| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 208,433 | G→C | intergenic (‑39/+49) | atsA ← / ← PA14_RS00940 | arylsulfatase AtsA/ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 208,433 | 0 | G | C | 99.8% | 2277.5 / NA | 585 | intergenic (‑39/+49) | atsA/PA14_RS00940 | arylsulfatase AtsA/ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (253/331); minor base A (0/1); total (253/332) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 585 total aligned reads displayed.
TGGCCAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGTCCGTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCAGCAGCGCTT > NC_008463/208286‑208576 | tGGCCAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTc > 2:4434146/1‑150 (MQ=255) aGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGcccc < 1:6570602/150‑1 (MQ=255) aGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGcccc < 2:4113799/150‑1 (MQ=255) aGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGcccc < 2:8693413/150‑1 (MQ=255) aGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGcccc < 2:6829017/150‑1 (MQ=255) gggCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGccccc < 1:7149746/150‑1 (MQ=255) tCGAGGGTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCt < 2:8867896/150‑1 (MQ=255) cGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCtt < 1:11027972/150‑1 (MQ=255) aGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTcc < 1:9533824/150‑1 (MQ=255) gTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCg > 1:697852/1‑150 (MQ=255) cGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGACGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGAGGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAg > 2:5874926/1‑150 (MQ=255) ggCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAgg < 2:4818348/150‑1 (MQ=255) gCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAggg > 1:4944609/1‑150 (MQ=255) tctcGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGc < 2:1206096/150‑1 (MQ=255) ctcGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCTTCTGGATGGGAGGAGATGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGcc < 2:10543929/150‑1 (MQ=255) ctcGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGcc < 1:2088518/150‑1 (MQ=255) tcGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGTAAGGGCCa < 1:67634/150‑1 (MQ=255) gccgccGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCATTCCCGCAGGGGGAAAGGGCCAgg < 1:1255621/150‑1 (MQ=255) cgccgAAGGCGCCGATAACGGAGACGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGc < 2:6123344/150‑1 (MQ=255) gccgAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCa < 2:176289/150‑1 (MQ=255) ccgAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCaa < 2:3519649/150‑1 (MQ=255) ccgAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCaa < 2:8227108/150‑1 (MQ=255) cgAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAg < 1:2541840/150‑1 (MQ=255) cgAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAg < 1:7498339/150‑1 (MQ=255) aaGGCGCCGATATCGGAGTAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGCGAGGGTGGGGCCCTCGCCCCCGCACTTCCCGCAGGGGGAAAGGGCCAGGGCAAggg > 2:7832418/1‑150 (MQ=255) aaGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAggg > 2:3113639/1‑150 (MQ=255) cggCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCCGGATGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGCTGGGAGGAGCGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAgggg < 2:3473006/149‑1 (MQ=255) gcgcCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCt > 1:3964449/1‑150 (MQ=255) gcCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCttt < 2:2088013/150‑1 (MQ=255) ccGAGATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCtttt < 2:2856590/150‑1 (MQ=255) atatCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAg < 2:6728198/150‑1 (MQ=255) atatCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAg > 2:8364923/1‑150 (MQ=255) tCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCaa > 2:2533974/1‑150 (MQ=255) tCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCaa > 2:244234/1‑150 (MQ=255) cGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGCAAGGGCCAGGGCAAGGGGCTTTTCAGCAAg > 2:7982242/1‑150 (MQ=255) gagaAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCg < 1:6444007/150‑1 (MQ=255) agaAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGa < 1:8563226/150‑1 (MQ=255) aaGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAgg < 2:1334156/150‑1 (MQ=255) ccAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAAtt < 2:7228532/150‑1 (MQ=255) cAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAATGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTc > 1:4142396/1‑150 (MQ=255) cAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTc > 1:9746662/1‑150 (MQ=255) cgtcgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAgg < 1:2645354/150‑1 (MQ=255) gtcgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGACAGGGCCAGGGCAAGGGGCTGTTCAGCAAGCGAGGACTTCGAAggg > 2:6987132/1‑150 (MQ=255) gtcgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAggg < 2:8549206/150‑1 (MQ=255) tcgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGACTTCGAAGGGc > 2:1620920/1‑150 (MQ=255) tcgGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCGGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCTAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGc > 1:8983491/1‑150 (MQ=255) ggCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAg < 2:3906955/150‑1 (MQ=255) ggCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTACCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAg > 2:403984/1‑150 (MQ=255) gCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCACGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAgg > 2:5384682/1‑150 (MQ=255) gCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAgg < 1:819087/150‑1 (MQ=255) gacgaTCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGACTTCGAAGGGCAGGtt > 2:9409514/1‑150 (MQ=255) gacgaTCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGtt > 2:844900/1‑150 (MQ=255) aTCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTcc < 1:10905120/150‑1 (MQ=255) cACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCAc < 2:10823762/150‑1 (MQ=255) cACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCAc < 1:5617972/150‑1 (MQ=255) cAGTAAGTTGGGGCGTTTTCTCATGCGCGGGTCTCGTCTTGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGAAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCg < 2:10378477/150‑1 (MQ=255) aGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGt < 1:538278/150‑1 (MQ=255) aaGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTcgc > 2:7658296/1‑150 (MQ=255) aaGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTcgc < 2:5062659/150‑1 (MQ=255) aGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTcgcg < 1:9984131/150‑1 (MQ=255) gTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGTGGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGACCGGGCAAGGGGCTTATCAGCAAGCGAGGAATACGAAGGGCAGGTTTTCCACCCGTCgcgg > 1:4585840/1‑150 (MQ=255) gTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCgcgg > 1:5127596/1‑150 (MQ=255) ttGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCgcggc < 1:3721533/150‑1 (MQ=255) gggCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCgcggcggc < 1:2208228/150‑1 (MQ=255) gggCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGGGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCACGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGGTTTCCACCCGTCgcggcggc > 1:10366839/1‑150 (MQ=255) cTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACg > 2:9129400/1‑150 (MQ=255) caggcgcGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTa < 2:1031881/147‑1 (MQ=255) cATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTa < 1:4362147/150‑1 (MQ=255) aTGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTAc > 1:871972/1‑150 (MQ=255) aTGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTAc > 2:10192252/1‑150 (MQ=255) tGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACt < 2:4501305/150‑1 (MQ=255) gcgGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGc < 1:2887319/150‑1 (MQ=255) gcgGGTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGc < 2:462752/150‑1 (MQ=255) ggTCTCGTCTGGAGGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGt < 1:3249336/150‑1 (MQ=255) gTCTCGTGGGGATGGGAGGAGAGGGTGGGGCCCGCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGCGGACTTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACGCGCCGTc > 1:1550053/1‑150 (MQ=255) gTCTCGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTc > 1:8259062/1‑150 (MQ=255) tctcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcg > 2:9802572/1‑150 (MQ=255) ctcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGGTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcgg > 1:1000962/1‑150 (MQ=255) tcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcggc < 1:7425390/150‑1 (MQ=255) tcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcggc > 1:6219838/1‑150 (MQ=255) tcGTCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTcggc > 2:10568634/1‑150 (MQ=255) tCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGCAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAAATCGAAGGGCAGGTTTTCCACCCGACGCGGCGGCGGCGCGACGTCCTCGCCGTcggcggg > 1:1047712/1‑149 (MQ=255) tCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGACGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGt < 1:196115/150‑1 (MQ=255) tCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGt < 1:8670104/150‑1 (MQ=255) tCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGt > 1:7829010/1‑150 (MQ=255) tCTGGATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGt > 2:5630611/1‑150 (MQ=255) gATGGGAGGAGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGt < 1:8486069/150‑1 (MQ=255) ggaggaGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGt > 1:4847531/1‑150 (MQ=255) ggaggaGAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGt < 2:9260554/150‑1 (MQ=255) aggagAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTgc < 2:6545367/150‑1 (MQ=255) aggagAGGGTGGGGCCCTCGCCCCCGCCCGTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTgc < 1:7647501/150‑1 (MQ=255) ggagAGGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTgca > 2:7422519/1‑150 (MQ=255) gagaGGGGGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGACGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTgcag > 1:2342611/1‑150 (MQ=255) agagGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTgcagc > 1:3462269/1‑150 (MQ=255) gagGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGACTTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTgcagca > 2:8736406/1‑150 (MQ=255) gagGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTgcagca < 2:3844907/150‑1 (MQ=255) agGGTGGGGCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGcagcag < 1:9144830/150‑1 (MQ=255) ggtggggCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCAGCAgcg < 2:4216205/150‑1 (MQ=255) gtggggCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCAGCAgcgc < 1:1743758/150‑1 (MQ=255) ggggCCCTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCAGCAGCGCtt < 1:10176473/150‑1 (MQ=255) | TGGCCAGGGCGTCGAGGTTCGGCGTGGCGATCTCGCCGCCGAAGGCGCCGATATCGGAGAAGCCCAGGTCGTCGGCGACGATCACCAGGAAGTTGGGGCGTTTGCTCATGCGCGGGTCTCGTCTGGATGGGAGGAGAGGGTGGGTCCGTCGCCCCCGCCCTTCCCGCAGGGGGAAAGGGCCAGGGCAAGGGGCTTTTCAGCAAGCGAGGAATTCGAAGGGCAGGTTTTCCACCCGTCGCGGCGGCGGCGCGACGTACTCGCCGTCGGCGGTCAGTTCGTGCAGCAGCGCTT > NC_008463/208286‑208576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |