New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_008463 3175697 =392 (0.770)499 (1.070) 211/274 0.1 61.8% intergenic (+390/+106) PA14_RS30505/PA14_RS14515 hypothetical protein/hypothetical protein
?NC_008463 = 3177289 259 (0.550)intergenic (‑69/‑218) PA14_RS14525/PA14_RS14530 hypothetical protein/Tn3 family transposase

Only 100 of 662 total aligned reads displayed.

GAGATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_008463/3175859‑3175697
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgcataatgCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCTC  <  NC_008463/3177289‑3177140
                                                                                                                                                                                                                                                                                                                         
GAGATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGG                                                                                                                                                                    <  2:8995088/151‑1
 AGATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGC                                                                                                                                                                   >  2:8604774/1‑151
  GATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCGCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCT                                                                                                                                                                  >  1:8950685/1‑151
   ATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTT                                                                                                                                                                 <  2:4282374/151‑1
     GTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCG                                                                                                                                                               <  1:811452/151‑1
     GTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCGTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCG                                                                                                                                                               <  2:1085437/151‑1
      TTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGC                                                                                                                                                              >  1:9843673/1‑151
      TTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGC                                                                                                                                                              >  1:8682419/1‑151
       TCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCA                                                                                                                                                             >  1:5235690/1‑151
        CTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCAT                                                                                                                                                            >  2:2293568/1‑151
        CTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCAT                                                                                                                                                            >  1:766944/1‑151
               GACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTC                                                                                                                                                     >  1:2710848/1‑151
                ACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCG                                                                                                                                                    <  1:8236747/151‑1
                 CATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGG                                                                                                                                                   <  1:1570292/151‑1
                 CATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGG                                                                                                                                                   >  2:3912814/1‑151
                           TTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTG                                                                                                                                         <  1:3417229/151‑1
                            TGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGA                                                                                                                                        <  2:2428283/151‑1
                             GCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTGGAG                                                                                                                                       >  2:10222862/1‑151
                              CGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGC                                                                                                                                      <  2:1318750/151‑1
                                       AAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGACAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGG                                                                                                                             <  2:7957819/151‑1
                                           ATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGAAAA                                                                                                                         <  2:3137459/151‑1
                                               GGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACG                                                                                                                     >  1:10912137/1‑151
                                                    ACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGC                                                                                                                >  1:8749859/1‑151
                                                       ANCCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCC                                                                                                             >  2:342367/1‑151
                                                       AACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCC                                                                                                             <  1:2804815/151‑1
                                                       AACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCC                                                                                                             <  1:5489783/151‑1
                                                        ACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCG                                                                                                            >  2:7268014/1‑151
                                                           GATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGC                                                                                                         <  2:8329010/151‑1
                                                            ATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATACTGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCG                                                                                                        <  2:4818824/151‑1
                                                            ATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCG                                                                                                        >  2:5250463/1‑151
                                                            ATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCG                                                                                                        <  2:882349/151‑1
                                                                GGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGC                                                                                                    >  1:6692106/1‑151
                                                                 GCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCGGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCG                                                                                                   <  1:593573/151‑1
                                                                    TCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAA                                                                                                >  2:1120581/1‑151
                                                                     CACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAAC                                                                                               <  1:6964309/151‑1
                                                                         GGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAG                                                                                           >  1:9569044/1‑151
                                                                         GGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAG                                                                                           >  2:7735232/1‑151
                                                                          GCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGG                                                                                          <  1:4102210/151‑1
                                                                               AAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGt                                                                                     >  2:10326511/1‑150
                                                                               AAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGATTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGA                                                                                     <  1:4848098/151‑1
                                                                                AAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTCACAGAGGGCCGAT                                                                                    >  1:8407540/1‑151
                                                                                 AGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATT                                                                                   <  2:6517274/151‑1
                                                                                     AGGAAACCCCGGTAGAGCGCTCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGC                                                                               <  2:1893311/151‑1
                                                                                      GGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCG                                                                              <  1:2460983/151‑1
                                                                                         AACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAA                                                                           >  1:4997988/1‑151
                                                                                          ACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTCACATAGGGCCGATTATGCGCAcg                                                                          >  1:6469946/1‑149
                                                                                          ACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTAGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAG                                                                          >  2:2042153/1‑151
                                                                                            CCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCC                                                                        <  1:10754940/151‑1
                                                                                            CCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCC                                                                        <  1:6305650/151‑1
                                                                                             CCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCT                                                                       <  2:6377304/151‑1
                                                                                             CCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCT                                                                       <  2:4448085/151‑1
                                                                                              CGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTG                                                                      <  1:11196330/151‑1
                                                                                                 TAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACC                                                                   >  2:6114092/1‑151
                                                                                                  AGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCC                                                                  <  1:4554988/151‑1
                                                                                                   GAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCT                                                                 >  2:2713737/1‑151
                                                                                                     GCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCT                                                               <  1:3894311/151‑1
                                                                                                          CTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTG                                                          >  1:3720663/1‑151
                                                                                                               GGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCG                                                     <  2:6649398/151‑1
                                                                                                                gtTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTAGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCAGATTATGCGCAAGCCTGACCCTCTCCCGGTACCGC                                                    >  2:6911282/3‑151
                                                                                                                  TTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAG                                                  <  2:709699/151‑1
                                                                                                                    TTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCA                                                >  2:1546188/1‑151
                                                                                                                      TCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATC                                              <  1:1061595/151‑1
                                                                                                                             TCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGA                                       >  1:9955928/1‑151
                                                                                                                              CCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGAT                                      >  1:3277455/1‑151
                                                                                                                                 GGCCGCCTTGACATGCTTAAGGCTTCGCATTATGCTCGGCCTTATGTTGAGCGCCGCCCGGACTATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCAGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGTTCAc                                   <  1:3056749/151‑2
                                                                                                                                   CCGCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGC                                 <  2:2505315/151‑1
                                                                                                                                     GCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGA                               <  1:2212829/151‑1
                                                                                                                                     GCCTGGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATAAAGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGA                               >  2:5506998/1‑151
                                                                                                                                      CCTGGAAATGCTTAAGGCTTCGCATACTGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGAC                              <  1:4430134/151‑1
                                                                                                                                         GGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTCCCGCAGCATCTGATCGATCAAGCGACGCT                           <  1:4295255/151‑1
                                                                                                                                         GGAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCT                           >  2:7469554/1‑151
                                                                                                                                          GAAATGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTACCATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTG                          >  1:7478099/1‑151
                                                                                                                                             gTGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCGGATGATGCGCATGCCTGACCCTCTCCCTGTACCGCAGCTTCTGATCGCTCAAGCGACGCGGTAC                       >  1:7993724/2‑151
                                                                                                                                              TGCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACG                      >  2:10470688/1‑151
                                                                                                                                               GCTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCACGCGACGCTGTACGC                     <  2:5344042/151‑1
                                                                                                                                                CTTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCG                    <  2:11053903/151‑1
                                                                                                                                                 TTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGGTCAAGCGACGCTGTACGCGC                   >  2:5079646/1‑151
                                                                                                                                                 TTAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGC                   <  2:1739258/151‑1
                                                                                                                                                  TAAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCGGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAGCATAGGGCCGTTGATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGTTCAAGCGACGCTGTCCGCGCC                  >  2:6766218/1‑151
                                                                                                                                                   AAGGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCG                 <  2:3966937/151‑1
                                                                                                                                                     cGCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGCCGCTGTACGCGCCGTC               <  2:3710751/150‑1
                                                                                                                                                      GCTTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCT              <  1:7183833/151‑1
                                                                                                                                                        TTCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCG            <  1:10071327/151‑1
                                                                                                                                                         TCGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGC           >  1:10190343/1‑151
                                                                                                                                                          CGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCG          <  2:8145225/151‑1
                                                                                                                                                          CGCATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCG          <  1:1911086/151‑1
                                                                                                                                                            CATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGAT        >  2:6272779/1‑151
                                                                                                                                                            CATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGAT        <  1:1314772/151‑1
                                                                                                                                                             ATAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATC       <  1:9161791/151‑1
                                                                                                                                                              TAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCC      <  2:10781566/151‑1
                                                                                                                                                              TAATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTATCGCGATCC      >  2:2804334/1‑151
                                                                                                                                                               AATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCT     <  1:9426715/151‑1
                                                                                                                                                               AATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCT     >  1:1042112/1‑151
                                                                                                                                                               AATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCT     <  2:9251530/151‑1
                                                                                                                                                                ATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTC    >  2:5719541/1‑151
                                                                                                                                                                ATGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCGGTACGCGCCGTCTCGCGATCCTC    >  2:9741012/1‑151
                                                                                                                                                                 TGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCT   <  1:7837100/151‑1
                                                                                                                                                                 TGCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCT   <  1:18111/151‑1
                                                                                                                                                                  GCTCGGCCTTATGTTGAGCGCCGCCCGGCCAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCTC  <  1:6024242/151‑1
                                                                                                                                                                  GCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCTC  <  2:9386531/151‑1
                                                                                                                                                                                                                                                                                                                         
GAGATGTTCTGGTCGGACATTCGTACGTTGCGGGTGTTGAAGCATCGGGTGGACTAACCGATAAGGCTTCACTGGCTAGAAAGCAAGGAAACCCCGGTAGAGCGATCTCCGGGGTTTTTCGTGGATCCTGGCCGCCTGGAAATGCTTAAGGCTTCGCATAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_008463/3175859‑3175697
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgcataatgCTCGGCCTTATGTTGAGCGCCGCCCGGACAATACGGCGGCTCCGGGCGGCGCGTAACATAGGGCCGATTATGCGCAAGCCTGACCCTCTCCCTGTACCGCAGCATCTGATCGATCAAGCGACGCTGTACGCGCCGTCTCGCGATCCTCTC  <  NC_008463/3177289‑3177140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.