Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 3,515,863 T→C intergenic (+617/+267) PA14_RS16005 → / ← PA14_RS16010 AAA family ATPase/DUF4354 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084633,515,8630TC99.4% 1147.1 / NA 306intergenic (+617/+267)PA14_RS16005/PA14_RS16010AAA family ATPase/DUF4354 family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (119/185);  minor base A (2/0);  total (121/185)
Fisher's exact test for biased strand distribution p-value = 1.56e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 308 total aligned reads displayed.

GTATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAA  >  NC_008463/3515715‑3516010
                                                                                                                                                     |                                                                                                                                                   
  ataCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAc                                                                                                                                                 <  2:9739530/151‑1 (MQ=255)
    aCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAccc                                                                                                                                               >  1:8801235/1‑151 (MQ=255)
     cAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAcccc                                                                                                                                              <  1:1915593/151‑1 (MQ=255)
     cAGCCCCTCCCTAAGCCATAGCCCTTCCCCAGACCTGAACGGCAAACCTATTGCCACCCGCAAACCCCCAACCTCCCCCTCTGCTAACCGCATTATCTGCGGCTTGTGTGTCGCGGAGCGGTTTTTGGAATGTGGTGTTGGCCCCCAcccc                                                                                                                                              <  2:3845232/151‑1 (MQ=255)
       gCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGGGTTGGCCCTCAccccca                                                                                                                                            >  2:5707495/1‑149 (MQ=255)
       gCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTGGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCAccccca                                                                                                                                            >  1:4909442/1‑149 (MQ=255)
          cctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAccc                                                                                                                                         <  1:7947838/151‑1 (MQ=255)
            tccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCctc                                                                                                                                       <  2:767874/151‑1 (MQ=255)
             ccctAAGCCAGAGCCCTTCCCCATACCTGATCGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTATCCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCctct                                                                                                                                      <  2:1372923/151‑1 (MQ=255)
               ctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTTGCCCGCCACCCAAcccacaac                                                                                                                                    >  2:4454976/1‑146 (MQ=255)
                tAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCACCCACAccc                                                                                                                                   >  1:8012648/1‑151 (MQ=255)
                tAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACTccc                                                                                                                                   >  2:8554168/1‑151 (MQ=255)
                 aaGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGACTGTGGTGTTGGCCCGCACCCCCACCCTCTaccc                                                                                                                                  >  2:5266842/1‑150 (MQ=255)
                 aaGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCg                                                                                                                                  <  1:6966654/151‑1 (MQ=255)
                   gCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCTCTCCCGCa                                                                                                                                >  2:6586511/1‑151 (MQ=255)
                        aGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCgg                                                                                                                           <  1:173560/151‑1 (MQ=255)
                        aGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCCACCCACTCCCGCACCCgg                                                                                                                           >  1:10346798/1‑151 (MQ=255)
                         gCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCggg                                                                                                                          <  2:5826784/151‑1 (MQ=255)
                          cccTTCCCCAGACCTGAACGGCACACCTATTGCCACCCGCAAAACCCCAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGga                                                                                                                         <  2:6636634/151‑1 (MQ=255)
                           ccTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACTCCCGCACGCGGgag                                                                                                                        >  2:10504349/1‑151 (MQ=255)
                             ttCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACACCCCCACCCGGGagag                                                                                                                      >  2:3204151/1‑151 (MQ=255)
                              tCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAgg                                                                                                                     <  2:10092886/151‑1 (MQ=255)
                              tCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAgg                                                                                                                     <  2:6015862/151‑1 (MQ=255)
                                  cATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACCACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGc                                                                                                                 <  2:688424/151‑1 (MQ=255)
                                  cATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCACAACCCCACCCGGGGGAGGGGGc                                                                                                                 >  1:10694280/1‑151 (MQ=255)
                                     aCCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCgg                                                                                                              <  2:8632488/151‑1 (MQ=255)
                                        tGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTGTTGGAATGTGGTGTTGGGCCTCACCCCAACCCTCTACCGCACGCGGGAGTGGGGGCCggggg                                                                                                           >  2:418158/1‑149 (MQ=255)
                                             ggCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAACCCGCTCCCCCCCCCGGGGGGGGGGGGCGGGCGTggcg                                                                                                      >  1:6422676/1‑148 (MQ=255)
                                                 cacCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGATTGAGTGTCGCGGATCGGTTTTTTGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGTGAGAGGGGGCCGGGCGTGCCTtgtg                                                                                                  <  2:10707721/151‑1 (MQ=255)
                                                   ccTATTGCCACCCGCAAAACCACACCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTggg                                                                                                <  1:5449275/151‑1 (MQ=255)
                                                   ccTATTGCCACCCGCAAAACCACACCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTggg                                                                                                <  2:2469106/151‑1 (MQ=255)
                                                    cTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCCCGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGt                                                                                               <  1:2850517/151‑1 (MQ=255)
                                                    cTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAACCCAAAACCGCACGCCGGAGAGGGGGCCGGGCGTGCCATGTGGGt                                                                                               >  2:6796378/1‑151 (MQ=255)
                                                     tATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCGCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGGCTTGTGGGTc                                                                                              >  2:9399760/1‑151 (MQ=255)
                                                       ttGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAACCCACAACCCCCCGCGGGGGAGGGGGGGGGGGGTGGCGTGTGGGtggg                                                                                            >  1:7831535/1‑148 (MQ=255)
                                                       ttGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGa                                                                                            <  2:3143325/151‑1 (MQ=255)
                                                         gCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAgc                                                                                          <  1:6878949/151‑1 (MQ=255)
                                                         gCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAgc                                                                                          <  2:8907203/151‑1 (MQ=255)
                                                            aCCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAACCCCAACCCAAAACCCCCAGCGGGAGAGGGGGGCGGGCGTGCCGTGGTGGGAGAGCGcc                                                                                       >  2:737255/1‑151 (MQ=255)
                                                             cccGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCCCCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCct                                                                                      <  1:1501795/151‑1 (MQ=255)
                                                                 cAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGAACCCCCAACCAAACCCCCCCGCCGCTGAGGGGGCCGGGCGGGGCGTGGGGGGCGGGCGCcacgct                                                                                  >  1:7110193/1‑151 (MQ=255)
                                                                  aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctc                                                                                 <  1:2553231/151‑1 (MQ=255)
                                                                  aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctc                                                                                 <  2:9251336/151‑1 (MQ=255)
                                                                  aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAACCCCAACCCACAACCCCCCCCGGGCGAGGGGGGCGCGGGTGCCGTGTGGGTGCAGCGCcccgcac                                                                                 >  2:9130156/1‑149 (MQ=255)
                                                                   aaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCGTGTGGGTCGCGCGCcacgctcg                                                                                >  2:2136036/1‑151 (MQ=255)
                                                                    aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCgg                                                                               <  1:9783538/151‑1 (MQ=255)
                                                                      ccACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGgc                                                                             <  1:3580099/151‑1 (MQ=255)
                                                                      ccACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGgc                                                                             <  2:5506138/151‑1 (MQ=255)
                                                                            ccTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCTGATCGGTTTTTGGACTGTGGTGTTGGGCATAACACCAAAACTCTAACTCACGCGGGAGTGGGGGCCGGGCCTGCCATGTGGGTCGAGCGCCTCGCGCGGGGGCAGcc                                                                       >  2:9529094/1‑151 (MQ=255)
                                                                            ccTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCCACCCGCTACCCCACGCCGGCGCGGGGGGCCGGCGTGCCGTGTGGGTCGCGCGCCGCGCGCGGGCGCGGcc                                                                       >  2:8167935/1‑151 (MQ=255)
                                                                             cTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCt                                                                      <  1:4471891/151‑1 (MQ=255)
                                                                              tCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACCCCCCAACCCCCTCCCCCCCCCCGGGGAGGGGGGCGGGGGGGCCGGGTGGGGGGAGGGCCACGCGGGGGGgccgccag                                                                     >  1:6704156/1‑149 (MQ=255)
                                                                               cccccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCAAACCCCCACCCACTCCCCGACCCGGGCGGGGGGGGCGCGCGGGCCGTGTGGGTGGAGGGCCTCGCGCGGgcgccccctcg                                                                    >  1:2091227/1‑144 (MQ=255)
                                                                                  ccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCACACCCGCAACCGGGAGAGGGGGGCGGGCGTGCCTTGTGGGTCGCGCGCCACGCACGGGCGCAGCCAGGGAc                                                                 >  2:2321081/1‑151 (MQ=255)
                                                                                    gctgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGa                                                               <  1:2297138/151‑1 (MQ=255)
                                                                                    gctgctAACCGCAATAGCTGCGGATTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGa                                                               <  1:392164/151‑1 (MQ=255)
                                                                                     ctgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGAt                                                              <  2:7177359/151‑1 (MQ=255)
                                                                                      tgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATg                                                             <  1:574115/151‑1 (MQ=255)
                                                                                       gctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAACCCACTACCCCACCCGGGAGAGGGGGCCGGGCGGGCCTTGTGGGTGGAGCGCCGCGCTCGGGCGCCCCCGGGAACGATga                                                            >  1:5903115/1‑150 (MQ=255)
                                                                                        ctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTc                                                           <  1:123833/151‑1 (MQ=255)
                                                                                        ctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTc                                                           <  2:3422500/151‑1 (MQ=255)
                                                                                        ctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAACCCTCACCCGCCCGCCGGGGAGGGGGCCGGGCGAGCCGTGTGGGGCGTGCGCCTCGCGCGGGCGCCGGCGGGAACGATGTc                                                           >  2:3472320/1‑151 (MQ=255)
                                                                                         tAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCt                                                          <  2:6457358/151‑1 (MQ=255)
                                                                                          aaCCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACCACCCCAACCCCACCCCCAACCCGGGGGGGGGGGCGGGCGGGGCGTGTGGGGGGAGCGCCACGCACGGGCGCCGCCGGGAACgctttgta                                                         >  1:4188487/1‑144 (MQ=255)
                                                                                           aCCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTAc                                                        <  1:6109842/151‑1 (MQ=255)
                                                                                            ccGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTAACCCCAACCCAATCCCGCAAGCGGGAGTGGGGGGCGGGCGGGGCAGGTGGGTGGAGCGCCTCGCTAGGGGGGACCCGGGAACGATGTGTaac                                                       >  1:9606606/1‑149 (MQ=255)
                                                                                            ccGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTAcc                                                       <  1:8264525/151‑1 (MQ=255)
                                                                                            ccGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTAca                                                       <  2:4351413/151‑2 (MQ=255)
                                                                                              gCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCt                                                     <  1:9337493/151‑1 (MQ=255)
                                                                                               cattAGCTGCGGCTTGAGTGTCGCGGATGGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCCACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTc                                                    <  2:8349280/148‑1 (MQ=255)
                                                                                               cAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTc                                                    <  2:2895752/151‑1 (MQ=255)
                                                                                                 aTAGCTGCGTCTTGAGTGTCGCGGATCGGTGTTTGGAATGTGGGGTTGGCACACACCCCAAACCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGACTCGCTCGGGCGCAGCCTGGAACGATGTCGACCCTccc                                                  <  2:8484697/151‑1 (MQ=255)
                                                                                                 aTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTccc                                                  <  1:10245615/151‑1 (MQ=255)
                                                                                                  tAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTcccc                                                 <  2:363324/151‑1 (MQ=255)
                                                                                                   aGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCt                                                <  2:4796404/151‑1 (MQ=255)
                                                                                                    gCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTa                                               <  1:10019968/151‑1 (MQ=255)
                                                                                                     cTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCAAAACCCCACCCGGGAGAGGGGGGCGGGCGGGGCATGTGGGTGGGGCCCCCCGCACGGGCGCAGCCGGGAACGATTTCTACCCACCCCAAg                                              >  2:10641060/1‑151 (MQ=255)
                                                                                                      tGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACAACCCAAACCACTACCCCACGCCGGAGAGGGGGGGGGGCGGGGCTTGTGGGTGGATCGCCACGCTCGGGGGGAGCCGGGTAAGATGTGTACACAccccgatg                                             >  1:7471248/1‑147 (MQ=255)
                                                                                                      tGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAgg                                             <  1:9893827/151‑1 (MQ=255)
                                                                                                        cGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGcc                                           <  2:1021104/151‑1 (MQ=255)
                                                                                                         ggCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAAACCACACCCGCCCGCCGGGGAGGGGGCCGGGCGTGGCTTGTGGGTCGAGCGCCGCGCACGGGCGCAGCCGGGAACGAAGTCTAACCACCCCAATGccc                                          >  2:355187/1‑151 (MQ=255)
                                                                                                          gCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGcccc                                         <  2:8092141/151‑1 (MQ=255)
                                                                                                           cTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCg                                        <  2:3380513/151‑1 (MQ=255)
                                                                                                           cTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCCACCCACACCCGCCCGCGGGAGCGGGGGCCGGGCGGGCCGTGGGGGGCGAGCCCCACGCGCGGGCGCCGCCTGGGACGATGTCTAACCCCCCCAAGGCCCCg                                        >  2:6310473/1‑151 (MQ=255)
                                                                                                            ttGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCgg                                       <  1:5206022/151‑1 (MQ=255)
                                                                                                             tGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCggg                                      <  1:10750829/151‑1 (MQ=255)
                                                                                                                gtgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTAt                                   <  2:5565477/151‑1 (MQ=255)
                                                                                                                gtgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTAt                                   <  2:4909442/151‑1 (MQ=255)
                                                                                                                   tCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTg                                <  2:7891548/151‑1 (MQ=255)
                                                                                                                       ggATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAAt                            <  1:8960030/151‑1 (MQ=255)
                                                                                                                         aTCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTc                          <  1:3094714/151‑1 (MQ=255)
                                                                                                                          tcggagtttGGAATGTGGTGTTGGCCCTCCCCCCCACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCg                         <  2:3010367/145‑1 (MQ=255)
                                                                                                                          tCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGTGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCg                         <  1:6022715/151‑1 (MQ=255)
                                                                                                                            ggTTTTTGGAATGTGGTGTTGGCCCACACCCCAAACCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGGGCCGTGTGGGTCGAGCGCCTCGCGCGGGGGCAGCCGGGAACGATGTGTACCCTACCCAAGGCCCCGGGTATCTGGAATTAGGc                       >  2:4082232/1‑151 (MQ=255)
                                                                                                                                 ttGGAATGTGGTGTTGGCACTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCccca                  <  2:3355845/151‑1 (MQ=255)
                                                                                                                                    gAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagcc               <  2:4585766/151‑1 (MQ=255)
                                                                                                                                           gtgtTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCaa        <  2:6163667/151‑1 (MQ=255)
                                                                                                                                             gtTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAAcc      <  1:3308079/151‑1 (MQ=255)
                                                                                                                                              ttGGCCCACACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGCATTAGGCCCCCAGCCCAGGCAACCa     >  1:6639304/1‑151 (MQ=255)
                                                                                                                                                  gCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCaaaa  <  1:9421415/151‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GTATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAA  >  NC_008463/3515715‑3516010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: