Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 2,030,086 | 0 | G | . | 35.8% | 774.7 / inf | 296 | coding (786/1269 nt) | wecC | UDP‑N‑acetyl‑D‑mannosamine dehydrogenase |
Reads supporting (aligned to +/- strand): ref base G (92/98); new base . (61/45); total (153/143) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.46e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 315 total aligned reads displayed.
CTAACGGAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTCTGCA > NC_008463/2029937‑2030235 | tAACGGAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑gg < 1:2235500/150‑1 (MQ=255) tAACGGAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑gg > 2:3599909/1‑150 (MQ=255) aCGGAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑gggg < 2:6067564/150‑1 (MQ=255) ggAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑gggggg > 2:148166/1‑150 (MQ=255) ggAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑gggggg > 1:981776/1‑150 (MQ=255) aaaaCAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑ggggggca > 1:6843348/1‑148 (MQ=255) aaaaCAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGc < 1:597422/150‑1 (MQ=255) aaaaCAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGc < 1:3643658/150‑1 (MQ=255) aaaCAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCa < 1:4694492/150‑1 (MQ=255) aaCAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCAt < 2:1715637/150‑1 (MQ=255) aCAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCAtt < 1:10183670/150‑1 (MQ=255) aCAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACAACAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑ggggggggcat < 2:3876347/150‑5 (MQ=255) gCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGcc > 2:1271013/1‑149 (MQ=255) gCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCa < 1:9256196/150‑1 (MQ=255) gCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCa < 1:1832775/150‑1 (MQ=255) cTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATc > 1:7032392/1‑150 (MQ=255) cTTCCGAGACCCTAACATTGCTTGTGCAAATGAGCTTGCCAATATCTGTGACAAGGTGGACCTCACTGTATGGGACCTGATCCGACTCGCGAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGcct < 2:5783433/150‑3 (MQ=255) cGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCa > 1:3193770/1‑150 (MQ=255) cGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAg > 2:4226037/1‑150 (MQ=255) tGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGt < 1:10011656/150‑1 (MQ=255) tGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGt > 1:6690965/1‑150 (MQ=255) tGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTc > 2:744644/1‑150 (MQ=255) tGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGACCGGGAGT‑‑GGGGGGCATTGCATCGCAGTc > 2:7147913/1‑150 (MQ=255) tGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCAGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAAGATTCTCCAGCCCGGGCCGGGAGT‑GCGGGGGCATTGCAACGCAGt > 2:8750713/1‑150 (MQ=255) gACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCg > 1:509424/1‑150 (MQ=255) gACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCg > 2:1987927/1‑150 (MQ=255) acacTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCg > 1:7432947/1‑150 (MQ=255) cacTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGAt > 1:167370/1‑150 (MQ=255) acTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGAt > 2:3660019/1‑150 (MQ=255) taccATTGCTTGTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCCATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATAGTCGCCAGCCAGGGCCGGGAGT‑GGGGGGGCAGTGCATCGCAGTCGATcc < 2:7050879/147‑1 (MQ=255) tAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCt < 2:6831672/150‑1 (MQ=255) aaCATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACATGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCtt < 2:2330504/150‑1 (MQ=255) aaCATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATcat > 1:10653484/1‑148 (MQ=255) aaCATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCt < 1:10745184/150‑1 (MQ=255) aCATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGGCATTGCATCGCAGTCGATCCt > 2:6379065/1‑150 (MQ=255) aCATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTg > 1:10079709/1‑150 (MQ=255) aCAGTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGCCATCAATGTATGGGAGCTGATCCGACTCGCTATTCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCtt < 2:5556670/150‑1 (MQ=255) cATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTACATCGCAGTCGATCCTTg > 1:1205631/1‑150 (MQ=255) ttGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGtt > 1:6591426/1‑150 (MQ=255) tGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTc < 1:906642/150‑1 (MQ=255) ttttGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCAt < 2:10653324/150‑1 (MQ=255) ttttGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCAt > 2:4068278/1‑150 (MQ=255) ttttGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATc < 1:3478549/150‑1 (MQ=255) tttGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATc < 1:8628687/150‑1 (MQ=255) tttGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCg < 1:4840845/150‑1 (MQ=255) tGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCgt < 2:9329577/150‑1 (MQ=255) gCAAATGAGCTTTCCATTATATGTGACAAGTTGGACATCAATGTCTGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCgta < 2:1931304/150‑1 (MQ=255) cAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCgtaag > 1:5325588/1‑150 (MQ=255) aaTGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCgtaagt > 1:10542785/1‑150 (MQ=255) gAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGtaagtaag > 1:4132617/1‑150 (MQ=255) gAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGa > 2:8384151/1‑150 (MQ=255) tCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGAcccc < 1:2655953/150‑1 (MQ=255) ccATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTg < 1:2398104/150‑1 (MQ=255) aTTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGAAGTCGATCCTTGGTTCATCGTAAGTAATACCCCTGga > 2:2012843/1‑150 (MQ=255) aTTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGgag > 2:6676471/1‑150 (MQ=255) tATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGagag > 1:8475177/1‑150 (MQ=255) aTCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGgaga < 1:1980733/150‑1 (MQ=255) gtgACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTc > 1:7161760/1‑150 (MQ=255) gACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCAACGTAAGTAAGACCCCTGGAGAGGCTCGc > 1:2422233/1‑150 (MQ=255) gACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCt > 1:5944247/1‑150 (MQ=255) aaGTTGGACCTCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGTGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTg > 2:5113876/1‑150 (MQ=255) aGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGTGGGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTg > 2:3233793/1‑150 (MQ=255) aGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGa < 1:8809484/150‑1 (MQ=255) aGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGAt > 2:569150/1‑150 (MQ=255) cATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAAc > 2:2625402/1‑150 (MQ=255) ggAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGt < 1:10853597/150‑1 (MQ=255) aGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCa < 2:10192452/150‑1 (MQ=255) gATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAatga < 2:546506/150‑1 (MQ=255) tCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATgg < 2:9535304/150‑1 (MQ=255) cGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGa < 2:7865678/150‑1 (MQ=255) cGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGa < 1:3595981/150‑1 (MQ=255) cGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGa < 2:4586107/150‑1 (MQ=255) gACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGaa < 2:2367931/150‑1 (MQ=255) cTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGTACTGCCCGTGAAGTCAATGATGGAAAGc > 2:3137254/1‑150 (MQ=255) cTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCtt > 2:9216443/1‑150 (MQ=255) aTCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTtgt > 1:3443919/1‑150 (MQ=255) aTCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAG‑‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTtgtg > 2:4375984/1‑150 (MQ=255) cGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTggg < 1:1303055/150‑1 (MQ=255) cACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGtt < 1:2722607/150‑1 (MQ=255) cACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTc > 1:11128023/1‑150 (MQ=255) cgcgAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGa < 1:7292439/150‑1 (MQ=255) gAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCGGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACa > 1:5849498/1‑150 (MQ=255) tCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGa < 2:902484/150‑1 (MQ=255) cAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGAt < 1:2159822/150‑1 (MQ=255) ttCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTaaaa < 1:2766429/150‑1 (MQ=255) tctcCAGCCAGGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATg > 1:393231/1‑150 (MQ=255) cagccagGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCt < 1:6205138/150‑1 (MQ=255) agccagGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTg < 1:8019232/150‑1 (MQ=255) agccagGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGt < 2:6273214/150‑1 (MQ=255) gccagGGCCGGGAGTGGGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTg > 1:449018/1‑150 (MQ=255) ccagGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTc > 1:770782/1‑150 (MQ=255) cagGGCCGGGAGTGGGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTc < 2:11153480/150‑1 (MQ=255) cagGGCCGGGAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTcgc > 1:8248647/1‑150 (MQ=255) ggCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCgg > 1:7785600/1‑150 (MQ=255) gCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGa < 2:7710166/150‑1 (MQ=255) ccGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAg < 2:4914042/150‑1 (MQ=255) gggAGT‑‑GGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGttt > 1:4430021/1‑150 (MQ=255) gAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTc < 2:2746981/150‑1 (MQ=255) gAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTc < 1:9536699/150‑1 (MQ=255) gAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTc < 2:6973203/150‑1 (MQ=255) | CTAACGGAAAACAGCTTCCGTGACACTAACATTGCTTTTGCAAATGAGCTTTCCATTATCTGTGACAAGTTGGACATCAATGTATGGGAGCTGATCCGACTCGCTAATCGTCACCCGCGAGTCAATATTCTCCAGCCAGGGCCGGGAGT‑GGGGGGGCATTGCATCGCAGTCGATCCTTGGTTCATCGTAAGTAAGACCCCTGGAGAGGCTCGCTTGATTCGAACTGCCCGTGAAGTCAATGATGGAAAGCCTTTGTGGGTTCTGAACAAGATTAAAATGGCTGTCGCGGAGTTTCTGCA > NC_008463/2029937‑2030235 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |