| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,028,119 | Δ1 bp | intergenic (‑41/+96) | PA14_RS22975 ← / ← PA14_RS22980 | Nramp family divalent metal transporter/ribbon‑helix‑helix domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,028,117 | 0 | C | . | 99.2% | 2423.8 / 10.8 | 498 | intergenic (‑39/+98) | PA14_RS22975/PA14_RS22980 | Nramp family divalent metal transporter/ribbon‑helix‑helix domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (220/274); minor base G (0/4); total (220/278) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
Only 100 of 521 total aligned reads displayed.
GATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGCCCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCGGGTGGGTTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTCG > NC_008463/5027968‑5028263 | tGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccg > 1:3832875/1‑149 (MQ=255) gCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccgtg < 1:9567193/150‑4 (MQ=255) gCGGTGGCCCAGTTGCCGGGGTCCATGGAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccgtg < 1:5075878/150‑4 (MQ=255) gTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCgtggtg < 1:6486157/150‑1 (MQ=255) gTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCgtggtg < 1:4796651/150‑1 (MQ=255) tGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGACCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGtggtgg < 2:10768516/150‑1 (MQ=255) ggCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTggg < 2:9356834/150‑1 (MQ=255) gCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGc < 2:6545696/150‑1 (MQ=255) ccAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAg < 2:2987040/150‑1 (MQ=255) gTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGa < 2:2741770/150‑1 (MQ=255) tGCCGGGGGCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGt < 2:2366271/150‑1 (MQ=255) gCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTa < 2:760233/150‑1 (MQ=255) ccGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTAt < 2:3456167/150‑1 (MQ=255) cGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTAtt > 2:5617017/1‑150 (MQ=255) ggggTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTAttt < 1:2362318/150‑1 (MQ=255) gTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCAc < 2:245592/150‑1 (MQ=255) tCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACg > 1:9419038/1‑150 (MQ=255) ccATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGa < 1:2543910/150‑1 (MQ=255) ccATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGa < 1:3199704/150‑1 (MQ=255) cATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAg < 2:1105262/150‑1 (MQ=255) cATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAg > 2:10495846/1‑150 (MQ=255) cATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAg < 1:1399249/150‑1 (MQ=255) tGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGc < 2:1862490/150‑1 (MQ=255) gttgCCGACCGAGACCAGCAGGCCGGGGCCGACGAAGAGCGCCAGCTTGCGCATCGGCGAGGCGTCGGACGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCg < 1:4402278/147‑1 (MQ=255) gTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCg < 2:9774531/150‑1 (MQ=255) tAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGa < 2:223406/150‑1 (MQ=255) ccgaccgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGc > 1:2972918/1‑150 (MQ=255) ccgaccgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGc < 1:6158593/150‑1 (MQ=255) accgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCgg > 2:5208664/1‑150 (MQ=255) accgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCgg > 1:4850114/1‑150 (MQ=255) ccgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGa > 2:8266698/1‑150 (MQ=255) ccgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGa > 2:6031053/1‑150 (MQ=255) ccgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGa > 2:7761328/1‑150 (MQ=255) cgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGAt < 1:1886659/150‑1 (MQ=255) gagaCCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATc > 1:8790625/1‑150 (MQ=255) agaCCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCg > 2:5761742/1‑150 (MQ=255) agaCCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCg > 2:4397782/1‑150 (MQ=255) aCCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCggg < 2:736633/150‑1 (MQ=255) ccAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCgggg < 2:6930968/150‑1 (MQ=255) agcagGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGggag < 2:2579861/150‑1 (MQ=255) agcagGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGACGCGACGCCGGATCGGggag < 1:1155223/150‑1 (MQ=255) gcagGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGggagg < 1:10425316/150‑1 (MQ=255) cagGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGggagga < 1:9986833/150‑1 (MQ=255) agGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCCGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGaa > 1:8055394/1‑150 (MQ=255) ggCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAg > 2:412923/1‑150 (MQ=255) ggCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAg < 2:5042204/150‑1 (MQ=255) ggCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGG‑GGGCCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGTAg < 2:10082228/150‑1 (MQ=255) ccGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTg < 1:10637011/150‑1 (MQ=255) ccGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTg < 1:6933863/150‑1 (MQ=255) ggggCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGACGTGCg > 2:4048844/1‑150 (MQ=255) gggCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGa > 1:9502989/1‑150 (MQ=255) ggCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGAc < 2:1697827/150‑1 (MQ=255) gCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGAcc > 1:7335642/1‑150 (MQ=255) cgacgaACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAg > 2:5431928/1‑150 (MQ=255) gacgaACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGc < 1:4647597/150‑1 (MQ=255) aaCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTaa < 1:8259227/150‑1 (MQ=255) aCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACTGCGCGGTGG‑CCGTGTTGGGCAGGGTGTATTTCACGAGGCGACGCCGGATCGGGGAGGATGTGCGACCAGCCTaaa < 1:7663844/150‑1 (MQ=255) aCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTaaa > 1:5896311/1‑150 (MQ=255) aCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTaaa < 1:672892/150‑1 (MQ=255) gcCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGttt < 1:9303842/150‑1 (MQ=255) ccAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGGGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGACGTGCGACCAGCCTaatctgttc > 2:284240/1‑143 (MQ=255) ttGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCAcccc < 1:1690299/150‑1 (MQ=255) tGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCg > 1:6368193/1‑150 (MQ=255) cAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcg < 1:10036645/150‑4 (MQ=255) cAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcg > 2:1438546/1‑147 (MQ=255) aGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgc < 1:5484756/150‑5 (MQ=255) ggcgAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgcgtc < 1:2120111/150‑8 (MQ=255) gTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctcc > 2:3222788/1‑150 (MQ=255) tCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctccc < 2:8073129/150‑1 (MQ=255) ccggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCa > 2:3768520/1‑150 (MQ=255) gcACCGCCCCGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGCGTAGTTCACGAGGCGACGCCGGATCGGGGAGGACGTGCGACCAGCCTAAACGTGTCACCCCGGGCGCG‑TCTTCCCTCCCCTCAGGc > 1:8581511/1‑150 (MQ=255) gcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGc > 2:9265977/1‑150 (MQ=255) ccGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTg < 1:11033620/150‑1 (MQ=255) gCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTggg > 2:3300970/1‑150 (MQ=255) gCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTggg < 1:8417881/150‑1 (MQ=255) gCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGgcgcgc > 1:7824512/1‑150 (MQ=255) cTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAACCGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCt < 1:5422816/150‑1 (MQ=255) cTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCt < 2:3083118/150‑1 (MQ=255) gtgGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTgg > 2:5387597/1‑150 (MQ=255) gtgGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTgg < 2:1154902/150‑1 (MQ=255) tgGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGc < 2:9623960/150‑1 (MQ=255) tGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGAc < 1:1564558/150‑1 (MQ=255) gACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGAcc < 2:6315502/150‑1 (MQ=255) cgccgAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAgg > 2:4477771/1‑150 (MQ=255) gccgAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGc > 2:8540105/1‑150 (MQ=255) ccgAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCt > 1:3389288/1‑150 (MQ=255) gAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCa < 1:3614067/150‑1 (MQ=255) aGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAg < 1:7568683/150‑1 (MQ=255) aGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAg > 1:10215813/1‑150 (MQ=255) gggACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGc < 1:1086253/150‑1 (MQ=255) gggACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGc > 2:4724946/1‑150 (MQ=255) aCGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGAc > 1:4094280/1‑150 (MQ=255) aCGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGAc < 1:5163878/150‑1 (MQ=255) aCGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGAc > 2:10699513/1‑150 (MQ=255) gcgGTGG‑CCTTGGTGGGCAGGGAGTATTTCCCGAGGCGCCGACGGATCGGGGTGGAAGTTCGACCAGCCTATACGTTTCACCCC‑GGTCGCGTCTTCCCTCGCCTCAGGCCTGGGCGCTCTGGCCGTCCAGGCTCAGCTCGTCGACCTtct < 2:7097985/150‑1 (MQ=255) gcgGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTtct < 2:885206/150‑1 (MQ=255) gcgGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTtct < 2:2308905/150‑1 (MQ=255) cgGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTtctc < 1:5578962/150‑1 (MQ=255) ggTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTcg < 2:6838963/150‑1 (MQ=255) ggTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTcg < 2:3843576/150‑1 (MQ=255) | GATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGCCCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCGGGTGGGTTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTCG > NC_008463/5027968‑5028263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |