| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,395,470 | Δ1 bp | intergenic (‑103/+50) | PA14_RS24730 ← / ← PA14_RS24735 | hypothetical protein/ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,395,467 | 0 | G | . | 95.2% | 1627.6 / 93.6 | 399 | intergenic (‑100/+53) | PA14_RS24730/PA14_RS24735 | hypothetical protein/ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (1/8); major base . (187/174); minor base T (1/17); total (189/210) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.05e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 418 total aligned reads displayed.
TCGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAGT > NC_008463/5395317‑5395613 | tcgCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAg < 1:9916982/151‑1 (MQ=255) cgcgTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgg > 1:5986067/1‑151 (MQ=255) gTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcg > 1:5341259/1‑149 (MQ=255) gTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGATTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcg < 2:2526051/151‑3 (MQ=255) tGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcgg > 1:30156/1‑148 (MQ=255) tGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcgg > 2:5331309/1‑148 (MQ=255) tCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggc > 1:1164669/1‑150 (MQ=255) tCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggc > 2:1567211/1‑150 (MQ=255) aGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggctt > 2:9410648/1‑148 (MQ=255) aGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggctt < 2:2746377/151‑4 (MQ=255) gCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggcttt < 2:721668/151‑5 (MQ=255) cccAGACCAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTcc < 1:3339039/151‑1 (MQ=255) ccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCa > 1:5710837/1‑151 (MQ=255) ccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCa > 2:2872860/1‑151 (MQ=255) aCAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGccc < 1:8961681/151‑1 (MQ=255) cAAGGGCGGATGAGGCAGTGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGACTCCTCCTGCCGCCAGTTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGcccc > 2:10782141/1‑151 (MQ=255) cAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGcccc < 2:9730074/151‑1 (MQ=255) aGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGc > 1:7702190/1‑151 (MQ=255) cGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTc < 1:4129000/151‑1 (MQ=255) gATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCgg > 2:9110623/1‑151 (MQ=255) aTGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGc > 2:10507069/1‑151 (MQ=255) aTGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGc > 1:11172697/1‑151 (MQ=255) gAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAg < 1:8817804/151‑1 (MQ=255) gAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAg > 2:5549452/1‑151 (MQ=255) gCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGtt > 1:5238563/1‑151 (MQ=255) cAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTc > 1:4271936/1‑151 (MQ=255) cAGAGGTTACGCGGCAGGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTc < 2:5957604/151‑1 (MQ=255) agagGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTcc > 1:4418007/1‑151 (MQ=255) agGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCgg > 1:3075232/1‑151 (MQ=255) ggTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGc > 1:6694444/1‑151 (MQ=255) cgGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACgcgc > 2:9773021/1‑151 (MQ=255) aTGGCGGCAACCCCACGGGGGTTCCCAGTTTTGCGCCTACACCTGCCGCCTGGTTCCGCATACCGCCGGCGGGAACTTGTCCACAGGCCTGAAACGCACG‑TGGGC‑GGGGCTTCCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGa < 1:2529270/151‑1 (MQ=255) tGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGACCTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGAc > 1:10613905/1‑151 (MQ=255) tGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGAc < 2:8274441/151‑1 (MQ=255) ggcggcATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACt > 1:10509322/1‑151 (MQ=255) gcATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGt > 1:3736259/1‑151 (MQ=255) aTCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTcc > 2:6509190/1‑151 (MQ=255) aTCCCCACGGGGGTTCCCAGTTTTGCGCCTACCCCTGCCCCCTGGTCCCGCATAGCGCCGGCGGGAACTTGCCCACGGGGCTGAACCGCACGCGGG‑‑GGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTcc < 1:1043183/151‑1 (MQ=255) tCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCct > 1:10908845/1‑151 (MQ=255) tCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCct < 2:11039143/151‑1 (MQ=255) cctccggggggTTCCCTTTTTTGAGCCAACCCCTGCCGCCTGGTTCCGCAGAGCGCCGGGGGGAATTGGTCCACCGGGCTTAAACGC‑CGGTGGGC‑GGGGCGTCCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCctt < 1:9367312/145‑1 (MQ=255) ccTCACGGGGTTTCCCTGTTTTGACCCAACCCCTGCCGCCTGTTTCCGAATCGCGCCGGCGGCAATTTGTCCACTGGGATGAACCCCCCGCGGG‑‑GGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCctt < 1:3751582/151‑1 (MQ=255) cTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttc < 2:10094296/151‑1 (MQ=255) cACGGGGGTTCCCAGTTTTGAGCCTACCCCTGCCGCCAGGTTCCGCATAGCGCCGGCGGTAACTTGTCCACTGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt < 1:7959217/151‑1 (MQ=255) cGGGGGTTCCCAGTTTGGAGCCTACCCCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGCACCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcg < 2:8611790/151‑1 (MQ=255) gggggTTCCCTGTTTTGAGCCTACACCAGCCGCCTGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgc < 1:7320787/151‑1 (MQ=255) gggggTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgc > 1:6129221/1‑151 (MQ=255) ggTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgccgc > 2:1737247/1‑151 (MQ=255) ttCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATCGCGCCGGCGGGAACTGGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCgg < 2:676308/151‑1 (MQ=255) tCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGc > 2:4772460/1‑151 (MQ=255) ccctttttGCCCCCACACCTGCCGCCAGGTCCCCCCTCGCGCCGGCGGGAACTGCTCCACAGGGCTGAACCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCt < 2:7516841/147‑1 (MQ=255) cAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCtt < 1:9707303/151‑1 (MQ=255) gTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGt > 2:10329024/1‑151 (MQ=255) ttttGAGCCTACACCTGCCGCCAGGTTCCGCATTGCGCCGGCGGGAACTTGTCCCCAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTc < 2:8968514/151‑1 (MQ=255) tttGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACCGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTcc < 2:9872319/151‑1 (MQ=255) tttGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTcc > 2:7066224/1‑151 (MQ=255) tttGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTcc < 2:4350526/151‑1 (MQ=255) gCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgc > 1:1248365/1‑151 (MQ=255) ccTACCCCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACG‑CGGGC‑GGGGCTTTCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgcc < 1:6385425/151‑1 (MQ=255) ccTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgcc > 2:30313/1‑151 (MQ=255) cTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACCGGGCTGAACCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgccg < 2:8944797/151‑1 (MQ=255) acacCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCcgcg > 2:2353721/1‑151 (MQ=255) tGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGt > 1:5036288/1‑151 (MQ=255) gccgccTGGTTCCGCATCGCGCCGGCGGTACCTTGCCCACCGGGCGGAAACGCCCGTGGG‑‑GGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGtc < 1:2817636/151‑1 (MQ=255) cgccAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACCGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGtctc < 2:5628668/151‑1 (MQ=255) cgccAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGtctc > 1:8198794/1‑151 (MQ=255) gccAGGTTCCGCATCGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACG‑CGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTctct < 1:3510417/151‑1 (MQ=255) cAGGTTCCGCAGAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCAGGA‑GGGC‑GGGGCTTTGCAGCCCCGCCCTCGGCAGGTTCGGGCAACGCGCCGGACTCAGTCGTTCTTCGCCGCGGGCTTGTCCTTCGCCGCGTCGGTCTCttt > 2:4103553/1‑151 (MQ=255) ttCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTcc > 1:9654050/1‑151 (MQ=255) ttCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTcc < 2:2219705/151‑1 (MQ=255) tCCGCATCGCGCCGGCGGTAACTTGACCACCGGGCTGAACCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccg < 1:194452/151‑1 (MQ=255) cGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgcc < 2:5854079/151‑1 (MQ=255) gCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgccg > 2:3358797/1‑151 (MQ=255) aTAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGc < 2:1479449/151‑1 (MQ=255) tAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCGTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCt > 2:4930669/1‑151 (MQ=255) aGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCtt < 2:3621094/151‑1 (MQ=255) gcCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTc < 2:4577130/151‑1 (MQ=255) gcCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCGCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGGCTCTTTCTCCGCCGGCTTGTc > 1:10318209/1‑151 (MQ=255) gcCGGCGGGAACTTGTCCACAGGGCTGAAACGCACG‑CGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTc < 1:2083229/151‑1 (MQ=255) ccGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTcc < 1:7139898/151‑1 (MQ=255) ggcggGAACTTGTCCACAGGGCTGACACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCtt < 2:7944035/151‑1 (MQ=255) ggcggGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCtt > 1:6571173/1‑151 (MQ=255) gcggGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCttt < 1:10190608/151‑1 (MQ=255) cggGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCtttt > 1:9585404/1‑151 (MQ=255) cggGAACTTGTCCACAGGGCTGAAACGCACG‑CGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCGTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCtttt < 2:1157099/151‑1 (MQ=255) gggAACTTGGCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTc < 2:3154082/151‑1 (MQ=255) aaCTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCtt < 2:8696229/151‑1 (MQ=255) aaCTTGTCCACAGGGCTGAAACGCACG‑TGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCGTTTCCtt > 2:6320475/1‑151 (MQ=255) aaCTGGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCACCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCtt < 1:5263779/151‑1 (MQ=255) aCTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTg > 1:8071549/1‑151 (MQ=255) tGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcg < 1:1510724/151‑1 (MQ=255) tCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCTGTCCTTCTTCGCCGCGGCCGTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTGGTCCTTTTCCTTgtcgtc > 2:1825461/1‑151 (MQ=255) cacaGGGCTGAAACGCACG‑TGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCct < 1:4652923/151‑1 (MQ=255) aGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCCACGCGCCGGACTCAGGCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCtt > 1:4812817/1‑151 (MQ=255) ggCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTcc < 2:8426419/151‑1 (MQ=255) cagAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCAt < 1:6975254/149‑1 (MQ=255) tGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATg > 2:3790177/1‑151 (MQ=255) gAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGc > 1:10236283/1‑151 (MQ=255) aaaCGCACGA‑GGGC‑GGGGCTTACCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTGGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCATTTCCTTGTCGTCCTCTTCCATGcc < 1:2283691/151‑1 (MQ=255) cGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAg < 1:5619554/151‑1 (MQ=255) | TCGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAGT > NC_008463/5395317‑5395613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |