| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,341,704 | Δ1 bp | pseudogene (664/957 nt) | PA14_RS10890 → | DUF58 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,341,702 | 0 | C | . | 98.9% | 2220.4 / 12.9 | 458 | pseudogene (662/957 nt) | PA14_RS10890 | DUF58 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (3/2); new base . (226/226); total (230/228) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 471 total aligned reads displayed.
AGCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTGGGCC > NC_008463/2341551‑2341851 | cTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccag > 1:4422739/1‑149 (MQ=255) gggTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccagcc < 1:471125/151‑5 (MQ=255) gTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCTCGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCgg < 1:10177182/151‑1 (MQ=255) gTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCgg < 2:6228691/151‑1 (MQ=255) tCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCggg < 1:9693671/151‑1 (MQ=255) ggccTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTTCCAGGGACTGCGCGCCTA‑CCAGCCGGGCg > 1:6072935/3‑151 (MQ=255) agcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcg < 1:3324552/151‑1 (MQ=255) agcagGAGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGTGCGCGAGCTGGCGAGCACGGGCGTCGACGACTACCAGCGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcg > 2:722706/1‑151 (MQ=255) agGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcggcg > 2:9563790/1‑151 (MQ=255) gcgcTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGTGCGCGGAGGATGCCGAGTACCTGGGGCGCGCGCTGGCGAGCTCGGTCGTCGACGACTAACAGGGAATGCGCGCCTA‑CCAGCCGGTCGACTCGCTGCGGCGcc < 2:1489775/151‑1 (MQ=255) gcgcTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGcc < 2:7882140/151‑1 (MQ=255) tGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCa > 1:7020836/1‑151 (MQ=255) ggTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCCGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTCCCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCAc < 2:5982255/151‑1 (MQ=255) tCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTg < 2:10211618/151‑1 (MQ=255) cTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACAgg > 1:3479953/1‑151 (MQ=255) tACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGa > 2:6886128/1‑151 (MQ=255) aCCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGaa < 2:8590307/151‑1 (MQ=255) cccTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAg < 2:5780271/151‑1 (MQ=255) ccTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGAACAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACGCGCGGCGGCGCCTGCAGTGGAAgg > 1:9965794/1‑151 (MQ=255) cTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGAGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGc < 1:6575337/151‑1 (MQ=255) tCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCg > 2:5277001/1‑151 (MQ=255) ggCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtt > 1:8487162/1‑151 (MQ=255) ggCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtt > 1:9878049/1‑151 (MQ=255) ccGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtttt > 1:10602576/1‑151 (MQ=255) cGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTc < 2:2596889/151‑1 (MQ=255) gCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTcc < 2:2512476/151‑1 (MQ=255) cTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTccc > 1:7578048/1‑151 (MQ=255) cTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGAGGCGCCTGCACTGGAAGGCGTTTTccc > 2:557130/1‑151 (MQ=255) tGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCg > 2:2016417/1‑151 (MQ=255) tGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCg > 1:1710686/1‑151 (MQ=255) ggCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGt < 1:1158688/151‑1 (MQ=255) ggCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGcc < 2:1148472/151‑1 (MQ=255) ggCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGcc > 1:4256564/1‑151 (MQ=255) cgagccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAg < 2:8704470/147‑1 (MQ=255) gagccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAgg > 2:10355349/4‑151 (MQ=255) gccGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAgggg > 2:6657127/2‑151 (MQ=255) cTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCT‑CCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTgg > 2:5160962/1‑151 (MQ=255) tCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGt > 2:926441/1‑151 (MQ=255) cgcgCCGGGCGCGGAGGCTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTg < 2:373628/151‑1 (MQ=255) cgcCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGaa > 1:1828092/1‑151 (MQ=255) gcCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAg > 2:7328515/1‑151 (MQ=255) cgcgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTc < 1:4865833/151‑1 (MQ=255) cgcgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTc < 2:1130295/151‑1 (MQ=255) cgcgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTc < 1:520102/151‑1 (MQ=255) cgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgc > 2:4953242/1‑151 (MQ=255) cgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgc < 1:5050317/151‑1 (MQ=255) cgGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgc > 2:2968310/1‑151 (MQ=255) ggaggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgcc > 2:1640420/1‑151 (MQ=255) ggaggaTGCCGACGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgcc < 2:4527099/151‑1 (MQ=255) gaggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgccg < 1:1451084/151‑1 (MQ=255) gaggaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCAAGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCC‑GCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTcgccg > 2:4278789/1‑151 (MQ=255) gaTGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCgcgc > 1:2285393/1‑151 (MQ=255) tGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTc < 1:8897697/151‑1 (MQ=255) ccGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcgg > 2:8313690/1‑151 (MQ=255) cGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcggc > 1:5610801/1‑151 (MQ=255) cGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcggc < 1:925599/151‑1 (MQ=255) gAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcggcg < 2:9841186/151‑1 (MQ=255) gAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGATTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTcggcg < 1:125373/151‑1 (MQ=255) cAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAg < 2:1788119/151‑1 (MQ=255) gggCGCGCGCGGGCGAGCACGGGCGTCGACGACGACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGAcc < 1:6480319/151‑1 (MQ=255) cgcgcgcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCtgt > 1:3889383/1‑151 (MQ=255) cgcgcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTgg < 2:8938991/151‑1 (MQ=255) cgcgcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTgg > 1:9487020/1‑151 (MQ=255) gcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTg < 2:10705634/151‑1 (MQ=255) gcTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTg > 1:2995541/1‑151 (MQ=255) tGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGACGACCTGTGGCTGGa > 2:6102182/1‑151 (MQ=255) gCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAAt < 1:5772322/151‑1 (MQ=255) cGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAAtt < 1:7652835/151‑1 (MQ=255) cGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAAtt < 1:7962130/151‑1 (MQ=255) cGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTCGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACATGTGGCTGGAAtt > 1:7452158/1‑151 (MQ=255) gAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTc < 2:4152150/151‑1 (MQ=255) aGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCg > 1:5327442/1‑151 (MQ=255) aCGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAgc < 2:4750201/151‑1 (MQ=255) gCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCt < 1:2863484/151‑1 (MQ=255) cGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTc < 2:7994712/151‑1 (MQ=255) cGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTc > 1:6255705/1‑151 (MQ=255) gTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTcg < 2:8450846/151‑1 (MQ=255) gTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTcg > 2:3450153/1‑151 (MQ=255) gTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTcg > 2:2688129/1‑151 (MQ=255) gTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTcg > 2:6821256/1‑151 (MQ=255) cgacgaCTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTcggc > 1:9119824/1‑151 (MQ=255) cgacTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCCGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCggg > 2:5071597/1‑151 (MQ=255) cTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAt > 2:762962/1‑151 (MQ=255) cTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAt > 2:358937/1‑151 (MQ=255) aCCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAtct < 2:233092/151‑1 (MQ=255) aCCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACGTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAtct < 1:2559400/151‑1 (MQ=255) ccAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAtctc < 1:5901142/151‑1 (MQ=255) ccAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGAtctc < 1:2039815/151‑1 (MQ=255) cAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCg < 2:815113/151‑1 (MQ=255) aGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGa > 1:7350579/1‑151 (MQ=255) aGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGa < 2:1311604/151‑1 (MQ=255) gggACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGaa < 1:8154268/151‑1 (MQ=255) ggACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGACGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGaaa > 2:3986354/1‑151 (MQ=255) cTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTc < 2:6746435/151‑1 (MQ=255) cTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTc < 2:10289667/151‑1 (MQ=255) tGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCg > 2:3169747/1‑151 (MQ=255) cgcCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGACTTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTg > 2:1047947/1‑151 (MQ=255) cgcCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTg < 1:8738857/151‑1 (MQ=255) gcCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTgg > 1:10000413/1‑151 (MQ=255) tcccAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGACGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTGGGcc < 2:5328675/150‑1 (MQ=255) | AGCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCAGGGGCTGCTGGTGAAGGACTTCGCCGCGCTCGGCGGGGAAGACCTGTGGCTGGAATTCGAGCGCCTCGGCGGGGATCTCGAAAGTCGCCTGGGCC > NC_008463/2341551‑2341851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |