Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 6,352,993 | 0 | A | T | 23.8% | 891.8 / 72.2 | 378 | intergenic (+73/‑46) | dgcB/PA14_RS29035 | dimethylglycine demethylation protein DgcB/electron transfer flavoprotein subunit alpha/FixB family protein |
Reads supporting (aligned to +/- strand): ref base A (213/66); new base T (0/87); total (213/165) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.40e-42 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 409 total aligned reads displayed.
CGGAAGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGGCGGCGAGGTGC > NC_008463/6352844‑6353141 | cGGAAGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCaggga < 2:9506751/150‑1 (MQ=255) ggAAGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCagggag > 1:8324593/1‑150 (MQ=255) aaGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCagggaggg < 1:685648/150‑1 (MQ=255) aaGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCagggaggg < 2:8335730/150‑1 (MQ=255) gcgcTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAggggg < 2:5638509/150‑1 (MQ=255) cgcTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGc < 1:943481/150‑1 (MQ=255) cgcTGAGAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGTGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGTCAGCACGGATAGCGGCATCTCCATCCAGGGAGGGGGc < 2:2607263/150‑1 (MQ=255) agagCAGGCGTAAGCGCCGGCAAAATAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGa < 2:9783555/150‑1 (MQ=255) agCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGAcc > 2:4978189/1‑150 (MQ=255) agCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGAcc > 2:8119728/1‑150 (MQ=255) ggCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGt > 2:1985800/1‑150 (MQ=255) gAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGACTCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGcc > 2:10670268/1‑150 (MQ=255) gAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGcc > 2:4853630/1‑150 (MQ=255) cgccgcAAAAAACGCGGGGGCGGCGTGACGCGGTGGGGGTGGTGCATTGATGTTTGTGTCTAGCTTCACAGCGATGCCGCTGCTGCCCGGGGCCGCCCGGATCGCGGCCCCCCCCCCCCGGGTGGGGGCCGCGGGACCGGGTAGCCGCAg < 2:10290678/150‑1 (MQ=255) cgggCAAAAACGCCGGTGGGGCGTGAAGCCGGGGCGGAGTGGCTTTGATGAGATTTTCGAGCTTACAATCTAATCCGATGCTGACCGGGGCAGCACGGATTGCGGCCTCTCCCTCCCGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGcc < 2:7058204/148‑1 (MQ=255) cGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCca > 1:7857979/1‑150 (MQ=255) cGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCca > 1:3987010/1‑150 (MQ=255) ggCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCcac > 1:10682928/1‑150 (MQ=255) gCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCcaca > 1:8609851/1‑150 (MQ=255) gCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCcaca > 2:5491430/1‑150 (MQ=255) aaaaaaGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAgg > 2:7700181/1‑150 (MQ=255) aaaaaaGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAgg > 2:4709713/1‑150 (MQ=255) aaaaaGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGa > 2:9098977/1‑150 (MQ=255) cccGGTGCGGCGTGAAGCCGTGGCGGTGGTGCTTTGATGAGAGTGTCGAGCTCCACAGCGAATCCGCTGCTGACCGGGGCAGCACGGTTAGCGGCCTCCCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCAt < 2:1854064/149‑1 (MQ=255) ggggcggcgTGAAGCCGGGGCGGTGGTGCATTGATGAGAGTGTCGAGCTCCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCACCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTcc < 2:7313296/147‑1 (MQ=255) ggTGCGGCGTGAAGCCGTGGCGGCGGGGCATTGATGAGAGGGACGCGCTACCCATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCACTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTcc < 2:9132160/150‑1 (MQ=255) gcgTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACCTCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCAGTCCGCATGa > 1:7106116/1‑150 (MQ=255) gAAGCGGTGGCGGAGGTGCTTTGATTCGAGTGTCTAGCTTCACATCGCATCCGCTGGTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGa < 2:9281976/150‑1 (MQ=255) ccGTGGGGGAGGTGCATTGATGAGTGTGGCGCGGGACACATCGAATCCGGTGCTGCCCGGGGCAGCACGGATTGCGCCCTCGCCCCCCTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATc < 1:10851062/150‑1 (MQ=255) ccGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATc > 2:7543966/1‑150 (MQ=255) tGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtc > 1:3957722/1‑150 (MQ=255) tGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACAGCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtc > 1:161067/1‑150 (MQ=255) ggCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtcc > 1:9157632/1‑150 (MQ=255) gCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccg > 2:2672064/1‑150 (MQ=255) gCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccg > 1:6814153/1‑150 (MQ=255) gCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccg > 2:8376964/1‑150 (MQ=255) gCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccg > 2:2796325/1‑150 (MQ=255) gCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccg > 2:4309704/1‑150 (MQ=255) gggtggTGCATTTTTGAGAGGTTCGAGATTCACACCAAATCGGCTGCTGACGGGGCCAGAACGGATCGCGCCCTCTCCCTCCTGGTTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccgt < 1:11159832/146‑1 (MQ=255) gttggTGTATTGTTGTGTTTGTCTTGCTTCACAGCTATACCGTTGCTTACCGGGGCTGCACGTTTAGCGGCCTCTCCCCCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccgtc < 2:920050/147‑1 (MQ=255) ggAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATcgtccgtc > 1:2750617/1‑150 (MQ=255) cggTGCATTTATGAGAGTGTCGCGCTTCACATCTAATCCGCTGCTGACCGGGGCAGCACGGATCGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTcgc < 2:1824242/149‑1 (MQ=255) ggTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTcgcg > 1:55141/1‑150 (MQ=255) gTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGa > 1:9979592/1‑150 (MQ=255) gCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATc > 1:7587854/1‑150 (MQ=255) cATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATcc > 1:4400235/1‑150 (MQ=255) aTTGATGTGTGTTTCTAGCTTCAATTCGATTCCGCTGATGACCGGGGCAGATCGTTTAGGGGCCTCTCCCCACAGGGTGTGGGCGTCTGGACCGTGTAGCCGAATCCTCAGGAAGCATTACGCATGAACGACATCGTCCGTCGCGATCCa < 2:6748525/150‑1 (MQ=255) ttGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCAc > 1:6344534/1‑150 (MQ=255) tgatgtGAGTGTCGAGCTTCAACTCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCCGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCAcg < 2:6854080/150‑1 (MQ=255) atgaGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCAcgcg > 2:7983832/1‑150 (MQ=255) atgaGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCAcgcg > 2:9755562/1‑150 (MQ=255) agagTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCg > 2:10760802/1‑150 (MQ=255) agagTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCg > 1:5193767/1‑150 (MQ=255) gtgtCGCGCGTCCCATCGACTCCGCTGCTGCCCGGGGCAGCAGGGATTGCGGCCAGTCCCCCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAAt < 2:10969163/150‑1 (MQ=255) gtgtCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGTATTGCGGCCTCTCCCTCCTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAAt < 2:1535837/150‑1 (MQ=255) gtgtCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAAt > 2:6052698/1‑150 (MQ=255) tgtCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATg > 2:11071084/1‑150 (MQ=255) gtCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATgg > 1:10548785/1‑150 (MQ=255) gtCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATgg > 1:1368549/1‑150 (MQ=255) gcgcgCTACACAGCGAACCCGCGGCTCCCGGGGGCCGCAGGGATAGCGGCCTCCCCCCCCTGGGGGGGGGCCCCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGa < 1:9888737/146‑1 (MQ=255) cccctccacaCCGAAGCCGCTCCTGACCGGGGCAGCCCGGCTTGCGCCCTCCCCCACCCGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATc < 2:3352174/144‑1 (MQ=255) gCTTCACATCGAATCCGCGGCTGACCGGGGCAGCACGGATAGCGGCCACTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGc < 2:8229406/150‑1 (MQ=255) ttCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGccc > 1:9607875/1‑150 (MQ=255) acaTCTAATCCGCTGCTGACCGGGGCCGCACGTATCGCGGCCACCCCACCCTGGGTGGGGGCCCCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCa < 1:2384719/150‑1 (MQ=255) gAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGc > 2:9803610/1‑150 (MQ=255) aaTCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCCGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGcc > 2:10442535/1‑150 (MQ=255) aaTCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCCACCGcc > 2:3740201/1‑150 (MQ=255) aaTCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGcc > 2:8752030/1‑150 (MQ=255) aTCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCt > 1:7981539/1‑150 (MQ=255) tCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTg > 1:2530420/1‑150 (MQ=255) ccGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGc > 2:5246329/1‑150 (MQ=255) gctgctGACGGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCAt < 2:8917877/150‑1 (MQ=255) gctgctGACCGGGGCAGCACGTATAGCGGCCACTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCAt < 2:2466406/150‑1 (MQ=255) gctgctGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCAt > 1:5080469/1‑150 (MQ=255) gctgctGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCAt > 1:8522599/1‑150 (MQ=255) ctgctgACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCCGGGAGGGGGCCGCGGGACCGGGGAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATc > 2:8878858/1‑150 (MQ=255) ctgACGGGGGCACCACGGATCGCGGCCTCTCCCACCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGc < 2:10702398/150‑1 (MQ=255) tgACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCt > 1:4119007/1‑150 (MQ=255) gACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTg > 1:5982003/1‑150 (MQ=255) ggggCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCCACCGCCTGCATCCGCTGCATg > 2:1275435/1‑150 (MQ=255) ggggCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATg > 2:2971898/1‑150 (MQ=255) gcccccgggATCGCGGCCTCCCCCCCCCGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCgg < 1:10930704/143‑1 (MQ=255) cagcaCGTATAGCGGCCTCACCCTCCCGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGc < 1:10054947/150‑1 (MQ=255) agcaCGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGcc > 1:4179889/1‑150 (MQ=255) agcaCGGATAGCGGCCACTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGCTCGCCCGCAACCGCCTGCATCCGCTGCATGCGGcc > 1:6625976/1‑150 (MQ=255) cgtaTAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGc < 1:10986767/147‑1 (MQ=255) aTAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACt > 2:6530013/1‑150 (MQ=255) ttgcgcCCTCCCCCCCCTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTc < 1:2879053/148‑1 (MQ=255) tcgCGGCCCCCCCCACCGGGGTGGGGCCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTc < 1:9687524/148‑1 (MQ=255) aGCGGCCTCTCCCTCCAGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTcc < 2:2256808/150‑1 (MQ=255) gCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCg > 1:865984/1‑150 (MQ=255) ctccctccCGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAgg < 2:59140/150‑1 (MQ=255) ctccctccAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGAGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAgg > 1:129941/1‑150 (MQ=255) ccccctccTGGGGGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAgg < 1:1929508/148‑1 (MQ=255) tccctccAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAggc > 1:8998463/1‑150 (MQ=255) ctccTGGGTGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAggcggc < 1:3274823/150‑1 (MQ=255) tccAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGgcggcg > 1:10220046/1‑150 (MQ=255) cgggagggGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGGCGGCGAgg < 2:6298250/149‑1 (MQ=255) gggtgggGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGGCGGCGAGGt < 1:6704152/150‑1 (MQ=255) gggagggGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGGCGGCGAGGt > 1:1763513/1‑150 (MQ=255) | CGGAAGCGCTGATAGAGCAGGCGGAAGCGCCGGCAAAAAAGCCGGTGCGGCGTGAAGCCGTGGCGGAGGTGCATTGATGAGAGTGTCGAGCTTCACATCGAATCCGCTGCTGACCGGGGCAGCACGGATAGCGGCCTCTCCCTCCAGGGAGGGGGCCGCGGGACCGGGTAGCCGCAGCCACAGGAAGCATTCCGCATGAACGACATCGTCCGTCGCGATCCACGCGCCGAATGGATCGCCCGCAACCGCCTGCATCCGCTGCATGCGGCCATGCACTCCGCCCAAGGCGGCGAGGTGC > NC_008463/6352844‑6353141 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |