| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 888,497 | A→C | intergenic (+143/‑62) | PA14_RS04165 → / → PA14_RS04170 | sigma‑54‑dependent Fis family transcriptional regulator/LysE family translocator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 888,497 | 0 | A | C | 99.8% | 1761.7 / NA | 445 | intergenic (+143/‑62) | PA14_RS04165/PA14_RS04170 | sigma‑54‑dependent Fis family transcriptional regulator/LysE family translocator |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (240/204); total (241/204) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 452 total aligned reads displayed.
ACTGAGGTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTAAGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCATCGTCG > NC_008463/888350‑888643 | gTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGaaa > 2:5746642/1‑150 (MQ=255) tGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGGGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAAc < 1:138715/150‑1 (MQ=255) gcgcCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCCAAACCAGCCGTGAGCCTTGCCCCGTTACTGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAAcc < 2:7062952/150‑1 (MQ=255) ccggcggccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCAt < 2:10155610/150‑1 (MQ=255) ggcggccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgc > 2:2587556/1‑150 (MQ=255) gccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgc > 1:8998028/1‑150 (MQ=255) gccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgc > 1:5723537/1‑150 (MQ=255) gccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgc > 1:2553555/1‑150 (MQ=255) gccggcgCAGTCGTCAAGCGCGGAAAATCAAAACAAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgc > 2:622928/1‑150 (MQ=255) ccggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgcc > 2:10975545/1‑150 (MQ=255) cggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATgcccgccc > 2:10084931/1‑150 (MQ=255) ggcgCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGcccgcccc > 1:11005714/1‑150 (MQ=255) gcgcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGcccgccccg > 1:8274120/1‑150 (MQ=255) gcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCa > 1:10545064/1‑150 (MQ=255) gcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCa < 2:1762220/150‑1 (MQ=255) gcAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCa > 1:10102312/1‑150 (MQ=255) cAGTCGTCAAGCGCGGAACATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAc < 2:5891035/150‑1 (MQ=255) cAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAc > 1:9016224/1‑150 (MQ=255) cAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAc > 1:2382325/1‑150 (MQ=255) cgtcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagc < 2:6817329/150‑1 (MQ=255) tcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagcca > 1:1511242/1‑150 (MQ=255) tcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagcca > 2:9354363/1‑150 (MQ=255) tcAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagcca > 1:7831219/1‑150 (MQ=255) cAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCAccagccag < 1:3119790/150‑1 (MQ=255) aaGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACcagccagc > 1:7595952/1‑150 (MQ=255) cgGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCa < 1:10379550/150‑1 (MQ=255) gAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAAc > 2:10700998/1‑150 (MQ=255) aaaaTCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAAcc < 1:9736968/150‑1 (MQ=255) aaaTCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAAccc > 2:6580153/1‑150 (MQ=255) aaTCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCACCCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCg > 2:8027897/1‑150 (MQ=255) aaTCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCg > 2:4726769/1‑150 (MQ=255) aTCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGa > 1:4194926/1‑150 (MQ=255) ccaacccAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGGTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGAcc < 2:7595523/145‑1 (MQ=255) aaaCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAg > 1:6090016/1‑150 (MQ=255) aCCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAggg > 1:2866735/1‑150 (MQ=255) ccAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGa > 2:5531182/1‑150 (MQ=255) gCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGtt < 2:1955505/150‑1 (MQ=255) gagAGCCTTGCCCCGTTCCTGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCATGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGa < 2:1582004/148‑1 (MQ=255) aGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGAccc > 2:380859/1‑150 (MQ=255) gCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCa < 2:4021722/150‑1 (MQ=255) cTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATg < 1:5546909/150‑1 (MQ=255) ttGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGc < 2:2380949/150‑1 (MQ=255) gtGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGc < 2:7980388/149‑1 (MQ=255) gCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCg > 1:6411686/1‑150 (MQ=255) ccccGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGc < 1:9164253/150‑1 (MQ=255) ccGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCAAGCCGCTa > 2:2696828/1‑150 (MQ=255) gTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGc > 2:6652320/1‑150 (MQ=255) aaTGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCct > 1:4370878/1‑150 (MQ=255) gCCGGTGGGCTTTCCCTGTAGCGGTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCctgct < 2:7810754/150‑1 (MQ=255) ccGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCctgctg > 1:2077850/1‑150 (MQ=255) ccGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCctgctg > 2:3519295/1‑150 (MQ=255) cGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCtgctgc > 2:4273634/1‑150 (MQ=255) cGGTGGGCTTTCCCTGTAGCGGTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCtgctgc < 2:8472139/150‑1 (MQ=255) ggTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTgctgct > 1:1644359/1‑150 (MQ=255) ggCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGcc < 2:5381383/150‑1 (MQ=255) gCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTGCGACCCATGCCGCTAGCCCTGCTGCTCGccc > 2:10368265/1‑149 (MQ=255) tttCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATg < 2:4991354/150‑1 (MQ=255) ttCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATgg > 2:9581412/1‑150 (MQ=255) tCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCCGCCAGCCCGCAACCCGACCAGGGAGTACGACCCATGCCGCTAGCCCTGCTGCTCGCCATggg < 1:4907607/150‑1 (MQ=255) tCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATggg < 2:3431928/150‑1 (MQ=255) tGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGcgcg > 1:7052072/1‑150 (MQ=255) gTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGt > 1:10932937/1‑150 (MQ=255) tAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGtt > 1:3046514/1‑150 (MQ=255) tAGCGTTCCGGGCAGCGGCGCAACCCGTACGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGta < 1:3536511/150‑2 (MQ=255) aGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTtc < 1:6863986/150‑1 (MQ=255) gTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTcc < 1:8434650/150‑1 (MQ=255) gTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTcc < 1:3412859/150‑1 (MQ=255) ccGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTg < 1:9570814/150‑1 (MQ=255) gggCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAg < 2:7014662/150‑1 (MQ=255) ggCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGc > 2:6002841/1‑150 (MQ=255) gCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGcc < 1:7671159/150‑1 (MQ=255) gCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGcc > 2:7477947/1‑150 (MQ=255) cAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCt < 1:521588/150‑1 (MQ=255) gcggcgCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGt < 2:4513875/150‑1 (MQ=255) cgcAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGAt > 2:10317294/1‑150 (MQ=255) cgcAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGAt > 2:1128946/1‑150 (MQ=255) gcAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTGCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGAtt > 1:1234439/1‑150 (MQ=255) aCCCGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTcc < 1:8365729/150‑1 (MQ=255) ccGTTCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTcccc < 1:8167609/150‑1 (MQ=255) tCGGTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggt < 1:8721383/150‑1 (MQ=255) gTCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccg < 2:3006903/150‑1 (MQ=255) tCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCATCCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccgg < 2:10734984/150‑1 (MQ=255) tCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCCTGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccgg < 1:3958153/150‑1 (MQ=255) tCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccgg < 1:1776927/150‑1 (MQ=255) tCGCGCCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCccggtccgg < 1:7372228/150‑1 (MQ=255) gcgcCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTg > 2:3215144/1‑150 (MQ=255) cgcCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGa > 1:7141456/1‑150 (MQ=255) gcCCCGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGaa > 1:6334103/1‑150 (MQ=255) ccccGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAAc > 2:7256248/1‑150 (MQ=255) ccccGCCAGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAAc > 2:6910904/1‑150 (MQ=255) aGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCa < 1:9902702/150‑1 (MQ=255) aGGAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCa < 1:11185371/150‑1 (MQ=255) ggAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAt > 2:8758226/1‑150 (MQ=255) ggAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAt < 2:6437436/150‑1 (MQ=255) gAGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtc < 1:5363545/150‑1 (MQ=255) aGCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcg > 2:908831/1‑150 (MQ=255) gCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcgt < 1:10749541/150‑1 (MQ=255) gCCTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcgt < 1:2753349/150‑1 (MQ=255) ccTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCAGGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcgtc < 1:3242404/150‑1 (MQ=255) cTACGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCAtcgtcg < 1:1079865/150‑1 (MQ=255) | ACTGAGGTGCGCCGGCGGCCGGCGCAGTCGTCAAGCGCGGAAAATCAAAACCAGCCGTGAGCCTTGCCCCGTTAATGCCGGTGGGCTTTCCCTGTAGCGTTCCGGGCAGCGGCGCAACCCGTTCGGTCGCGCCCCGCCAGGAGCCTAAGGAGGAAACCCATGCCCGCCCCGCACCAGCCAGCCCGCAACCCGACCAGGGAGTTCGACCCATGCCGCTAGCCCTGCTGCTCGCCATGGGCGCGTTCTCCCTGAGCCTGTCGATTTCCCCCGGTCCGGTGAACCTGACCATCGTCG > NC_008463/888350‑888643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |