| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,315,218 | Δ1 bp | coding (325/330 nt) | PA14_RS31685 → | FimD/PapC N‑terminal domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,315,216 | 0 | C | . | 99.8% | 2330.3 / ‑3.5 | 471 | coding (323/330 nt) | PA14_RS31685 | FimD/PapC N‑terminal domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (232/238); total (233/238) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 496 total aligned reads displayed.
CCAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTA > NC_008463/5315067‑5315361 | cAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgcc > 1:5677599/1‑150 (MQ=255) cAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgcc > 2:10963172/1‑150 (MQ=255) ggTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgcctc > 2:4720087/1‑148 (MQ=255) gTGGACCCCGGAACCGACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTccgccccgcctct < 1:6835567/150‑4 (MQ=255) ccccGGAACCTACCCTGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGc < 1:8532863/150‑1 (MQ=255) gAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCg > 2:2607469/1‑150 (MQ=255) aaCCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGt > 2:1431065/1‑150 (MQ=255) aCCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAg > 1:7821681/1‑150 (MQ=255) ccATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgc > 1:7175965/1‑150 (MQ=255) ccATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgc > 1:6635517/1‑150 (MQ=255) cATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgcg > 1:1572986/1‑150 (MQ=255) cATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgcg > 2:7169156/1‑150 (MQ=255) aTGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAgcgc > 2:3004145/1‑150 (MQ=255) gTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCt > 2:8984117/1‑150 (MQ=255) tCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTg < 2:654765/150‑1 (MQ=255) gATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGga < 1:8026739/150‑1 (MQ=255) aTGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgag < 2:3823800/150‑1 (MQ=255) aTGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgag > 1:9207563/1‑150 (MQ=255) tGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgaga > 1:10256029/1‑150 (MQ=255) tGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCAGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGgaga > 2:10791162/1‑150 (MQ=255) gTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAt < 1:9795020/150‑1 (MQ=255) tCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCGGGAGAtt > 1:11077364/1‑150 (MQ=255) acTAACTCAACGGCAGCTACGCCAGACGCACCCGCCTCGCCTACCGCCCCCGGGCCGGCGGCGTCAAACCCAGCCTCGGCGACCGCTTCAGGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGAta < 2:9351990/149‑2 (MQ=255) aTCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGcc < 1:9597806/150‑1 (MQ=255) aTCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGcc < 1:6292211/150‑1 (MQ=255) tcAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGACCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTgg > 2:5783606/1‑150 (MQ=255) ggCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTg < 2:6157552/150‑1 (MQ=255) gCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCACGCGCCTGGAGATTGCCTGGGGCTgg > 2:10370215/1‑150 (MQ=255) gCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTgg > 1:4209418/1‑150 (MQ=255) cAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGga > 2:8625671/1‑150 (MQ=255) aGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaa > 2:6445267/1‑150 (MQ=255) aGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaa > 2:4601868/1‑150 (MQ=255) cTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaaga > 1:5244927/1‑150 (MQ=255) cTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaaga < 1:4550583/150‑1 (MQ=255) tACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaagac > 2:8801806/1‑149 (MQ=255) tACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaagaa > 1:8882244/1‑150 (MQ=255) tACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaagaa < 2:6332963/150‑1 (MQ=255) tACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTGCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGgaagaa > 2:2016356/1‑150 (MQ=255) cGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACg > 2:4336288/1‑150 (MQ=255) ccAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGcc < 2:2252629/150‑1 (MQ=255) gTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGc < 1:4912410/150‑1 (MQ=255) gTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGc < 1:4886332/150‑1 (MQ=255) gTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGc > 1:9993270/1‑150 (MQ=255) tCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGACCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGcc > 2:5493318/1‑150 (MQ=255) tCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGcc < 1:7903348/150‑1 (MQ=255) tCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGcc < 1:5823306/150‑1 (MQ=255) cACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAgg < 2:4455116/150‑1 (MQ=255) ccAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCt < 1:7555561/150‑1 (MQ=255) cAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTc < 2:7973912/150‑1 (MQ=255) aGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCg > 1:2771588/1‑150 (MQ=255) tCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCt < 1:2592100/150‑1 (MQ=255) tCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCt < 1:9669019/150‑1 (MQ=255) aGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCa < 1:3903742/150‑1 (MQ=255) gTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCaa > 1:10377004/1‑150 (MQ=255) ttCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAt > 1:287322/1‑150 (MQ=255) ccGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAAtct < 1:3061380/150‑1 (MQ=255) ccccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGac > 2:8333595/1‑150 (MQ=255) cccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGaca < 2:1710139/150‑1 (MQ=255) ccGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGacac < 2:5280232/150‑1 (MQ=255) ggCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGc > 1:4094312/1‑150 (MQ=255) gCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGTTTGCCTGGGGCTGGACGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGcc > 2:846963/1‑150 (MQ=255) cggcggCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCt < 2:1182740/150‑1 (MQ=255) ggcggcGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCTACCGTCAATCTCGACACCGCCCtt > 2:3134479/1‑150 (MQ=255) gcggcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTc < 1:6095956/150‑1 (MQ=255) gcggcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTc > 1:3258879/1‑150 (MQ=255) agcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTg < 1:4376507/149‑1 (MQ=255) gcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgc > 2:9164336/1‑150 (MQ=255) gcgTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgc > 1:10002697/1‑150 (MQ=255) gTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgcgc < 2:5163529/150‑1 (MQ=255) gTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTgcgc > 2:6074297/1‑150 (MQ=255) aaaCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTc > 2:3481369/1‑150 (MQ=255) aaCCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCg > 1:7669765/1‑150 (MQ=255) cccTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAt < 2:7742818/150‑1 (MQ=255) ccTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGATCGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtc < 1:10685090/150‑1 (MQ=255) gCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGAtctct > 2:3988145/1‑150 (MQ=255) ttCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCg > 1:9381951/1‑150 (MQ=255) ttCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGATGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCg < 2:6809348/150‑1 (MQ=255) tCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCgg < 2:7386617/150‑1 (MQ=255) tCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCgg < 1:2220951/150‑1 (MQ=255) cGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGcc < 1:3710588/150‑1 (MQ=255) gAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGccc > 2:2431975/1‑150 (MQ=255) aaCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGcccc > 1:3493707/1‑150 (MQ=255) aCGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCa < 1:1881211/150‑1 (MQ=255) cGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAg < 1:9472652/150‑1 (MQ=255) gCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAgg < 1:3937099/150‑1 (MQ=255) cttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCCATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCct < 2:10351630/150‑1 (MQ=255) cttGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCct > 1:21427/1‑150 (MQ=255) tGCGCCGGACGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCctgc > 2:9590637/1‑150 (MQ=255) aCGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATc < 1:7347276/150‑1 (MQ=255) aCGCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATc > 1:7000891/1‑150 (MQ=255) gCTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCaa < 1:8247345/150‑1 (MQ=255) cTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCATTCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAg > 2:5000991/1‑150 (MQ=255) cTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAg > 1:595300/1‑150 (MQ=255) cTGGGCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAg < 1:5443321/150‑1 (MQ=255) gggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGcc > 2:10613554/1‑150 (MQ=255) gggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGcc > 1:5186004/1‑150 (MQ=255) gggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGcc > 1:124456/1‑150 (MQ=255) ggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCa > 1:35956/1‑150 (MQ=255) ggCGTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCa < 1:10602226/150‑1 (MQ=255) gTCCGCCCCG‑CCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTGCAATCTCGACACCGCCCTGCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATGTCAAGCCAcgc > 2:2676804/1‑150 (MQ=255) | CCAGGTGGACCCCGGAACCTACCATGTCGATGTCTATCTCAACGGCAGCTACGCCAGTCGCACCAGGATCGAGTTCCGCCCCCGGGCCGGCGGCGTCAAACCCTGCTTCGGCGAACGCTTCTTGCGCCGGACGCTGGGCGTCCGCCCCGCCCTCTGAGGCCGGCGTGCAAGCGCCTGGAGATTGCCTGGGGCTGGAAGAACGCCTGCCAGGCTCGACCTTCAATCTCGACACCGCCCTTCTGCGCCTCGATCTCTCGGTGCCCCAGGCCCTGCTGGATATCAAGCCACGCGGCTA > NC_008463/5315067‑5315361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |