New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_008463 3175697 =311 (0.630)491 (1.100) 227/274 0.0 64.6% intergenic (+390/+106) PA14_RS30505/PA14_RS14515 hypothetical protein/hypothetical protein
?NC_008463 = 3177289 255 (0.570)intergenic (‑69/‑218) PA14_RS14525/PA14_RS14530 hypothetical protein/Tn3 family transposase

Only 100 of 899 total aligned reads displayed.

TTCATTGTCAGTCACCTCATTCAAGGACTTGTCATGAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGTACGAATGTCCGA  >  NC_008463/3175547‑3175847
                                                                                                                                                      |                                                                                                                                                      
    ttGTCAGTCACCTCATTCAATGACTTGTCATGAAGACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTa                                                                                                                                                    <  2:8437089/151‑1 (MQ=255)
    ggatcgcgagacggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTa                                                                                                                                                    >  1:9752613‑M1/147‑151 (MQ=255)
    ggatcgcgagacggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTa                                                                                                                                                    >  1:7592992‑M1/147‑151 (MQ=255)
     tGTCAGTCACCTCATTCAAGGACTTGTCATGAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTAt                                                                                                                                                   >  2:5325508/1‑151 (MQ=255)
     tGTCAGTCACCTCATTCAAGGACTTGTCATGAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTAt                                                                                                                                                   >  2:5460343/1‑151 (MQ=255)
     gatcgcgagacggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTAt                                                                                                                                                   <  1:5616784‑M1/6‑1 (MQ=255)
      gtcagtcaCCTCATTCAAGGACTTGTCATGAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATg                                                                                                                                                  >  2:4294153/1‑151 (MQ=255)
      atcgcgagacggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCCTTATg                                                                                                                                                  <  1:299308‑M1/7‑1 (MQ=255)
      atcgcgagacggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATg                                                                                                                                                  <  1:100633‑M1/7‑1 (MQ=255)
         gcgagacggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggctctcgcataatcggccctttgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGa                                                                                                                                               >  1:5928987‑M1/142‑151 (MQ=255)
          cgagacggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGaa                                                                                                                                              >  1:8472282‑M1/141‑151 (MQ=255)
          cgagacggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGaa                                                                                                                                              >  2:6512433‑M1/141‑151 (MQ=255)
          cgagacggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggacaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGaa                                                                                                                                              >  1:791600‑M1/141‑151 (MQ=255)
                ggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTa                                                                                                                                        <  2:1688194‑M1/17‑1 (MQ=255)
                ggcgcgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTa                                                                                                                                        <  2:5634099‑M1/17‑1 (MQ=255)
                    cgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtgtggtccgggcggcgctcaacattaggccgtgCATTATGCGAAGCCTTAAGCa                                                                                                                                    <  1:3277019‑M1/21‑1 (MQ=255)
                    cgtacagcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataaacggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCa                                                                                                                                    >  1:9883299‑M1/131‑151 (MQ=255)
                     cAAGGACTTGTCATGAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCAt                                                                                                                                   >  2:7043368/1‑151 (MQ=255)
                     cAAGGACTTGTCATGAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCAt                                                                                                                                   >  2:6810603/1‑151 (MQ=255)
                       acagcgtcgcttgtacgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcacggagccgccgtattgtccgggcggcgctcaccatacggccgagCATTATGCGAAGCCTTAAGCAttt                                                                                                                                 <  2:329117‑M1/24‑1 (MQ=255)
                       aGGACTTGTCATGAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCAttt                                                                                                                                 >  2:4984151/1‑151 (MQ=255)
                         agcgtcgcttgatcgatcagatgctgggggacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgcggtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTcc                                                                                                                               <  2:2450322‑M1/26‑1 (MQ=255)
                          gcgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCa                                                                                                                              >  1:8029700‑M1/125‑151 (MQ=255)
                           cgtcgcttgatcgatcagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAg                                                                                                                             <  1:3495731‑M1/28‑1 (MQ=255)
                                 ttgatcgatcagaggctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagcctccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGcc                                                                                                                       >  2:5714052‑M1/118‑151 (MQ=255)
                                  tGAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCa                                                                                                                      >  1:8648723/1‑151 (MQ=255)
                                   gAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAg                                                                                                                     <  1:5832430/151‑1 (MQ=255)
                                        cGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATcc                                                                                                                >  2:1878400/1‑151 (MQ=255)
                                          cagttgctgctggactgggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGACGCCTTAAGCTTTTCCAGGCGGCCAGGATCCAc                                                                                                              >  2:8822059‑M1/109‑151 (MQ=255)
                                          cagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCAc                                                                                                              >  2:6274408‑M1/109‑151 (MQ=255)
                                          cagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCAc                                                                                                              >  1:5113730‑M1/109‑151 (MQ=255)
                                          cagatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCAc                                                                                                              <  1:4987166‑M1/43‑1 (MQ=255)
                                            gatgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGa                                                                                                            >  1:8284500‑M1/107‑151 (MQ=255)
                                             atgctgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGaa                                                                                                           <  2:10113969‑M1/46‑1 (MQ=255)
                                                 tgcggtacagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAAc                                                                                                       >  1:4257547‑M1/102‑151 (MQ=255)
                                                   gCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAAccc                                                                                                     >  1:2566217/1‑151 (MQ=255)
                                                        cagggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGgag                                                                                                <  2:2772075‑M1/57‑1 (MQ=255)
                                                         agggagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGgaga                                                                                               >  2:69651‑M1/94‑151 (MQ=255)
                                                            gagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCg                                                                                            >  2:10252055‑M1/91‑151 (MQ=255)
                                                            gagagggtcaggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATGATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCg                                                                                            >  1:4007923‑M1/91‑151 (MQ=255)
                                                                gTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGctct                                                                                        <  2:9616285/151‑1 (MQ=255)
                                                                gTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGctct                                                                                        >  2:10506558/1‑151 (MQ=255)
                                                                     aggcttgcgcataatcggccctatgttacgcgccgcccggcgccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCgg                                                                                   >  1:897489‑M1/82‑151 (MQ=255)
                                                                      ggcttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATGTCCCGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCggg                                                                                  <  2:1224000‑M1/71‑1 (MQ=255)
                                                                         ttgcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGtt                                                                               <  1:5387010‑M1/74‑1 (MQ=255)
                                                                           gcgcataatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTc                                                                             >  2:7141219‑M1/76‑151 (MQ=255)
                                                                               gggTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTg                                                                         >  1:1806780/1‑151 (MQ=255)
                                                                               gggTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTg                                                                         >  2:2975884/1‑151 (MQ=255)
                                                                                taatcggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGc                                                                        >  1:7750252‑M1/71‑151 (MQ=255)
                                                                                    cggccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAATCCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTc                                                                    <  1:7455032‑M1/85‑1 (MQ=255)
                                                                                      gccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTa                                                                  >  1:9337520‑M1/65‑151 (MQ=255)
                                                                                      gccctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTa                                                                  <  1:7260584‑M1/87‑1 (MQ=255)
                                                                                         ctatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGcc                                                               >  2:442512‑M1/62‑151 (MQ=255)
                                                                                          tatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCa                                                              <  2:9225429‑M1/91‑1 (MQ=255)
                                                                                          tatgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATGTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCa                                                              >  2:7568562‑M1/61‑151 (MQ=255)
                                                                                          aTCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATCCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGAGCGCTCTCCCGGGGTTTCCTTGCTTTCTCGCCa                                                              >  2:4075818/1‑151 (MQ=255)
                                                                                          aTCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCa                                                              >  2:2595698/1‑151 (MQ=255)
                                                                                            tgttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCACGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGt                                                            >  1:10398170‑M1/59‑151 (MQ=255)
                                                                                            cAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGt                                                            >  1:6673016/1‑151 (MQ=255)
                                                                                            cAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGt                                                            >  2:1065926/1‑151 (MQ=255)
                                                                                              ttacgcgccgcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAATACCCCGGAGATCGCGCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGa                                                          <  2:9832182‑M1/95‑1 (MQ=255)
                                                                                                 tCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATCTACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCTGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGc                                                       <  2:7754430/151‑1 (MQ=255)
                                                                                                   ttACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCt                                                     >  1:1433421/1‑151 (MQ=255)
                                                                                                       gcccggagccgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATc                                                 <  1:4648603‑M1/104‑1 (MQ=255)
                                                                                                             cATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAg                                           >  1:6867534/1‑151 (MQ=255)
                                                                                                               tGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTc                                         >  1:6398209/1‑151 (MQ=255)
                                                                                                                gAACATTTCTGACATAGCATCTGGTTTAACATAATATACATGATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTcc                                        <  2:5120380/151‑1 (MQ=255)
                                                                                                                cgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTcc                                        <  1:10271921‑M1/113‑1 (MQ=255)
                                                                                                                cgccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTcc                                        <  2:8000795‑M1/113‑1 (MQ=255)
                                                                                                                 gccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCa                                       >  2:9373983‑M1/38‑151 (MQ=255)
                                                                                                                 gccgtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCa                                       <  2:8977444‑M1/114‑1 (MQ=255)
                                                                                                                    gtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCAccc                                    >  2:2075026‑M1/35‑151 (MQ=255)
                                                                                                                    gtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCAccc                                    >  2:861057‑M1/35‑151 (MQ=255)
                                                                                                                    gtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCAccc                                    <  1:3615592‑M1/117‑1 (MQ=255)
                                                                                                                    gtattgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCAccc                                    >  1:615591‑M1/35‑151 (MQ=255)
                                                                                                                       ttgtccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGAt                                 >  1:8889853‑M1/32‑151 (MQ=255)
                                                                                                                         tGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGc                               >  2:597561/1‑151 (MQ=255)
                                                                                                                           ccgggcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCtt                             <  1:3842489‑M1/124‑1 (MQ=255)
                                                                                                                              tAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCaa                          >  1:2304537/1‑151 (MQ=255)
                                                                                                                               gcggcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAac                         >  2:4693217‑M1/24‑151 (MQ=255)
                                                                                                                                  gcgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACAcc                      >  1:3108820‑M1/21‑151 (MQ=255)
                                                                                                                                   tCTGGTTTAACATACTATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACAccc                     <  2:8224989/151‑1 (MQ=255)
                                                                                                                                   cgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACAccc                     <  2:3760246‑M1/132‑1 (MQ=255)
                                                                                                                                   cgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACAccc                     >  1:166211‑M1/20‑151 (MQ=255)
                                                                                                                                   cgctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACAccc                     <  1:1911249‑M1/132‑1 (MQ=255)
                                                                                                                                    gctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTGCAACACCCg                    <  1:9562154‑M1/133‑1 (MQ=255)
                                                                                                                                     ctcaacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGc                   >  2:4823706‑M1/18‑151 (MQ=255)
                                                                                                                                      ggTTTAACATAATATACATTATGCGTAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAATAGCCCGGAGAGGGCTCTCCCGGGGTTTCCTTGCGTTCTTGCCCGTGAAGCCTTATCGGGTAGTCCACCCGTGGCTGCAACGCCCGCa                  >  2:2234521/1‑151 (MQ=255)
                                                                                                                                      acaccataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTTTCGGTTAGTCCACCCGATGCTTCAACACCCGCa                  >  1:9129838‑M1/17‑151 (MQ=255)
                                                                                                                                        aacataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAAc                >  2:5831495‑M1/15‑151 (MQ=255)
                                                                                                                                         ttAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCACCACCCGCAACg               <  2:1523323/151‑1 (MQ=255)
                                                                                                                                         acataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACg               <  1:2098053‑M1/138‑1 (MQ=255)
                                                                                                                                          cataaggccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGt              <  1:4849605‑M1/139‑1 (MQ=255)
                                                                                                                                               taataTACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGATGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGTACGaa         <  1:10744039/151‑1 (MQ=255)
                                                                                                                                                 ccgagCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGTACGAATg       <  1:1216695‑M1/146‑1 (MQ=255)
                                                                                                                                                  tataCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGTACGAATGt      <  1:7024990/151‑1 (MQ=255)
                                                                                                                                                    taCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGTACGAATGTcc    <  2:3523269/151‑1 (MQ=255)
                                                                                                                                                    taCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGTACGAATGTcc    <  1:10515214/151‑1 (MQ=255)
                                                                                                                                                     gCATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGTACGAATGTCCg   <  1:4394788‑M1/150‑1 (MQ=255)
                                                                                                                                                      CATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGTACGAATGTCCGa  <  1:2769353‑M1/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
TTCATTGTCAGTCACCTCATTCAAGGACTTGTCATGAACACGAAGGACATGGCCCGTTGAGAGAGTGGACGCCAGAAGCGGGTTTGTCGAATCAGTGTCTTACAAGGCTCATGAACATTTCTGACATAGCATCTGGTTTAACATAATATACATTATGCGAAGCCTTAAGCATTTCCAGGCGGCCAGGATCCACGAAAAACCCCGGAGATCGCTCTACCGGGGTTTCCTTGCTTTCTAGCCAGTGAAGCCTTATCGGTTAGTCCACCCGATGCTTCAACACCCGCAACGTACGAATGTCCGA  >  NC_008463/3175547‑3175847

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.