BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_008463	3,515,863	T→C	intergenic (+617/+267)	PA14_RS16005 → / ← PA14_RS16010	AAA family ATPase/DUF4354 family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_008463	3,515,863	0	T	C	100.0%	1128.9 / NA	304	intergenic (+617/+267)	PA14_RS16005/PA14_RS16010	AAA family ATPase/DUF4354 family protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (138/166); total (138/166)

Only 100 of 305 total aligned reads displayed.

ATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGCCCCCAGCCCAGGCAACCAA  >  NC_008463/3515717‑3516008

ataCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCGCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCa                                                                                                                                                   <  2:9365979/150‑1 (MQ=255)

 taCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAc                                                                                                                                                  >  1:5817891/1‑150 (MQ=255)

   cAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAacc                                                                                                                                                >  2:3637323/1‑150 (MQ=255)

       ccctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTTCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAc                                                                                                                                            <  2:3982319/150‑1 (MQ=255)

       ccctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAAc                                                                                                                                            >  1:10800662/1‑150 (MQ=255)

          tccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCct                                                                                                                                         <  2:7182256/150‑1 (MQ=255)

          tccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAAccca                                                                                                                                         >  1:8221228/1‑149 (MQ=255)

           ccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCctc                                                                                                                                        >  2:3410019/1‑150 (MQ=255)

            cctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCctct                                                                                                                                       <  2:9757552/150‑1 (MQ=255)

             ctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCtctc                                                                                                                                      <  2:10456037/150‑1 (MQ=255)

              tAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTAACCCCAAcccacacc                                                                                                                                     >  1:2491955/1‑145 (MQ=255)

              tAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTcc                                                                                                                                     <  2:3270876/150‑1 (MQ=255)

               aaGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACTccc                                                                                                                                    >  2:6721783/1‑150 (MQ=255)

                 gCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGc                                                                                                                                  <  1:10870720/150‑1 (MQ=255)

                 gCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGc                                                                                                                                  >  2:7948877/1‑150 (MQ=255)

                  ccATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAACCCACACCCGCa                                                                                                                                 >  2:7804455/1‑150 (MQ=255)

                  ccATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAAACCACTCCCCCa                                                                                                                                 >  2:5501848/1‑150 (MQ=255)

                   cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCAc                                                                                                                                <  1:8935502/150‑1 (MQ=255)

                   cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCAc                                                                                                                                <  2:483286/150‑1 (MQ=255)

                       gCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTAACCCCAACCCACACCCGCACGCgg                                                                                                                            >  2:1242559/1‑150 (MQ=255)

                        cccTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGACTGTGGTGTTGGCCCGCACCCCAAACCACTCCCCCAccccgg                                                                                                                           >  1:5961057/1‑145 (MQ=255)

                         ccTTCCCCCTACCTGAACGGCACACCTATGGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGga                                                                                                                          <  2:193963/150‑1 (MQ=255)

                          cTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGgag                                                                                                                         <  1:1631662/150‑1 (MQ=255)

                             ccccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑gg                                                                                                                     <  1:9435365/150‑1 (MQ=255)

                              cccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCAAACCCCAAACCACAACCCCACCCGGGGGT‑ggg                                                                                                                    >  2:2985360/1‑150 (MQ=255)

                               ccATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑gggg                                                                                                                   <  1:10016263/150‑1 (MQ=255)

                               ccATACCTGAACGGCACACCTAGTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑gggg                                                                                                                   <  2:5711515/150‑1 (MQ=255)

                                 agaCCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGc                                                                                                                 <  2:9590772/148‑1 (MQ=255)

                                 aTACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGc                                                                                                                 <  1:9893539/150‑1 (MQ=255)

                                  tcccagAACGGCACACCTAGTGCCACCCGCAAAACCCCACCCTCCCCCGCTGCTCACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGA‑GGGGGcc                                                                                                                <  2:7995753/145‑1 (MQ=255)

                                     cTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCCCCACCCAAACCACAACCCCCCGCGGGGGG‑GGGGGGC‑ggg                                                                                                            >  1:9324889/1‑150 (MQ=255)

                                       gAACTGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGATGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTAACCCCAACCCACTCCCGCACGCCGGTGG‑TGGGGAC‑GGGCg                                                                                                          >  2:1658315/1‑150 (MQ=255)

                                        aaCGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCACGCCCGCACGCCGGAGA‑GGGGGCC‑GGGCgg                                                                                                         >  1:6776983/1‑149 (MQ=255)

                                            gCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCCCCCCAACCCTCTCCCGCCCGCGGGAGT‑GGGGGCC‑GGGCGTGccg                                                                                                     >  2:8826477/1‑149 (MQ=255)

                                              acacCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCCCCCCAACCCTCACCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCtgg                                                                                                   >  2:4397316/1‑148 (MQ=255)

                                               cacCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCACTACCGCCCGCGGGGGA‑GGGGGGC‑GGGCGGGccgggt                                                                                                  >  2:5398831/1‑146 (MQ=255)

                                                acCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAACCACTCCCCCACCCGGGGGG‑TGGGGCC‑CGGCCTGCCTggtg                                                                                                 >  2:10058063/1‑150 (MQ=255)

                                                acCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTtgtg                                                                                                 <  1:1726172/150‑1 (MQ=255)

                                                acCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTAAACCCAAACCACTACCCCACGCGGGTGA‑GGGGGCC‑CGGCGTGGCGtgtg                                                                                                 >  1:7228951/1‑150 (MQ=255)

                                                 ccTATTGCCACCCGCAAAACCACCACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTgg                                                                                                <  2:8695651/150‑1 (MQ=255)

                                                 ccTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCCACCCACAACCGCACGCGGGGGG‑GGGGGGC‑GGGGGGGGCGTGTgg                                                                                                >  1:97017/1‑150 (MQ=255)

                                                 ccTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTgg                                                                                                <  2:7301869/150‑1 (MQ=255)

                                                     ttGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACAACCCAAACCACACCCCCACGCCGGAGA‑GGGGGCC‑CGGCGTGCCGTTTGGGTCg                                                                                            >  1:10665819/1‑150 (MQ=255)

                                                      tGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGGC‑GGGCGTGCCTTGTGGGTCgg                                                                                           >  2:10802179/1‑149 (MQ=255)

                                                       gCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAACCCCACCCCCACGCGGGGGA‑GGGGGGC‑GGGGGGGGCGTGTGGGGCGAg                                                                                          >  1:6661026/1‑150 (MQ=255)

                                                       gCCACCCGCAAAACCACAACCTCCCCCGCGGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAg                                                                                          <  1:4995555/150‑1 (MQ=255)

                                                          aCCCGCAAAACCCCAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAgcgc                                                                                       <  2:2616678/150‑1 (MQ=255)

                                                             cGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCctc                                                                                    <  2:5924599/150‑1 (MQ=255)

                                                             cGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCctc                                                                                    <  2:655441/150‑1 (MQ=255)

                                                                  aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCGCTCACCCCACACCCCTCCCGCCCCCGGGGGG‑GGGGGGC‑GGGCGTGGCGGGTGGGGAGTGCGccaggcggg                                                                               >  1:6785799/1‑143 (MQ=255)

                                                                   aCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCACCCACTCCCGCACGCCGGAGA‑GGGGGGC‑GGGCGGGCCCTGTGGGGCGAGCCCCCCGCGCgg                                                                              >  2:10116645/1‑150 (MQ=255)

                                                                   aCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACTCCCGCACGCGGGAGAGGGGGGCCGGGGGGTGCGGTGGGGGTCGCGCCCcgcgcgc                                                                                >  1:6244194/1‑148 (MQ=255)

                                                                        aaCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCGTGGGGGTCGAGCGCCACGCTCGGGCGCa                                                                         >  2:4767321/1‑150 (MQ=255)

                                                                          ccTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGc                                                                       <  1:10943521/150‑1 (MQ=255)

                                                                                ccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGAACCCCCACCCAAAACCCCCCCCGGGTGA‑GGGGGCC‑GGGCGTGGCGTTTTGGTAGTGCGCCGCGCGCGGGCGCAGccgtgga                                                                 >  2:5156144/1‑145 (MQ=255)

                                                                                ccGCTGCTAACCGCAATAGCTGCGGCTTGAGGGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCACTCCCGCACGCGGGCGA‑GGGGGCC‑CGGCGGGCCATGTGGGTGGAGCGCCCCGCTCGGGCGCAGCCgggca                                                                 >  2:8270014/1‑148 (MQ=255)

                                                                                 cGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCCACCCACAACCCCACGCGGGAGT‑GGGGGGC‑GGGCGTGGCGGGTGGGGGGAGCGCCACGCACGGGCGCAGccgtgaaa                                                                >  1:7074065/1‑144 (MQ=255)

                                                                                  gctgctAACCGCACTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACg                                                               <  2:5317710/150‑1 (MQ=255)

                                                                                  gctgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACg                                                               <  2:6030182/150‑1 (MQ=255)

                                                                                   ctgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCCCACCCCCAACCACGCCCGCACCCCGGGGG‑GGGGGGC‑GGGCGGGGCGGGTGGGGGGGGCGCCGCGCGCGGGCGCCGCCGGGGAccg                                                              >  2:9211816/1‑148 (MQ=255)

                                                                                    agctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGAt                                                             <  2:232002/149‑1 (MQ=255)

                                                                                       tAACCGCACTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTc                                                          <  1:2211663/150‑1 (MQ=255)

                                                                                       tAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGACTGTGGTGTTGGCCCTCACCCCAACCCACTGCCGCACGCGGGTGA‑GGGGGGC‑GGGGGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCAGGAACGgtgtg                                                          >  2:10255491/1‑149 (MQ=255)

                                                                                       tAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTTGCCCACACCCCCACCCCCAACCCCACCCGGGCGA‑GGGGGGC‑CGGCGGGGCGTTTTGGGCGAGCGCCACGCTCGGGCGCACCCAGGGACCGTGTc                                                          >  2:8461879/1‑150 (MQ=255)

                                                                                       tAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTc                                                          <  2:7552273/150‑1 (MQ=255)

                                                                                          ccGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCCCAACCCCAACCACAACCCCCCCCGGGGGA‑GGGGGGC‑GGGCGGGGCGGGGGGGGGGAGCGCCACGCACGGGCGCCGCCAGGAAAGAAGtgaaa                                                       >  1:1799373/1‑146 (MQ=255)

                                                                                            gCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCAAACCACACCCCCCCCCCGGAGA‑GGGGGCC‑GGGCGGGCCGGGTGGGTCGTGCGCCACGCACGGGCGCCGCCGGGTACGATggaaagcc                                                     >  2:4544154/1‑143 (MQ=255)

                                                                                            gCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTAccc                                                     <  2:7167723/150‑1 (MQ=255)

                                                                                               aTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACTCCCGCCCGCCGGAGA‑GGGGGCC‑GGGCGTGCCAGGTGGGGCGAGCGCCACGCGCGGGCGCAGCCAGGGACCATGTCTACCCAcc                                                  >  2:9054898/1‑150 (MQ=255)

                                                                                                tAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTccc                                                 <  2:10083340/150‑1 (MQ=255)

                                                                                                tAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTccc                                                 <  1:5325069/150‑1 (MQ=255)

                                                                                                 aGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTcccc                                                <  2:6854190/150‑1 (MQ=255)

                                                                                                    tGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAg                                             <  2:7401890/150‑1 (MQ=255)

                                                                                                    tGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAg                                             <  1:46270/150‑1 (MQ=255)

                                                                                                    tGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAg                                             <  2:10947099/150‑1 (MQ=255)

                                                                                                    tGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAAGGTGGTGTTGGGCCTCACCCCAAACCACACCCCCCCGCGGGAGT‑GGGGGGC‑GGGGGTGGCGTGTTGGGCGGGCGCCTCGCGCGGGCGCAGCCAGGGACCTTGTGTAGCCACCCCGAg                                             >  2:1577713/1‑150 (MQ=255)

                                                                                                    tGCGGCTGTAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGTGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAg                                             <  1:3705560/150‑1 (MQ=255)

                                                                                                     gCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAACCACAACCGCACCCGGGAGT‑GGGGGGC‑GGGCGGGCCGTGTGGGGCGAGCGCCGCGCGCGGGCGCCGCCAGGGACGCAGTGTTCCCACCCCAAgg                                            >  1:8653225/1‑150 (MQ=255)

                                                                                                      cGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCCCCCCCAACCACGACCGCACGCCGGGGG‑GGGGGCC‑GGGCGTGGCCTGTGGGTGGAGCGCCACGCGCCGGCGCCGCCAGGCACGAAGTCTTACCCCCCCAAGGc                                           >  1:7851610/1‑150 (MQ=255)

                                                                                                       ggCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAAACCACTCCCCCACGCGGGGGG‑GGGGGCC‑GGGCGTGGCGTGTGGGTGGAGCGCCGCCGGCGGGCGCAACCGGGGAAGATGTATACCCACCCCAAGGcc                                          >  1:1286211/1‑150 (MQ=255)

                                                                                                        gCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGccc                                         <  1:8830735/150‑1 (MQ=255)

                                                                                                            gAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCggg                                     <  1:6536508/150‑1 (MQ=255)

                                                                                                              gtgtCGCGGATCGTTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGTTGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTa                                   <  1:7505128/150‑1 (MQ=255)

                                                                                                              gtgtCGCGGATCGGATAATGGAATGTGGAGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCATGAGGGTCGCGCGCCTCGCTCGGGCGCAGCCGGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTa                                   <  2:8718383/150‑1 (MQ=255)

                                                                                                               tgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTAt                                  <  1:4407765/150‑1 (MQ=255)

                                                                                                                    cgGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGa                            <  1:3424313/150‑1 (MQ=255)

                                                                                                                      gATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAAt                          <  2:3348309/150‑1 (MQ=255)

                                                                                                                       aTCGGTTTTTGGAATGTGGTGTTCGCCCTCACCCCCACCCTCTACCCCAAGCGGGAGA‑GGGGGCC‑GGGCGTGCCGTGTGGGTCGAGCGCCTCGCGCGGGCGCACCCTGGGACGATGTCTAACCACCCCGATGGCCCGGGGATC‑TGGTAtt                         >  2:2263194/1‑150 (MQ=255)

                                                                                                                         cGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCg                       <  1:10260173/150‑1 (MQ=255)

                                                                                                                          ggTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGCGT‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCAGGGTATC‑TGGAATTCgg                      <  1:2744570/150‑1 (MQ=255)

                                                                                                                           gTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCAAACCCGCACCCGGGAGA‑GGGGGGC‑CGGCGTGCCAGGTGGGTCGAGCGCCACCCTCGGGCGCCTCCGGGAACGATGTCAACCCACACCAAGGCCCCCGGGATCGTGGAAtaggc                      >  2:6359898/1‑146 (MQ=255)

                                                                                                                             ttttGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGccc                   <  2:9437138/150‑1 (MQ=255)

                                                                                                                               ttGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGccccc                 <  1:6398810/150‑1 (MQ=255)

                                                                                                                               ttGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGccccc                 <  1:1429564/150‑1 (MQ=255)

                                                                                                                               ttGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGccccc                 <  1:10528442/150‑1 (MQ=255)

                                                                                                                                tGGAATGTGGTGTTGGCCCTCACCCCCACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGCCccca                <  1:3010058/150‑1 (MQ=255)

                                                                                                                                          tgtTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGTGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGCCCCCAGCCCAGGCac      <  2:4167259/150‑2 (MQ=255)

                                                                                                                                          tgtTGGCCCTCACCCCAACCCTCTCCCCCACGCGGGCGA‑GGGGGCC‑GGGCGTGCCGGGGGGGTCGAGCGCCTCGCTCGGGGGCAGCCTGGAACGATGTCTACCCGCCCCTAGGCCCCGGGTATC‑GGGAATTCGGCCCCCAGCCCCGGCaa      >  2:1311421/1‑150 (MQ=255)

                                                                                                                                            ttGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGCCCCCAGCCCAGGCAAcc    <  2:5081343/150‑1 (MQ=255)

                                                                                                                                              ggCCCTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGCCCCCAGCCCAGGCAACCaa  <  2:289680/150‑1 (MQ=255)

ATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGA‑GGGGGCC‑GGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATC‑TGGAATTCGGCCCCCAGCCCAGGCAACCAA  >  NC_008463/3515717‑3516008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`