Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 867,378 | 0 | A | C | 23.2% | 746.0 / 24.7 | 387 | L390R (CTG→CGG) | PA14_RS04080 | MFS transporter |
Reads supporting (aligned to +/- strand): ref base A (232/39); new base C (25/57); total (257/130) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.03e-21 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 393 total aligned reads displayed.
CTCTATCCGTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTGGCGGCGGCGACGTTGCT > NC_008463/867229‑867526 | ctctATCCGTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCa > 1:1356695/1‑150 (MQ=255) ctATCCGTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAgg > 1:10134259/1‑150 (MQ=255) ctATCCGTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAgg > 1:2267999/1‑150 (MQ=255) aTCCGTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGgcg > 2:4856249/1‑150 (MQ=255) tCCGTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTTCTGAACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGgcgc > 1:7879024/1‑150 (MQ=255) tCCGTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGgcgc < 1:7029931/150‑1 (MQ=255) ccGTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGgcgcg > 2:7896382/1‑150 (MQ=255) gTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGcgcgcg < 1:6153693/150‑1 (MQ=255) tCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGcga < 2:9757237/150‑1 (MQ=255) tCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCCCGcga > 2:5750968/1‑150 (MQ=255) gCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGcgacg > 1:461777/1‑150 (MQ=255) ccGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGacgacg > 1:5410311/1‑150 (MQ=255) cGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACgg > 1:11056835/1‑150 (MQ=255) gCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGGCGCGCCAGGCGCGCGACGACgggg > 2:4182005/1‑150 (MQ=255) tCCGTCGACGATCGTCTGGTCCTACCTGGATTTCGCCCATCAGCACCTGGACGTGCTCCCCGAGGCCTGGCGGCTGGACGGCCCTGCGCCTGGCGGGGGGTAGCACGCTGGGGTCCGCGGCGGCGCGCCCGGCCCGCGACGACGGGGagc < 2:2390098/150‑1 (MQ=255) tCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGagc > 1:7577292/1‑150 (MQ=255) ccGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGagca > 1:7390604/1‑150 (MQ=255) cGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCCGGCGCGCGACGACGGGGagcag > 2:1557730/1‑150 (MQ=255) gTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGagcagc > 2:1145542/1‑150 (MQ=255) tCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGAAGGGGAGCAgcg > 1:406169/1‑150 (MQ=255) aTCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGAc > 2:4316906/1‑150 (MQ=255) aTCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGAc > 2:11046469/1‑150 (MQ=255) tCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCTCCAGAcc > 1:5018104/1‑150 (MQ=255) gTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGa > 2:8077373/1‑150 (MQ=255) ctggTGCTACGTGTATTTCTGCCCGCAGCACCTGGACCTGCTGCACGAGGCGTGTCGGCTGGACGGCCCTGCGCCTGGGGGGGGGTCGGACGGTGGCGTCAGCGTCGTCGCGCCGGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGt < 2:399151/148‑1 (MQ=255) ccggTGCTCCCTGGATTACGCCCCGCAGCACCGGCACCTGCTCCACTCGGCCTGAGGGCGGGCCGGCCCTGCGCCGGGCGCGGGTTCGCACGCTGGCGTCCGCGCCGTCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGt < 2:699963/148‑1 (MQ=255) cAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGt > 1:10504290/1‑150 (MQ=255) gTGCTTCGTGGTTTTCGGCCAGCCCCACGGGGCCCGGCTCCACGCTGCCTGTGGGGGGGACGGCCCTGCGCGTGGCGCGGGGTCGGCGGCGGGCGTCAGCGTCGCCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACg < 2:3189785/150‑1 (MQ=255) tGCTACCTGTATTTCTGCCAGCACCACCTGGCCCTGCTGCACTTTGCCTGTCGGCGGGAGGGCCCTGCGCGTGGCGCGGGGTTGGACGGGGGCGTCAGGGTGGTCGCGCCGGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACgg < 2:543740/150‑1 (MQ=255) tGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGTCCGAGTACgg > 2:6627948/1‑150 (MQ=255) tGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACgg > 2:4438676/1‑150 (MQ=255) tGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACgg > 2:338882/1‑150 (MQ=255) gCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCAGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCCGCGCCAGACCGAGTACGGc > 2:6672716/1‑150 (MQ=255) catACCGGGATTCCGGCCCGCCGCCCGGGGACCGGCGGCCGGAGGCGTGTCGGCGGGACGGCCCTGCGCCGGCCGGGGGTTAGGCCGCGGGCGTCCGCGTCGCCCCGCCTGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGc < 2:6088086/148‑1 (MQ=255) cTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCg > 1:642304/1‑150 (MQ=255) aCCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGAAGGGGAGCAGCGCCAGGCCGTGTACGGCgtg > 1:1199143/1‑148 (MQ=255) ccTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAgg > 2:7939620/1‑150 (MQ=255) cTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGTCCGAGTACGGCGCggg > 2:6478048/1‑150 (MQ=255) gATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCCGACCGAGTACGGCGAGGGCCg > 2:4761502/1‑150 (MQ=255) ttttcgcccaccaGCCCCGGGCCCTGCTGCTCGAGGCGTGTGGGGGGGACGGCCGTGCGCCGGGCGGGGGGTTGGAGGCGGGCGTCTGCGTGGTCGGGCCGGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGc < 2:1356922/143‑1 (MQ=255) ttCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTg > 2:10864771/1‑150 (MQ=255) cTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGcg > 1:9749035/1‑150 (MQ=255) tGCCCGCAGCACCTGCCCCGGCTGCCCGTTGCCTGTCGGCTGGACGGCCCTGCGCGTGGCGGGGGTTGGGACGCTGGCTTCAGCGTGGTCGCGCCCGCCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGcga < 1:7243990/150‑1 (MQ=255) ctgctgcaCCTGGCCGTGCTCCCCGAGGCCTGTGGGCTGTACGGCCCAGCGCCTGGGGCGGGGTAGGACGCTGGCTGCAGCGTCGTCGCGCCTGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGcgacga < 2:11131226/145‑1 (MQ=255) cagcagCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGcgacga > 2:10751953/1‑150 (MQ=255) gcaCCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAATCCg > 1:631333/1‑150 (MQ=255) cTGGCCCTGCTGCCCGAGGCCTGGCGGCTGGACGTCCGTGCGCCGGGCGGGGGGACGGCCGCGGGCTTCCGGGTCGTCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTc < 2:515980/150‑1 (MQ=255) gcccgggtgcCCGATGCCTGTCGGCTGGCGGGCCCGGCGCGTGGCGGGGGGTCGGCCGCTGGCGTCCCCGTCGTCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGtt < 2:8509944/143‑1 (MQ=255) ccTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGGACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTcc > 1:875274/1‑150 (MQ=255) gcACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCCGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCg > 2:6849470/1‑150 (MQ=255) cACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCga > 1:8160206/1‑150 (MQ=255) aCGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCgag > 2:2455695/1‑150 (MQ=255) gATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCCGCGCCCGACCGGGTACGGCGAGGGGCGCTGCGCCGAAGCCGCTTCGTTCCCGGCCGagag > 1:3801344/1‑150 (MQ=255) gATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCCGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGGTCCAGGCCGagag > 2:9101110/1‑150 (MQ=255) aTGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGTCGCCCGACGACCGGGAGCAGCGCCAGACCGAGTACTGCGAGGGCCTCAGCGACGAAGCCGATTCGTTCCAGGCCGagaga > 2:3656481/1‑149 (MQ=255) aTGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGt > 2:9477694/1‑150 (MQ=255) tggcggTCGCCTGGCCGCCCCTCCGCCTGGGGCGGGGTCGTCGGCTGGCGTACGCTTCGTCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTc < 1:1669071/145‑1 (MQ=255) gCCTGTCGGTGGGACGGCCCGGCGCGGGGCGGGGGGTCGGCCGCGGGCGTCAGCGTCGCCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTcg < 2:7539506/150‑1 (MQ=255) gTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGAAGTCGGGGAGCAGCGCCAGTCCGAGTACGGCGAGGGCCGCTGCGTCGAAGCCGATTCGGTCCAGGCCGAGAGTCGCGAt > 1:671192/1‑150 (MQ=255) tCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGGAGCGCCAGACCGAGTAAGGCGAGGGCCGCGGCGACGAAGCCGCTTCGTTCCAGGCCGCGAGTCGCGATg > 1:2016379/1‑150 (MQ=255) ggggCTGGCCGCCCCGGCGCCGGGCGGGGGGGAGGCCGGGGGCGTCAGGGTCGGCGCCCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATg < 1:4141829/148‑1 (MQ=255) gctgtccGGCCGTGCGCCTGGCGCGGGTTTGGCCGCGGGCGTCTGCGTCGTCGCGCCTGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGtc < 2:1441577/144‑1 (MQ=255) tGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGTCCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGTGTCGCGATGGtctc > 2:10612953/1‑150 (MQ=255) ggCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCCGAACGCGTACGGCGCGGGGCGCGGCGACGAAGCCGATTGGTTGCAGGCCGAGAGTAGCGATGGTCTCTCCGc > 1:3137485/1‑150 (MQ=255) gCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGcc > 2:4948748/1‑150 (MQ=255) gCCCGGCGCCGGGGGGGGGGTTGGCGGCGGGCGCCCGGGTGGTCGCCCCCGGCCCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGcc < 1:594853/150‑1 (MQ=255) cccTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGGTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCa > 2:8055289/1‑150 (MQ=255) gcgcCGGGGGGGGGGTAGGACGGTGGCGACTGCGCCGGCGCGCCTGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTa < 2:2823977/150‑1 (MQ=255) gcgtGGCGGGGGGTTGGACGCGGGGGTCTGCGTCGTCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAgc < 1:1482665/147‑1 (MQ=255) cggggCGGGGGGTTGGCCGCTGGCGTCAGGGTCTTCGCCCCCGGCCCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAgcg < 1:9006074/147‑1 (MQ=255) cTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAgcgc > 2:8842248/1‑150 (MQ=255) cTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAgcgc > 1:6356672/1‑150 (MQ=255) tGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTGGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCCTGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGGTCCAGGCCGAGTGTCGCGATGGTCTCTCCGCCAAGTAgcgcg > 1:7772594/1‑150 (MQ=255) tGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTAGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAtcgcg > 1:7117458/1‑150 (MQ=255) gcgGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCCGGCGCGCGTCGACGGGGAGCAGCGCCCGACCGCGTACGGCGTGGGCCGCTGCGCCGTAGCCGGTTCGTTCCAGGCCGAGTGTCGCGCTGGGCGCGCCGCCAAGTAGCGCGCCgc > 2:10264685/1‑149 (MQ=255) cgGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCCGGCGCGCGACGACGGGGAGCCGCGCCAGACCGCGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGGTCCAGGCCCAGAGTCGCGATGGGCTCTCCGCCAAGTAGCGCGCCGAg > 1:6088436/1‑150 (MQ=255) cggACGCGGGCGACCGGGTCGTCCCCCCCGGCCCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGAt < 1:516632/149‑1 (MQ=255) ggACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCCGCGACGGGGAGCCGCGCCAGACCGATTACGGCGAGGGCCGCCGCGACGAAGCCCATTCGTTACAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGGAGCGCGCCGAGGCCgcac > 1:10817056/1‑147 (MQ=255) ccgcgGGCTTCTGCGTCGTGGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATccc < 2:7101855/149‑1 (MQ=255) cGCTGGCGTCCGCGTCGTCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCg < 2:7244268/150‑1 (MQ=255) ggCGTCAGCGTCGTCGCCCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCAt < 2:8636689/150‑1 (MQ=255) cgactgCGTCGCGGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTg < 1:5745811/145‑1 (MQ=255) ccgCGTCGCCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcg < 1:8461845/148‑1 (MQ=255) cAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcg > 2:824451/1‑150 (MQ=255) gCGTCGTCGCGCCTGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggc < 2:4816072/150‑1 (MQ=255) gCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCCATTAGTTCCAGGCCGAGAGTCGCGATGGTCTCTACGCCAAGTAGCGCGCCGAGGCCGATCCCGGCAATggcggc > 2:7478071/1‑150 (MQ=255) cgtcgtCGCGCCCGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcg < 1:4410587/150‑1 (MQ=255) cgtcggCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcg < 2:10990192/150‑1 (MQ=255) gtcgtcGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcgg < 2:2594653/150‑1 (MQ=255) ggcgtcgCGCCTGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcgg < 1:4873379/148‑1 (MQ=255) tcgtcgCGCCTGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcggc < 2:5845238/150‑1 (MQ=255) tcgtcgCGCCCGGGGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcggc < 2:677953/150‑1 (MQ=255) tcgtcgCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcggc > 2:3563987/1‑150 (MQ=255) tcgtcgCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcggc > 1:2447499/1‑150 (MQ=255) tcgtcgCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcggc > 1:10031855/1‑150 (MQ=255) gcgccgcgCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTggcggcggc < 1:4251254/146‑1 (MQ=255) gtcgCGCCGGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTGGCGGCGGCGa < 2:9655329/150‑1 (MQ=255) gcgcCTGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTGGCGGCGGCGACGt < 2:7705936/150‑1 (MQ=255) gcCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTGGCGGCGGCGACGTTg > 1:969364/1‑150 (MQ=255) ccAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTGGCGGCGGCGACGTTGc < 2:2053145/150‑1 (MQ=255) | CTCTATCCGTCGCACCGGCATCCGTCGACGATCGTCAGGTGCTACCTGGATTTCTGCCAGCAGCACCTGGACCTGCTGCACGATGCCTGTCGGCTGGACGGCCCTGCGCCTGGCGCGGGGTAGGACGCTGGCGTCAGCGTCGTCGCGCCAGGCGCGCGACGACGGGGAGCAGCGCCAGACCGAGTACGGCGAGGGCCGCTGCGACGAAGCCGATTCGTTCCAGGCCGAGAGTCGCGATGGTCTCTCCGCCAAGTAGCGCGCCGAGGCCGATCCCGGCATTGGCGGCGGCGACGTTGCT > NC_008463/867229‑867526 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |