Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084631,763,5340TG25.0% 529.8 / 23.1 326L13R (CTC→CGC) PA14_RS08240RHS repeat protein
Reads supporting (aligned to +/- strand):  ref base T (55/173);  new base G (76/0);  total (149/177)
Fisher's exact test for biased strand distribution p-value = 3.84e-36
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 345 total aligned reads displayed.

CTGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCCTCTA  >  NC_008463/1763384‑1763663
                                                                                                                                                      |                                                                                                                                 
  gTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGcgccctcg                                                                                                                                 <  1:10008455/151‑1 (MQ=33)
   ttCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACACGGACGACCCCCGTGCGCATCCCCCCAGACGGCCCCCGTCTCGGcgccctcgc                                                                                                                                >  2:10494863/1‑151 (MQ=255)
       tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGCCCGTCACCACCCGCTGACAAGGACGACCCCCCTGCGCATCCCCCCGTCCTGCCCCCGGCGCGGCGCCCTCGCCCTg                                                                                                                            >  2:6443228/1‑151 (MQ=11)
       tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGgcgcccgcgcccgg                                                                                                                            >  1:9778030/1‑149 (MQ=18)
       tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTg                                                                                                                            <  1:10466008/151‑1 (MQ=33)
       tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTg                                                                                                                            <  1:4143429/151‑1 (MQ=33)
       tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTg                                                                                                                            <  2:8899821/151‑1 (MQ=33)
       tccCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTGCCCCCGTCTCGGcggcctcgcccgg                                                                                                                            >  1:9439070/1‑149 (MQ=16)
        cccGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTgg                                                                                                                           <  1:9224285/151‑1 (MQ=33)
         ccGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCTTGCGCAGCCCCCCGGTCTTCCCCCGGCTCGGCGCCCGCGCCCGGGc                                                                                                                          >  1:11038508/1‑151 (MQ=11)
            gTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTg                                                                                                                       <  2:1268717/151‑1 (MQ=33)
              gCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTgcg                                                                                                                     <  1:3619835/151‑1 (MQ=33)
                  gTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCTTCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCAGGCCTGCgcccg                                                                                                                 >  2:3950050/1‑150 (MQ=18)
                  gTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccct                                                                                                                 <  1:5841714/151‑1 (MQ=33)
                  gTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccct                                                                                                                 <  1:7587225/151‑1 (MQ=33)
                   tCAGCGAGCCCGGTCGGCTCACCCGCGACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCCCCCGCTGACATGGACGACCCCCATGCGCATCCCCCCAGACTGCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctg                                                                                                                <  2:6607842/151‑1 (MQ=11)
                   tCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctg                                                                                                                <  1:2193558/151‑1 (MQ=33)
                   tCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGGCCGGGGCTGCgccctg                                                                                                                >  1:10016739/1‑151 (MQ=255)
                   tCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctg                                                                                                                <  1:6520689/151‑1 (MQ=18)
                   gcAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctg                                                                                                                <  2:5701188/150‑1 (MQ=18)
                     aGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCAGCCCCCCATACTTCCCCCGTCTCGGGGCCCTCGCCCTGGCGTGCgcccaggg                                                                                                              >  1:7139803/1‑150 (MQ=255)
                      gCGAGCCCGGTCGGATCACCCGCGACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggcc                                                                                                             <  2:4184797/151‑1 (MQ=18)
                       cGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCAGGGCCCCCGCGTTCCCCCGTCTCGGCGCCCGCGCCCTGGGCGGCgccctggccc                                                                                                            >  2:10264824/1‑151 (MQ=11)
                        gAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCgccctggccct                                                                                                           <  1:1357933/151‑1 (MQ=33)
                             cGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCcg                                                                                                      <  2:3414694/151‑1 (MQ=33)
                              ggTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCcgc                                                                                                     <  1:10221913/151‑1 (MQ=33)
                              ggTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCcgc                                                                                                     <  1:10870361/151‑1 (MQ=33)
                               gTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCACCCCAGACTTCCCCCGACTGGTCGCCCTCCCCCATGGGGGCGCCCAGGCCCTGccccgg                                                                                                    >  1:8019498/1‑148 (MQ=11)
                                tCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGGCCGCGCCCGGGGCGGCGCCCGGGCCCGGCCCgcgc                                                                                                   >  1:1152496/1‑151 (MQ=11)
                                 cGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGGCCGGGCGCGGGCCTGCGCGCCGGCCCGGGCCgcgcg                                                                                                  >  1:8415098/1‑150 (MQ=11)
                                 cGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGCCCGGGCCCTGCCCGCGCa                                                                                                  >  1:3672929/1‑151 (MQ=9)
                                 cGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCGCGCGCCCGGGCCTGCGCCCTGGGGCGGCCCgcgcg                                                                                                  >  1:10840265/1‑150 (MQ=11)
                                  ggATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGGCCGGGCCTGCGCCCTGGCCCTGCCCGCGCAg                                                                                                 >  1:5534539/1‑151 (MQ=9)
                                     tCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAggcg                                                                                              <  1:9400323/151‑1 (MQ=31)
                                     tCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGGCTCGGCGCCCTCGGGCAGGCCAGCGCCCTGGCCCGGCCCGCGCCggcg                                                                                              >  1:679909/1‑151 (MQ=11)
                                     tCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCAGACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAggcg                                                                                              <  2:5955702/151‑1 (MQ=14)
                                      cACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGCCCCCCATGCGCAGGCCCCCATCCGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAggcgg                                                                                             >  2:7200515/1‑151 (MQ=255)
                                        cccGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGCCGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGcc                                                                                           <  2:7739177/151‑1 (MQ=14)
                                        cccGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGcc                                                                                           <  1:165636/151‑1 (MQ=31)
                                        cccGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGcc                                                                                           <  1:5308725/151‑1 (MQ=14)
                                         ccGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCg                                                                                          <  1:10959824/151‑1 (MQ=31)
                                          cGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCCTGCGCATCCCCCCATACTTCCCCCGTCTCGGGGCCCACCCCCAGGCCGGCGCCCAGGCCCTGCCCGCGCAGGCGGCCgg                                                                                         >  1:3840403/1‑150 (MQ=11)
                                          cGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGa                                                                                         <  1:9992337/151‑1 (MQ=31)
                                          cGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGa                                                                                         <  1:9911528/151‑1 (MQ=31)
                                            cTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAgc                                                                                       <  2:6741912/151‑1 (MQ=31)
                                              aCCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAgcgc                                                                                     <  2:3178037/151‑1 (MQ=31)
                                               ccAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAgcgcg                                                                                    <  2:403249/151‑1 (MQ=31)
                                                cAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCAGCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGGCCTGGCCTGGGCCCTGGGCCGGCCCGCGCCGGCGGCCGAgcgcgc                                                                                   >  1:3276882/1‑151 (MQ=11)
                                                  gTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCt                                                                                 <  1:210902/151‑1 (MQ=31)
                                                         gCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATGCCCCCATAGGTCCGCCGTCTCGGCGCCCGCGCCCTGGCCGGCGCCCTGGCCCGGCCCGCGCCGGCGGCCGAGCGCGCCTGGggcga                                                                          >  2:9133650/1‑149 (MQ=11)
                                                          ccGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCAGGCGCATCCCCCCGTACGTCCCCCGGCTCGGGGCCCGCGCCCGGGGCGGCGCCCGGGCCCTGCCCGCGCGGGGGGGCGAGCGCGCCgggggggcc                                                                         >  2:11154979/1‑145 (MQ=11)
                                                            gAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacag                                                                       <  2:5285774/151‑1 (MQ=31)
                                                             aGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacagc                                                                      <  1:6192093/151‑1 (MQ=31)
                                                             aGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacagc                                                                      <  1:2549909/151‑1 (MQ=31)
                                                              gggACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGACTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGagctacagct                                                                     <  2:4860184/151‑1 (MQ=14)
                                                                   gCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCTTGCGCCTCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCTGCGGCCTGGCCCTGCCCGCGCCGGGGGCCGAGCGCGCCTGGAGCTACAGCGACAAc                                                                >  2:7554741/1‑151 (MQ=11)
                                                                   gCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGGCTCGGCGCCCGCGCCCAGGCCTGCGCCCGGGCCCTGCCCGCGCAGGCGGCCGAGCGGGCCGGGAGCTACCGCTACAAc                                                                >  2:8528699/1‑151 (MQ=11)
                                                                     aaGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGc                                                              <  1:1733001/151‑1 (MQ=31)
                                                                     aaGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGc                                                              <  1:2686851/151‑1 (MQ=31)
                                                                        aCCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCAGGCCGGCGCCCGTGCCCTGCCCGCGCAGGCGGGCGCGCGCGCCTGGAGCGACCGCTGCAACGcccg                                                           >  1:8683931/1‑150 (MQ=11)
                                                                          cGGCGAGACCGTCACCACCCGCTGACACGGACGACCCCCATGCGCCTCCCCCCATACTTCCCCCGTCTCGGCCCCCTCGCCCAGCGCCGCGCCCGCGCCCGGCCCGCGCAGGCGGCCGAGCGCGCCGCGAGCTACAGCAACAACGCCCACg                                                         >  2:3866551/1‑151 (MQ=11)
                                                                           ggCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCgg                                                        <  2:6206191/151‑1 (MQ=31)
                                                                           ggCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCTGGCCTGCGCCCGGGCCCGGCCCGCGCAGGCGGCCGCGCGCGCCGGGGGCTACCGCGACAACGCCCTCgg                                                        >  1:9528598/1‑151 (MQ=11)
                                                                           ggCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACGTCCCCCGTCTCGGGGCCCGGGCGCTGGCCTGCGCCCTGGCCCGGCCCGCGCCGGCGGCCGAGCGCGCCTGGAGCAAGGGCGACCACGCCCGCgg                                                        >  1:2238879/1‑151 (MQ=11)
                                                                               agaCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCCTACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTg                                                    <  2:7990837/151‑1 (MQ=14)
                                                                                 aCCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGAt                                                  <  2:8153088/151‑1 (MQ=31)
                                                                                  ccGTCACCACCCGCTGACAAGGCCGACCCCCAGGCGCATCCCCCCCTACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCGGCGCCCAGGCCCTGCCCGCGCCGGCGGCCGAGCGCGCCTGGAGCTACAGCAACAACGCCCACGGCCGGATc                                                 >  2:1597721/1‑151 (MQ=11)
                                                                                   cGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCg                                                <  2:10979126/151‑1 (MQ=31)
                                                                                   cGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCAACAACGCCCTCGGCCGGATCg                                                >  2:9311930/1‑151 (MQ=14)
                                                                                   cGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCAGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCAGAGCg                                                >  2:9218190/1‑151 (MQ=9)
                                                                                    gTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGa                                               <  1:5615664/151‑1 (MQ=31)
                                                                                    gTCACCACCCGCTGACAAGGACGACCCCCATGCGCAGCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGa                                               <  2:9727554/151‑1 (MQ=14)
                                                                                     tCACCCCCCGCCGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGACCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAg                                              <  2:7442019/151‑1 (MQ=9)
                                                                                     tCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGGGCCCTCGCCCAGGCCAGCGCCCTGGCCCGGCCCGCGCCGGCGGCCGAGCGCGCCGGGAGCGACAGCTAAAACGCCCGCCGCCAGATCGAg                                              >  1:3434640/1‑151 (MQ=11)
                                                                                     tCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAg                                              <  1:4757261/151‑1 (MQ=31)
                                                                                     tCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCGGGCCTGCGCCCTGGCCCGGCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCGACAGCGACAACGCCCGCGGCCTGGTCGAg                                              >  1:9047330/1‑151 (MQ=11)
                                                                                     tCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGACTCGGCGCCCGCGCCCAGGCCTGCGCCCGGGCCCTCCCCGCGCAGGCGGGCCAGCGCGCCGGGAGCGACAGCGACAACGCCCTCGGCCTGGTagag                                              >  1:10688159/1‑151 (MQ=11)
                                                                                      caccacCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCTGGCCTGCGCCCGGGCCCTGCCCGCGCAGGCGGCCCAGCGCGCCTGGAGCTACACCGACAAAGCCCTCGGCCTGATCGAgc                                             >  1:7321778/1‑151 (MQ=11)
                                                                                       accaccCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAgcg                                            <  1:1827976/151‑1 (MQ=31)
                                                                                          accCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGGGCCAGCGCCCAGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCACGGCCAGATCGAgcgcgc                                         >  1:1538011/1‑151 (MQ=11)
                                                                                           cccGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCAGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCGGGAGCTACAGCTACAACGCCCGCGGCCTGATCGAGCGCGcc                                        >  2:2766674/1‑151 (MQ=9)
                                                                                            ccGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCg                                       <  1:7187287/151‑1 (MQ=31)
                                                                                              gCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCAGGCCTGCGCCCTGGCCCAGCCCGCGCAGGCGGCCGCGCGAGCCAGGACCTAAAGCTACAACGCCCTCGTCCTGATCGAGCTCGCCGAc                                     >  2:1324517/1‑151 (MQ=11)
                                                                                               cTGACAAGGACGACCCCCATGCGCCTCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACg                                    <  2:2451224/151‑1 (MQ=14)
                                                                                                tGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACgg                                   <  1:2423746/151‑1 (MQ=31)
                                                                                                 gACCAGGACGACCCCCATGCGCATCCCCCCATACATCCCCCGTCTCGGCGCCCTCGCCCTGGCCGGCGCCCAGGCCCAGCCCGCGCAGGCCGCCGAGCGCGCCAGGAGCTACAGCTACAACGCCCACGGCCGGATCGAGCGCGCCGACggg                                  >  2:4361272/1‑150 (MQ=11)
                                                                                                 gACAAGGACGACCCCCATGCGCATCCCCCCATCGTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGGGCGCGCCTGGAGCTACAGCTCCAACGCCCTCGGCCTGTTCGAGCGCGCCGACGGt                                  >  1:6342647/1‑151 (MQ=255)
                                                                                                   cAAGGACGACCCCCATGCGCATCCCCCCCAACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTcc                                <  2:3659685/151‑1 (MQ=14)
                                                                                                   cAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTcc                                <  1:9356958/151‑1 (MQ=31)
                                                                                                   cAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCAGGCCAGCGCCCTGGCCCGGCCCGCGCCCGCGGCCGGGCGCCCCAGGCGCGACAGCGAAAACCCCCACGGCCTGATAGAGCGCGCCGACCGTcc                                >  1:4909201/1‑151 (MQ=11)
                                                                                                    aaGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCTGGCCTGAGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCACGGCCTGATCGAGCGCGCCGACGGTCcg                               >  2:9596834/1‑151 (MQ=9)
                                                                                                      ggACGACCCCCCTGCGCATCCCCCCATACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCcgcg                             <  1:8989338/151‑1 (MQ=14)
                                                                                                      ggACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCcgcg                             <  2:6923498/151‑1 (MQ=31)
                                                                                                          gacCCCCCTGCGCATCCCCCCAAACGTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGCGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCAcc                         <  2:1828949/151‑1 (MQ=9)
                                                                                                          gacCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCAcc                         <  1:4608417/151‑1 (MQ=31)
                                                                                                          gacCCCCATGCGCAGCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCAcc                         <  2:7380303/151‑1 (MQ=14)
                                                                                                           acCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCGCGCCCGTGCCTGCCCCCAGGCCCAGCCCGCGCCGGCGGCCCAGCGCGCCGGGAGCGACAGCCACAACGCCCACCGCCAGATCGAGCGCGCCGACCGGCCGCGCACCg                        >  1:4414870/1‑151 (MQ=11)
                                                                                                           acCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCACGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCg                        <  2:10496052/151‑1 (MQ=14)
                                                                                                             ccccATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCAGGCCCAGCCCGCGCAGGCGGCCCAGCCCGCCTCGAGCTACAGCAACAACGCCCTCGGGCGGTTCGAGCGCGCCGACCGGCCGCGCACCGAt                      >  2:1756653/1‑151 (MQ=11)
                                                                                                             ccccATGCGCAGCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGAt                      <  1:4291315/151‑1 (MQ=11)
                                                                                                                                                      |                                                                                                                                 
CTGTTCCTCCCGGTGCAGGTCAGCGAGCCCGGTCGGATCACCCGCTACCAGTACGACGCCGAGGGACGCAAGACCGGCGAGACCGTCACCACCCGCTGACAAGGACGACCCCCATGCGCATCCCCCCATACTTCCCCCGTCTCGGCGCCCTCGCCCTGGCCTGCGCCCTGGCCCTGCCCGCGCAGGCGGCCGAGCGCGCCTGGAGCTACAGCTACAACGCCCTCGGCCTGATCGAGCGCGCCGACGGTCCGCGCACCGATGTGCAGGACGTCACCCTCTA  >  NC_008463/1763384‑1763663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑