1 (MQ=255)

                                                                                                                                            gTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCAcgcg       >  1:5725112/1‑151 (MQ=255)

                                                                                                                                             tCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCgg      <  1:7514898/151‑1 (MQ=255)

                                                                                                                                                 ccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAc  <  1:7352830/151‑1 (MQ=255)

                                                                                                                                                 ccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAc  <  2:10740688/151‑1 (MQ=255)

                                                                                                                                                 ccccg‑cctCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCGGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAc  <  2:6567979/151‑1 (MQ=255)

ACCAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTAC  >  NC_008463/5315066‑5315362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`