| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 966,217 | T→C | intergenic (+77/‑568) | PA14_RS04485 → / → PA14_RS04490 | fimbrial protein/response regulator transcription factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 966,217 | 0 | T | C | 99.8% | 1853.7 / NA | 474 | intergenic (+77/‑568) | PA14_RS04485/PA14_RS04490 | fimbrial protein/response regulator transcription factor |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (196/277); minor base A (0/1); total (196/278) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 476 total aligned reads displayed.
ATCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTTGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGG > NC_008463/966069‑966364 | cGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTCCCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGa < 1:7223054/151‑1 (MQ=255) gcgcGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAg < 2:2655191/151‑1 (MQ=255) gcgGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCGTTCGCGCCAGCCCTCGCGAAGGc > 1:2995655/1‑151 (MQ=255) gAGGGCGAATTGAAGCCCGGGGTCGCCGACGGCGCCGCCGAGTTCCCGTTTCCCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTCTCCCGCCCCGCCCCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCg < 1:108167/151‑1 (MQ=255) aGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCgg < 2:7604724/151‑1 (MQ=255) cGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGcccc < 2:8297881/151‑1 (MQ=255) gAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCt > 2:7175077/1‑151 (MQ=255) gAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCt > 1:1772146/1‑151 (MQ=255) gAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCt < 1:8042119/151‑1 (MQ=255) aaGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTc > 2:3529292/1‑151 (MQ=255) ccGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGt > 2:3080093/1‑151 (MQ=255) cGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTg < 1:8512189/151‑1 (MQ=255) cGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTg < 1:6620451/151‑1 (MQ=255) ggggTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAgggg > 1:954832/1‑151 (MQ=255) ggggTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTgg > 1:9340379/1‑151 (MQ=255) ggggTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTgg < 1:8315860/151‑1 (MQ=255) gggTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGt < 1:596693/151‑1 (MQ=255) gCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAg > 1:7928108/1‑151 (MQ=255) gCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAg < 2:24052/151‑1 (MQ=255) cGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCacaa > 2:9828572/1‑148 (MQ=255) gACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATc < 1:8688328/151‑1 (MQ=255) cGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGc > 2:8693103/1‑151 (MQ=255) cGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGc < 1:2717225/151‑1 (MQ=255) ggCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGAGATAGcc > 1:6343033/1‑151 (MQ=255) ggCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGcc < 1:1996825/151‑1 (MQ=255) gcgcCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCg > 2:7897332/1‑151 (MQ=255) cgccgcCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGa < 1:9039291/151‑1 (MQ=255) gccgccGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGaa < 1:3806389/151‑1 (MQ=255) cgAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGgcgc > 2:5766948/1‑151 (MQ=255) gAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGct < 2:2036204/151‑1 (MQ=255) gAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGct > 2:6936802/1‑151 (MQ=255) aGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCCGTGGTTGCCGATAGCCGAAGgcgcgc > 1:3941113/1‑149 (MQ=255) aGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGctc < 1:1425969/151‑1 (MQ=255) gTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCCGATCGCCGAAGGCGctct > 2:10671425/1‑151 (MQ=255) cccGTTGACCTTCCCCCGCGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGCAGGCGCTCTGCa < 1:1468418/149‑1 (MQ=255) cACGTTTCCCTACCCCTGAGCGGCGCCGCCGCACTGGCCCCCGCGTGTCCCGCCCCGCCTCGGGAAGCGCCGACGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCCGTGGTTGCAGATCGCCGAAGGCGCTCTGCa < 2:3395945/151‑1 (MQ=255) cACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGCTCGCCGAAGGCGCGCGGCa > 1:4630860/1‑151 (MQ=255) cACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCGCTGCa > 2:10560894/1‑151 (MQ=255) aCGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGcct > 2:4107498/1‑149 (MQ=255) cGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCata > 1:9617504/1‑151 (MQ=255) cGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGCCGAAGGCGCGCTGCaaa > 1:2850800/1‑149 (MQ=255) gtccaCCTTCCCCTGAGCGGCGCCGCCGCACGTTCCCCGGCGTGTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCatat < 1:6048887/147‑1 (MQ=255) tttACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATc > 2:2979583/1‑151 (MQ=255) ttACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGGACATCGCCCAAGGCGCTCTGCatatag > 1:8186207/1‑149 (MQ=255) ttACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCg < 1:9187135/151‑1 (MQ=255) tACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATccc > 2:6316574/1‑149 (MQ=255) aCCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCt < 1:5107491/151‑1 (MQ=255) aCCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCt < 2:5139404/151‑1 (MQ=255) cTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTcc < 1:4238112/151‑1 (MQ=255) ttCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCCGATAGCCGCAGGCGCGCAGCAAATAGCGCCg > 1:10036869/1‑151 (MQ=255) ttCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCg < 2:8106121/151‑1 (MQ=255) tCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCgc > 2:10192776/1‑151 (MQ=255) ccccTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGCCGTACGCGCTCTGCATATCGCGCCgct > 2:5532181/1‑151 (MQ=255) cccTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATAGCTCCgcgg > 1:2559260/1‑149 (MQ=255) tGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCATTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTc < 2:258545/151‑1 (MQ=255) gAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCg < 2:10297423/151‑1 (MQ=255) ggcgCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCCGATAGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTccg > 2:9160973/1‑150 (MQ=255) ggcgCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCt < 2:7027769/151‑1 (MQ=255) ggcgCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGCCGACTGGGCTCTGCCTATCGCTCCGCTGCTCGTccg > 2:36172/1‑150 (MQ=255) gcgcCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCACTGCATATCGCTCCGCTGCTCGTccag > 2:1224675/1‑149 (MQ=255) gccgccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTggg < 1:10245161/151‑1 (MQ=255) ccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtctc < 2:9389647/151‑1 (MQ=255) ccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtctc < 1:5756275/151‑1 (MQ=255) ccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtctc < 2:10410965/151‑1 (MQ=255) ccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtctc < 2:4966334/151‑1 (MQ=255) cgcTCTTTCCCCGGCGTGTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCg < 1:9467465/151‑1 (MQ=255) tctTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTgc < 2:6587788/151‑1 (MQ=255) cccGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATAGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACAt > 2:1710982/1‑151 (MQ=255) ccGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATg < 2:4748112/151‑1 (MQ=255) ccGGCGTGTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATg < 2:6734494/151‑1 (MQ=255) cGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGc < 2:7288550/151‑1 (MQ=255) cGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCAt < 1:70684/151‑1 (MQ=255) gTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCAtt < 2:2885192/151‑1 (MQ=255) tttCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTc < 2:6810301/151‑1 (MQ=255) ttCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCGCTGCATATCGCTCCGCTGCTCGGCCTGGGTCTCGTGCGCACATGcacttac > 2:2100666/1‑145 (MQ=255) cgccccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTGCCGCa > 2:7758511/1‑151 (MQ=255) ccccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGAACGCCCAAGGCGCTCTGCAAATCGCACCGCTGCTCGTCCTGGGTCTCGTGCGCCCAAGCCCGTACCGCAcg > 1:4920622/1‑151 (MQ=255) cccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCAcgc < 1:5409829/151‑1 (MQ=255) gccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGACCAAGGCGCTCTGCATATCGCTCCGCTGCACGTACTGGGTCTCGTGCGCACATGACAATCCCGCACGCGGa > 2:4021062/1‑151 (MQ=255) ccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGCCGAATGCGCTCTGGATATAGCTCCGCTGCTCGTCCGGGGTCTCGTGCGCCCAAGCCCATACCGCACGCGGaa > 1:10611196/1‑151 (MQ=255) tCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATa < 2:7347105/151‑1 (MQ=255) ggAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGAACGCCGAAGGCGCTAAGCATATCGCTACGCTGCTCGTCCTGGGTCTCGTGCGCACAAGCCATTACCGCACGCGGAATACCg > 2:986967/1‑151 (MQ=255) aaGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGat < 1:6823444/151‑1 (MQ=255) aaGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCAGTCCCGCACGCGGAATACCGat < 2:2321696/151‑1 (MQ=255) aGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGata < 2:9617504/151‑1 (MQ=255) aGCGCCGTCGGCCGCTTTCGAGCCTGCCCTCTCGTAGGCTCGGCCCCTCACCTCCAGTGGTTTCAGATCGCCGATGGCGCTATTCTTATCGCTCCGCTGCTCGTCCTGTGTTTCGTGCTCACATGCCTTTCCAGCACGCTGAATACCGata < 2:6137849/151‑1 (MQ=255) aGCGCCGGCGGCCGCCCTCGCGCCACCCCTCGCGAAGGCTCCCCCCCTCACCTCCAGTGGAGGCACATCGCCGCAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCAGGGTCTCGTGCGCACATGCCAGTCCCGCACGCGGAATACCGata < 2:10026808/151‑1 (MQ=255) gTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGt < 2:1582403/151‑1 (MQ=255) gTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGt < 2:4473625/151‑1 (MQ=255) tCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTa < 1:1872217/151‑1 (MQ=255) cGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCCGTGGTTGCAGATCGCCGCAGGCGCTCTGCATTTCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACTTGCCATTCCCGCACGCGGAATACCGATATTGCGAATGGGc < 2:4314434/151‑1 (MQ=255) gCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCg < 1:2288986/151‑1 (MQ=255) tttCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGaa < 1:7679712/151‑1 (MQ=255) gtCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAg < 2:5303592/150‑1 (MQ=255) tCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCCTATCGCTCCGCGGCTCGTCCTGGGTCTCGGGCGCACATGCCCTTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAgg > 1:6083243/1‑151 (MQ=255) tCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAgg < 1:3330713/151‑1 (MQ=255) tCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAgg < 1:10457574/151‑1 (MQ=255) cccTCGCGAAGGCTCGGCCCCTCACCACCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAg < 2:1843615/151‑1 (MQ=255) ccTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAgg < 1:9906264/151‑1 (MQ=255) ccTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACAAGCCATTCCCGCACGCGGAAAACCGATATTGCGGATGGGCGAAGGCGTTCTGAgg > 2:3217383/1‑151 (MQ=255) | ATCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTTGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGG > NC_008463/966069‑966364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |