| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,341,704 | Δ1 bp | pseudogene (664/957 nt) | PA14_RS10890 → | DUF58 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,341,702 | 0 | C | . | 97.6% | 2363.3 / 47.9 | 504 | pseudogene (662/957 nt) | PA14_RS10890 | DUF58 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (5/7); new base . (261/229); total (267/237) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 519 total aligned reads displayed.
GCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTG > NC_008463/2341552‑2341847 | gCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAcc > 2:10967877/1‑150 (MQ=255)gCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAcc < 2:1219321/150‑1 (MQ=255) gggTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccagc < 2:5030998/150‑4 (MQ=255) ggTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGAGGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccagcc < 2:4804730/150‑5 (MQ=255) tCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCgg < 1:9373042/150‑1 (MQ=255) cGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCggg < 1:8719137/150‑1 (MQ=255) cGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCggg < 2:2624696/150‑1 (MQ=255) aCCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCg > 2:7504079/1‑150 (MQ=255) ccTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGa > 1:9478973/1‑150 (MQ=255) gcgccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTc < 2:7729151/147‑1 (MQ=255) cgccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTcg < 1:423955/148‑1 (MQ=255) ccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTcgcg < 1:10560514/150‑1 (MQ=255) cagcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcgg < 2:2215174/150‑1 (MQ=255) agcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggc < 2:1393487/150‑1 (MQ=255) agcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggc > 2:3212903/1‑150 (MQ=255) cagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcgg < 2:6787199/150‑1 (MQ=255) agGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcggc > 1:4917629/1‑150 (MQ=255) gcgcTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCGGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGgcgc < 1:4070594/150‑1 (MQ=255) cTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTg < 1:547922/150‑1 (MQ=255) cTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTg > 2:5162864/1‑150 (MQ=255) tGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGTCTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGc > 1:1483877/1‑150 (MQ=255) ggTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCa > 2:5730248/1‑150 (MQ=255) tCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCAcg > 2:10311782/1‑149 (MQ=255) tCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACt < 1:9926954/150‑1 (MQ=255) tCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACt > 2:10117416/1‑150 (MQ=255) aCCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGa > 1:7052831/1‑150 (MQ=255) ccTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAg < 1:10313017/150‑1 (MQ=255) cTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAgg < 1:5295658/150‑1 (MQ=255) ggCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGt < 2:8033769/150‑1 (MQ=255) ggCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGAAGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGt > 2:5613374/1‑150 (MQ=255) ggCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGt < 2:8453342/150‑1 (MQ=255) gCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtt > 1:4972526/1‑150 (MQ=255) ccGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGttt < 2:391126/150‑1 (MQ=255) cGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtttt > 2:2901684/1‑150 (MQ=255) cGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtttt < 1:7356572/150‑1 (MQ=255) cGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtttt > 1:339194/1‑150 (MQ=255) cTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTcc > 1:6810120/1‑150 (MQ=255) tGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTccc > 2:4572709/1‑150 (MQ=255) ggCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCg > 2:1971158/1‑150 (MQ=255) ggCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCg < 1:6233510/150‑1 (MQ=255) gCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGt > 1:10013721/1‑150 (MQ=255) gCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGcc < 1:4606295/150‑1 (MQ=255) cgagccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCa < 2:4102312/146‑1 (MQ=255) cgagccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCa < 1:9873079/146‑1 (MQ=255) cgagccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCa > 1:9168510/5‑150 (MQ=255) gagccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAg > 2:9693454/4‑150 (MQ=255) agccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAgg > 1:2183861/3‑150 (MQ=255) cGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGgc > 1:884711/1‑150 (MQ=255) gTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGgct > 2:6099977/1‑150 (MQ=255) cgcgCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACAGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGt < 1:3904829/150‑1 (MQ=255) cgcCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACGACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGa < 2:9586213/150‑1 (MQ=255) gcCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGaa > 1:6430732/1‑150 (MQ=255) gcCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGaa < 2:7549051/150‑1 (MQ=255) ccGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAg > 1:1834277/1‑150 (MQ=255) ccGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAg < 1:6672002/150‑1 (MQ=255) cGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAgg < 1:2595065/150‑1 (MQ=255) ggCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGAc < 2:6945189/150‑1 (MQ=255) gcgcGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGTTACTGCGCGCCTA‑CCAGCCGGGCGACTCGCTGCGGCGCCTGACCTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACt < 2:1661988/150‑1 (MQ=255) gcgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTc < 1:772659/150‑1 (MQ=255) gcgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTc < 1:768398/150‑1 (MQ=255) gcgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTc < 1:5739748/150‑1 (MQ=255) ggaggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgc > 1:7156326/1‑150 (MQ=255) cggaGGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACGACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgccg < 2:10693713/149‑1 (MQ=255) ggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGCCTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgccgc > 1:3743254/1‑150 (MQ=255) ggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGAGACGACGACTACCAGGGACTCCGCGCCTA‑CCAGCCGGGCGACTCGAGGCGGCGCATGCACTGGACGGCGTTAACCCGTGGCCAGGGGCTGCTCGTGCAGTACTTcgccgc > 2:8183909/1‑150 (MQ=255) gAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCT‑CCCAGCCGGGCGACGCGCGGCGGCGCGTGCACGGGAAGGCGTTTGCCCGTGGCGAGGGGCTGCTGGTGAAGGACTTCGCCGCGCGcggc > 2:4896338/1‑150 (MQ=255) aGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcggcg > 2:3642365/1‑150 (MQ=255) ggACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGGTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcggcgg > 1:6776831/1‑150 (MQ=255) ggggCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGa > 2:376450/1‑150 (MQ=255) gggCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGAc < 2:7873928/150‑1 (MQ=255) cgcgcgcTGGCGAGCACGGGCGTCGACGACTCCCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTCAAGGACTTCGCCGCGCTCGGCGGGGAAGACCtg < 2:10633865/150‑1 (MQ=255) cgcgcgcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGACGGACTTCGCCGCGCTCGGCGGGGAAGACCtg > 1:10792758/1‑150 (MQ=255) cgcgcgcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCtg < 2:6703884/150‑1 (MQ=255) gcgcgcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCtgt < 2:3100837/150‑1 (MQ=255) gcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCt > 1:9041116/1‑150 (MQ=255) gcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCt < 2:5258925/150‑1 (MQ=255) cTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTg > 1:3238799/1‑150 (MQ=255) ggCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGTCCTGTGGCTGGa > 1:4412902/1‑150 (MQ=255) gCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGaa > 2:5911494/1‑150 (MQ=255) cGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGACGACCTGTGGCTGGAAt > 2:6461250/1‑150 (MQ=255) cGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAAt < 2:2367307/150‑1 (MQ=255) cGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAAt > 2:8357782/1‑150 (MQ=255) aGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTc > 2:8773253/1‑150 (MQ=255) gCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCg < 1:1118747/150‑1 (MQ=255) gCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCg > 2:4250524/1‑150 (MQ=255) cGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAgc < 1:2525/150‑1 (MQ=255) cGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCt < 2:7135287/150‑1 (MQ=255) tCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTcg < 1:7993915/150‑1 (MQ=255) acgacTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGACTTCGAGCGCCTcggcg > 2:10426714/1‑150 (MQ=255) acgacTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTcggcg < 1:8329455/150‑1 (MQ=255) acTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGGCAGGGGCTGCTGGTGAAGGTCTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCgggg < 1:10964001/150‑1 (MQ=255) cTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGACGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGa > 2:3379387/1‑150 (MQ=255) ccAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAtct < 2:9359333/150‑1 (MQ=255) gggACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGa > 2:6330674/1‑150 (MQ=255) gggACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGa > 2:6170887/1‑150 (MQ=255) ggACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGaa < 1:7841045/150‑1 (MQ=255) gACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGaaa < 1:5968732/150‑1 (MQ=255) acggcgcgcCTACCC‑GCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGATGTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAg < 1:2943025/147‑1 (MQ=255) cTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGt < 2:9204672/150‑1 (MQ=255) cTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGt < 1:8423024/150‑1 (MQ=255) | GCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTG > NC_008463/2341552‑2341847 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |