| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 3,426,133 | Δ1 bp | intergenic (+104/+138) | mexY → / ← PA14_RS15615 | multidrug efflux RND transporter permease subunit MexY/YjiK family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 3,426,131 | 0 | C | . | 99.6% | 2160.0 / 1.9 | 442 | intergenic (+102/+140) | mexY/PA14_RS15615 | multidrug efflux RND transporter permease subunit MexY/YjiK family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base . (233/205); minor base G (1/1); total (235/207) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 457 total aligned reads displayed.
GCGCCGCGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTCCCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTC > NC_008463/3425982‑3426276 | gccgcGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTccg > 1:1082613/1‑149 (MQ=255) gcgcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTccggcc < 1:8977251/150‑5 (MQ=255) gcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCaa > 1:585433/1‑150 (MQ=255) gcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCaa > 2:5547162/1‑150 (MQ=255) ccGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACgg > 2:5150261/1‑150 (MQ=255) ccGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACgg > 1:6843903/1‑150 (MQ=255) ggCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGcc < 1:9063695/150‑1 (MQ=255) gCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGccc < 2:4405736/150‑1 (MQ=255) cACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGcccc < 1:1869696/150‑1 (MQ=255) aCCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCg > 2:3929378/1‑150 (MQ=255) ccTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGa > 2:6632595/1‑150 (MQ=255) cTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGACACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGAc < 2:1601989/150‑1 (MQ=255) cGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCt < 2:3975706/150‑1 (MQ=255) ccGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCgg > 1:7339959/1‑150 (MQ=255) cGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCggg < 1:10745199/150‑1 (MQ=255) ggATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCgggg > 1:6114980/1‑150 (MQ=255) ggATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCgggg > 1:7264025/1‑150 (MQ=255) gATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGc > 2:828940/1‑150 (MQ=255) gATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGAACGGT‑CCGGCCAACGGCCCCGACCTGCGGGGc > 2:2477685/1‑150 (MQ=255) ccgccgGAGCAAGCCTGATGCCCCTAGCGACACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTGCGGGGCAAGc < 2:7971324/150‑1 (MQ=255) ccGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCCCCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGc < 1:8586708/150‑1 (MQ=255) cGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCt < 1:9414250/150‑1 (MQ=255) gACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTg > 1:8907173/1‑150 (MQ=255) aCGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTgg < 1:5735558/150‑1 (MQ=255) cGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCCAGCTGga > 2:6069726/1‑150 (MQ=255) cGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGga > 1:8830005/1‑150 (MQ=255) ggAGCAAGCCTGATGCCCCTAGCGAAACTCTCTCTCCCCACCCTGGCAATGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCGAACGGCGCCGACCTTCGGGGCAAGCTggtc > 2:7187191/1‑148 (MQ=255) aGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGgacga > 2:3432029/1‑150 (MQ=255) aGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTgg > 1:391683/1‑150 (MQ=255) tGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGAACGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAc < 1:1461007/150‑1 (MQ=255) tGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagc > 1:8322958/1‑150 (MQ=255) gCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagca > 1:2934314/1‑150 (MQ=255) ccccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCGTCGGGGCAAGCTGGACGACTGGCAAcagcag > 1:3569888/1‑150 (MQ=255) cccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGt < 2:6923898/150‑1 (MQ=255) ccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGtt > 2:620283/1‑150 (MQ=255) cTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTc > 1:5669702/1‑150 (MQ=255) cTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTc > 1:11098274/1‑150 (MQ=255) cTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTc > 2:1770400/1‑150 (MQ=255) gCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCAcc < 2:6840076/150‑1 (MQ=255) gCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCAcc > 1:7659442/1‑150 (MQ=255) cGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCg > 1:8094409/1‑150 (MQ=255) cGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCg > 1:7611483/1‑150 (MQ=255) gAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGa < 1:5476498/150‑1 (MQ=255) gAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGa > 1:2806422/1‑150 (MQ=255) aCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAccc < 2:9129914/150‑1 (MQ=255) ctcGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgct < 2:5854399/150‑1 (MQ=255) ctcGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgct > 2:9425032/1‑150 (MQ=255) cGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgctgc > 1:2178344/1‑150 (MQ=255) ccACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGAc > 2:3631110/1‑150 (MQ=255) aCCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAg > 1:2586801/1‑150 (MQ=255) ccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgat < 1:5278713/150‑1 (MQ=255) ccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgat > 2:3109336/1‑150 (MQ=255) cTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgatg > 1:2736755/1‑150 (MQ=255) gCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATc < 1:6310872/150‑1 (MQ=255) gCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATc < 1:9818502/150‑1 (MQ=255) cACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCg < 1:10223783/150‑1 (MQ=255) gtgCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTa < 1:1944867/150‑1 (MQ=255) tgCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAc > 2:9736856/1‑150 (MQ=255) tgCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAc > 1:4704628/1‑150 (MQ=255) tgCGTCGGGCTGCTCGGCGCCAGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAATCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAc > 2:270412/1‑150 (MQ=255) tgctCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCG‑TACCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGGTCGGCTTCGCGCCGgcgc > 2:11130433/1‑150 (MQ=255) gctCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCt > 2:1417027/1‑150 (MQ=255) gctCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCt > 1:4354128/1‑150 (MQ=255) gctCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCt > 1:4849006/1‑150 (MQ=255) ctCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTa < 2:10688375/150‑1 (MQ=255) gcgcCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCg > 2:4892637/1‑150 (MQ=255) gcCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGgc > 2:7688936/1‑150 (MQ=255) ccTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGgcg > 1:1140464/1‑150 (MQ=255) cccACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCa < 2:5312571/150‑1 (MQ=255) ccACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCaa < 1:1711407/150‑1 (MQ=255) cACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAg < 1:620283/150‑1 (MQ=255) cGACGCCTCGGCCGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCCAGCCt > 1:1055648/1‑150 (MQ=255) cGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCt < 2:8923318/150‑1 (MQ=255) cGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCt > 1:10375113/1‑150 (MQ=255) aCGCCTCGGCAGCCGCGCGCGGCCCCGATCGGT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGa < 2:10508476/150‑1 (MQ=255) aCGCCTCGGCAGCCGCGCGCGGCCCCGATCGGT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGa < 1:5924472/150‑1 (MQ=255) cGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGaa < 1:10955358/150‑1 (MQ=255) gCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCACCAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAAt > 2:2142119/1‑150 (MQ=255) ccTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCACCGGCCCCGACCTTAGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGAGGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAAtt < 2:4351916/150‑1 (MQ=255) ccTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAAtt < 2:8703758/150‑1 (MQ=255) ccTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAAtt < 2:10309576/150‑1 (MQ=255) cTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTc < 2:3058131/150‑1 (MQ=255) tCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTcc < 2:3522043/150‑1 (MQ=255) ggCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCACCAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCACGCCTGAATTccgc < 1:9583179/150‑1 (MQ=255) ggCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTccgc < 2:8459003/150‑1 (MQ=255) gCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTccgcc > 1:2394545/1‑150 (MQ=255) gCAGCCGCGCGCGGCCCCGATCGGT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTccgcc < 1:668920/150‑1 (MQ=255) cAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTccgccg > 1:10028788/1‑150 (MQ=255) aGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGt < 2:10937411/150‑1 (MQ=255) aGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCAGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATACCGCCGt > 1:3196637/1‑150 (MQ=255) ccGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTcc < 2:2815698/150‑1 (MQ=255) gcgcgcgGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCtt > 2:5049303/1‑150 (MQ=255) cgcgGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCATTTc < 1:3350061/150‑1 (MQ=255) gcgGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTcc > 1:161025/1‑150 (MQ=255) ccccGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGcc < 2:7361844/150‑1 (MQ=255) cccGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGccc < 1:9535413/150‑1 (MQ=255) cGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTa < 1:5142791/150‑1 (MQ=255) cGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTa > 2:4815044/1‑150 (MQ=255) gATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAg > 1:9321738/1‑150 (MQ=255) aTCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGt < 2:4564095/150‑1 (MQ=255) | GCGCCGCGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTCCCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTC > NC_008463/3425982‑3426276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |