Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084635,541,2420TC68.6% 85.9 / inf 294intergenic (‑50/+493)PA14_RS25375/msrQ16S ribosomal RNA/protein‑methionine‑sulfoxide reductase heme‑binding subunit MsrQ
Reads supporting (aligned to +/- strand):  ref base T (43/49);  new base C (86/115);  total (130/164)
Fisher's exact test for biased strand distribution p-value = 5.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 300 total aligned reads displayed.

CGCCGCTGAATCCAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGCTTGATTCG  >  NC_008463/5541092‑5541352
                                                                                                                                                      |                                                                                                              
    gcTGAATCCAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATtctc                                                                                                            >  1:10490277/1‑151 (MQ=31)
    gcTGAATCCAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATtctc                                                                                                            >  2:5061681/1‑151 (MQ=31)
     cTGAATCCAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTctct                                                                                                           <  2:4206734/151‑1 (MQ=31)
       gAATCCAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTa                                                                                                         <  2:4550801/151‑1 (MQ=14)
        aaTCCAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTaa                                                                                                        <  1:5590294/151‑1 (MQ=31)
         aTCCAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTaaa                                                                                                       <  1:6430953/151‑1 (MQ=14)
          tCCAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTaaaa                                                                                                      >  1:11192206/1‑151 (MQ=14)
           ccAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTATGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGATAACCCTAAACTTGGCTCAGCCATCGCACTCTCTTaaaaa                                                                                                     >  1:3588503/1‑151 (MQ=9)
           ccAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTaaaaa                                                                                                     >  2:6265799/1‑151 (MQ=31)
           ccAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTaaaaa                                                                                                     <  1:6631224/151‑1 (MQ=31)
           ccAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTaaaaa                                                                                                     >  1:6280320/1‑151 (MQ=14)
            cAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAag                                                                                                    <  1:4678509/151‑1 (MQ=31)
              ggAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAagag                                                                                                  >  2:6701787/1‑151 (MQ=31)
              ggAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAagag                                                                                                  <  1:3960613/151‑1 (MQ=31)
              ggAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAagag                                                                                                  >  1:11176447/1‑151 (MQ=14)
               gAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAgaga                                                                                                 >  1:1084083/1‑151 (MQ=14)
                aGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGAt                                                                                                <  2:8992122/151‑1 (MQ=14)
                 gCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATa                                                                                               <  1:9898139/151‑1 (MQ=31)
                 gCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATa                                                                                               >  2:2066944/1‑151 (MQ=14)
                 gCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATa                                                                                               <  2:514839/151‑1 (MQ=14)
                  cAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATaa                                                                                              <  2:3449547/151‑1 (MQ=14)
                   aaGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATaaa                                                                                             <  2:1472420/151‑1 (MQ=14)
                   aaGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTATGAGAAAACCCAAAAATTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATaaa                                                                                             >  2:9625299/1‑151 (MQ=9)
                    aGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATaaaa                                                                                            <  1:427138/151‑1 (MQ=14)
                     gCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAAc                                                                                           <  1:9704997/151‑1 (MQ=31)
                      cTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAAct                                                                                          <  2:7212669/151‑1 (MQ=14)
                       tCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAActc                                                                                         <  1:3410667/151‑1 (MQ=14)
                       tCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAActc                                                                                         <  1:2217921/151‑1 (MQ=14)
                         ccTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACtctc                                                                                       <  2:1152775/151‑1 (MQ=14)
                          cTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCg                                                                                      <  2:9902771/151‑1 (MQ=31)
                           ttCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACtctcta                                                                                     >  2:7439122/1‑149 (MQ=14)
                           ttCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGa                                                                                     >  1:2681544/1‑151 (MQ=14)
                             cATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAAt                                                                                   <  1:889008/151‑1 (MQ=31)
                             cATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAAt                                                                                   <  2:3362415/151‑1 (MQ=14)
                               tCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTc                                                                                 <  1:7083955/151‑1 (MQ=14)
                               tCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTc                                                                                 <  1:1513655/151‑1 (MQ=14)
                                ccGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCa                                                                                >  2:7756138/1‑151 (MQ=14)
                                ccGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCa                                                                                <  1:4182708/151‑1 (MQ=14)
                                  gCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACg                                                                              >  2:6508370/1‑151 (MQ=31)
                                  gCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACg                                                                              <  1:4389729/151‑1 (MQ=14)
                                     cGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAgt                                                                           >  2:7108992/1‑151 (MQ=14)
                                       aCTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAgtgt                                                                         >  2:2987097/1‑151 (MQ=31)
                                       aCTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAgtgt                                                                         <  1:3778892/151‑1 (MQ=14)
                                       aCTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAgtgt                                                                         <  1:3114499/151‑1 (MQ=14)
                                        cTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGtt                                                                        >  1:4966979/1‑151 (MQ=14)
                                         ttGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTa                                                                       >  1:5281965/1‑151 (MQ=31)
                                         ttGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTa                                                                       <  2:235413/151‑1 (MQ=14)
                                              tgtgTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGc                                                                  <  2:6170121/151‑1 (MQ=31)
                                              tgtgTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGc                                                                  <  1:7911827/151‑1 (MQ=14)
                                                tgtTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGt                                                                <  1:5369253/151‑1 (MQ=31)
                                                tgtTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGt                                                                <  1:5971158/151‑1 (MQ=14)
                                                 gtTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGtt                                                               <  1:6561437/151‑1 (MQ=31)
                                                 gtTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGtt                                                               <  1:2338106/151‑1 (MQ=14)
                                                  ttAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTg                                                              <  1:464493/151‑1 (MQ=31)
                                                   tAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGc                                                             >  2:9294067/1‑151 (MQ=31)
                                                   tAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGc                                                             >  2:9430181/1‑151 (MQ=14)
                                                     ggCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTg                                                           <  1:188421/151‑1 (MQ=14)
                                                        cTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATa                                                        >  1:9493741/1‑151 (MQ=14)
                                                        cTGCCGACAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATa                                                        <  2:4737342/151‑1 (MQ=14)
                                                            cgccAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCt                                                    <  1:1806824/151‑1 (MQ=14)
                                                              ccAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTg                                                  <  1:4807803/151‑1 (MQ=14)
                                                                   gTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATc                                             >  2:8494283/1‑151 (MQ=31)
                                                                   gTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATc                                             >  2:7719590/1‑151 (MQ=14)
                                                                      cAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCAcc                                          >  2:10181126/1‑151 (MQ=14)
                                                                      cAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCAcc                                          <  1:2096520/151‑1 (MQ=14)
                                                                       aaTCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCa                                         <  1:9218853/151‑1 (MQ=31)
                                                                        aTCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAg                                        <  2:8039172/151‑1 (MQ=31)
                                                                        aTCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAg                                        >  1:25014/1‑151 (MQ=14)
                                                                        aTCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAg                                        >  2:218120/1‑151 (MQ=14)
                                                                         tCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGt                                       <  1:7629739/151‑1 (MQ=14)
                                                                           tGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCt                                     >  1:5939496/1‑151 (MQ=31)
                                                                            gAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCtt                                    >  1:3018680/1‑151 (MQ=31)
                                                                              gCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTAc                                  <  1:7342478/151‑1 (MQ=14)
                                                                                 aTGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATc                               >  1:2908711/1‑151 (MQ=31)
                                                                                   gATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATcac                             <  2:4773389/151‑1 (MQ=31)
                                                                                   gATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATcac                             >  1:4033522/1‑151 (MQ=14)
                                                                                    aTCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATcaca                            <  2:2245528/151‑1 (MQ=31)
                                                                                     tCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACaa                           >  2:10425425/1‑151 (MQ=31)
                                                                                      cAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAg                          >  1:8463322/1‑151 (MQ=14)
                                                                                      cAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAg                          <  1:486538/151‑1 (MQ=14)
                                                                                        aaCTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCa                        <  1:8215998/151‑1 (MQ=14)
                                                                                        aaCTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCa                        >  2:67754/1‑151 (MQ=14)
                                                                                           tctTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCAccc                     >  2:2718868/1‑151 (MQ=31)
                                                                                           tctTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCAccc                     <  2:6998712/151‑1 (MQ=31)
                                                                                           tctTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCAccc                     <  2:10634008/151‑1 (MQ=14)
                                                                                              tCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCcaca                  <  1:328140/151‑1 (MQ=14)
                                                                                               cAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCacac                 >  1:6961887/1‑151 (MQ=14)
                                                                                               cAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACGTGGCTCAGCAATCTCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTTATAATCTTGCGATCACCAGTCTTACATCACAATCACCCacac                 <  2:8716999/151‑1 (MQ=255)
                                                                                                 gTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGa               >  1:10384571/1‑151 (MQ=14)
                                                                                                   tCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAAt             >  2:5245262/1‑151 (MQ=31)
                                                                                                   tCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAAt             >  2:11140457/1‑151 (MQ=14)
                                                                                                    cAATACTGCTCGGGTTTTGAGAAAACCCTTAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAAtt            <  1:1595224/151‑1 (MQ=14)
                                                                                                      aTACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGc          >  1:9076676/1‑151 (MQ=14)
                                                                                                      aTACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGc          >  1:8311400/1‑151 (MQ=14)
                                                                                                        aCTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGCtt        >  2:1997731/1‑151 (MQ=31)
                                                                                                        aCTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGCtt        <  1:1239175/151‑1 (MQ=14)
                                                                                                        aCTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGCtt        >  1:10151033/1‑151 (MQ=14)
                                                                                                          tGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGCTTGa      >  1:10718671/1‑151 (MQ=14)
                                                                                                           gCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCACTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGCTTGAt     <  2:5718252/151‑1 (MQ=14)
                                                                                                            cTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGCTTGAtt    >  1:6193587/1‑151 (MQ=31)
                                                                                                                                                      |                                                                                                              
CGCCGCTGAATCCAGGAGCAAGCTCCCTTCATCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAGTTCAATACTGCTCGGGTTTTGAGAAAACCCTAAACTTGGCTCAGCAATCGCATTCTCTTAAAAAGAGATAAAACTCTCGAATTCACGAGTGTTACTTGCGTTGCTGATAATCTTGCGATCACCAGTCTTACATCACAAGCACCCACACGAATTGCTTGATTCG  >  NC_008463/5541092‑5541352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑