| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,594,570 | (G)6→5 | coding (1096/1350 nt) | nuoF ← | NADH‑quinone oxidoreductase subunit NuoF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,594,565 | 0 | G | . | 98.3% | 2502.6 / 31.2 | 526 | coding (1101/1350 nt) | nuoF | NADH‑quinone oxidoreductase subunit NuoF |
| Reads supporting (aligned to +/- strand): ref base G (3/0); major base . (243/270); minor base T (7/2); total (253/273) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.44e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 559 total aligned reads displayed.
CTCGACGGCTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAGGGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAGGGGAAACCATGTTGATGCTGTCGTCCACCGCCATGGGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCT > NC_008463/2594415‑2594713 | tCGACGGCTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAgg > 1:1636945/1‑151 (MQ=255) cGACGGCTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAggg > 1:8222616/1‑151 (MQ=255) gACGGCTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAgggg > 2:4860867/1‑151 (MQ=255) gACGGCTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAgggg < 2:4599039/151‑1 (MQ=255) gACGGCTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAgggg < 2:10225337/151‑1 (MQ=255) gCTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGACGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAgggggtgc > 2:6527959/1‑148 (MQ=255) cTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGTCCGAGGAAGTTGCCCAGTTGCTAGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAgggggtgca < 2:2362674/151‑5 (MQ=255) cTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAgggggtgca < 1:4374881/151‑5 (MQ=255) tCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCAc > 1:1832569/1‑151 (MQ=255) ccGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCa < 1:2289792/151‑1 (MQ=255) cGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAg > 2:9366226/1‑151 (MQ=255) ggCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGc > 1:8681079/1‑151 (MQ=255) cgcATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCGGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCg > 2:3560294/1‑151 (MQ=255) cgcATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCg < 1:5173849/151‑1 (MQ=255) cgcATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCg < 1:8079817/151‑1 (MQ=255) cgcATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCg < 2:5413215/151‑1 (MQ=255) gcATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGc > 1:667163/1‑151 (MQ=255) cATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCa < 2:6233087/151‑1 (MQ=255) ggCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGAc > 2:3913882/1‑151 (MQ=255) cAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTcgc > 1:9917098/1‑151 (MQ=255) aGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGc < 2:10691227/151‑1 (MQ=255) gTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCga > 2:5781673/1‑151 (MQ=255) ttGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCgaaga > 1:6934663/1‑151 (MQ=255) tGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCgaagaa > 1:10558410/1‑151 (MQ=255) tGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCgaagaa < 2:10856918/151‑1 (MQ=255) gCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAAc < 1:80240/151‑1 (MQ=255) gggCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCtt < 1:9201585/151‑1 (MQ=255) gggCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCtt < 1:7240574/151‑1 (MQ=255) ggCCGAGGAAGTTGACAAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGGCACGCTCTAGGGCGCGCTGCAGCGTCTCGCTCCACTGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTc < 2:6380454/151‑1 (MQ=255) gCCGAGGAAGGTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTcc < 2:5904532/151‑1 (MQ=255) ccGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCa < 2:6679464/151‑1 (MQ=255) ccGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCa < 1:11013790/151‑1 (MQ=255) gAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGC‑TGGGGGTGCACCAGCCGCGGGACTCGCGGGCGAAGAACTCTTCCTTg > 2:6000980/1‑151 (MQ=255) ggAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGtt < 1:477925/151‑1 (MQ=255) gcaGTTGTCCAGTTGCGTGTGGGTGTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTg < 2:10048782/149‑1 (MQ=255) gAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTg < 1:5081611/151‑1 (MQ=255) aGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTgcg > 1:10432394/1‑151 (MQ=255) gTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTgcgc > 2:199141/1‑151 (MQ=255) gACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCgcagc > 1:1299800/1‑151 (MQ=255) aCCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCgcagca > 2:7137935/1‑151 (MQ=255) cctgTTGCTTGAGGGTCTCGTGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCTCGCTCCTCGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGcagcag < 2:1586200/148‑1 (MQ=255) ccAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGcagcag < 1:3917521/151‑1 (MQ=255) ccAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGcagcag > 1:4266165/1‑151 (MQ=255) cAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAgg < 2:5285076/151‑1 (MQ=255) cAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTCCCATGTTGCGCAGCAgg > 2:10481906/1‑151 (MQ=255) ttGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGATCTCTTCCATGTTGCGAAGCA‑GGGAAACCa < 2:340917/151‑1 (MQ=255) ttGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAgggacacca > 1:5991920/1‑145 (MQ=255) ttGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCa < 1:2755498/151‑1 (MQ=255) ttGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCa < 1:9352325/151‑1 (MQ=255) gggTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGtt < 1:1122841/151‑1 (MQ=255) gggTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGtt < 2:8705936/151‑1 (MQ=255) ggTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTg < 1:1025040/151‑1 (MQ=255) ggTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTg < 1:6314687/151‑1 (MQ=255) gAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTg < 2:4168940/151‑1 (MQ=255) aGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTgt < 2:4341001/151‑1 (MQ=255) aGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTgt > 1:7462578/1‑151 (MQ=255) gTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTgtcg < 2:7637498/151‑1 (MQ=255) gCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTcc > 2:3019921/1‑151 (MQ=255) cGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGACACCATGTTGATGCTGTCGTCCAc > 2:249447/1‑151 (MQ=255) cGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCAc < 1:398215/151‑1 (MQ=255) gggCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCAcc < 1:573046/151‑1 (MQ=255) gggCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCAcc > 1:2633322/1‑151 (MQ=255) gCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGc < 1:4312544/151‑1 (MQ=255) gCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCATg > 1:3504503/1‑151 (MQ=255) cTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCATggc > 1:319796/1‑150 (MQ=255) cTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCATggc > 2:1263392/1‑150 (MQ=255) tCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCATggcca > 1:7738197/1‑148 (MQ=255) ccACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGc < 2:6832348/151‑1 (MQ=255) ccACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGc < 1:3806868/151‑1 (MQ=255) cACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGcc > 2:10965238/1‑151 (MQ=255) cACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGcc < 1:5278771/151‑1 (MQ=255) cGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCgg < 1:8321905/151‑1 (MQ=255) ctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGcc < 2:8113816/151‑1 (MQ=255) ctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGcc > 2:3811886/1‑151 (MQ=255) ctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCAGGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGcc > 2:9912467/1‑151 (MQ=255) ctAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGC‑TGGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGcc > 2:5214483/1‑151 (MQ=255) tAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGccc < 2:6111069/151‑1 (MQ=255) aGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCa < 1:1475791/151‑1 (MQ=255) cgcgcAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCg > 2:8958462/1‑151 (MQ=255) gcgcAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCgg < 2:2628048/151‑1 (MQ=255) cgcAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCggg > 1:9951979/1‑151 (MQ=255) gcagcaGCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGt < 1:361764/151‑1 (MQ=255) cagcagCTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTg > 1:9645967/1‑151 (MQ=255) agcTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGa > 1:851446/1‑151 (MQ=255) gcTTCACGCTGCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGTCTCGCGGGCGAAGAACTCTTGCTTGTTGCGCAGCA‑GGGATACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGAc < 2:7336319/151‑1 (MQ=255) cTTCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGAcc > 1:8771447/1‑151 (MQ=255) ttCACGCTCCACGGGAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCt > 1:10837576/1‑151 (MQ=255) ttCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCt > 2:8001606/1‑151 (MQ=255) ttCACGCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCt > 1:2507721/1‑151 (MQ=255) gCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCg < 1:545163/151‑1 (MQ=255) gCTCCACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCg < 2:9601272/151‑1 (MQ=255) cACGGCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATgc > 1:1212190/1‑151 (MQ=255) gCAGGCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATgccgcc < 2:2776310/151‑1 (MQ=255) gCAGGCCGTCGCGGC‑TGGGGGTGCACAAGACGAAGGACTCGAGGCCGAAGCACTCTACCATGTTGAGAACCA‑GGGAAACCATGTTGTTCCGGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCAGACCTTGGCGAAgccgcc > 2:8402467/1‑151 (MQ=255) ggCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGc < 1:458902/151‑1 (MQ=255) gCCGTCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCg > 2:3121792/1‑151 (MQ=255) tCGCGGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACa < 1:10164044/151‑1 (MQ=255) cgcgGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACAt > 1:2065710/1‑151 (MQ=255) cgGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCt > 1:3226842/1‑151 (MQ=255) cgGCA‑GGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCA‑GGGAAACCATGTTGATGCTGTCGTCCACCGCCAT‑GGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCt > 2:11201543/1‑151 (MQ=255) | CTCGACGGCTCCCGGCGCATGGGCGCAGAAGGTCTTGCCTGGGCCGAGGAAGTTGACCAGTTGCTTGAGGGTCTCGAGGTCGCCGGGCTGGCCTTCGCCACGCTCTAGGGCGCGCAGCAGCTTCACGCTCCACGGCAGGCCGTCGCGGCAGGGGGGTGCACCAGCCGCAGGACTCGCGGGCGAAGAACTCTTCCATGTTGCGCAGCAGGGGAAACCATGTTGATGCTGTCGTCCACCGCCATGGGCCAGGCCGGTGCCCATCCGGGTGCCGACCTTGGCGATGCCGCCGGCGAACATCT > NC_008463/2594415‑2594713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |