| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 3,909,637 | (G)5→4 | intergenic (‑133/+14) | PA14_RS17840 ← / ← brnQ | DUF599 domain‑containing protein/branched‑chain amino acid transport system II carrier protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 3,909,633 | 0 | G | . | 97.8% | 2101.8 / 35.0 | 446 | intergenic (‑129/+18) | PA14_RS17840/brnQ | DUF599 domain‑containing protein/branched‑chain amino acid transport system II carrier protein |
| Reads supporting (aligned to +/- strand): ref base G (6/4); new base . (218/217); total (224/222) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 467 total aligned reads displayed.
AAATGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTGGGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCGG > NC_008463/3909483‑3909779 | tGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTgggg > 1:9155714/1‑151 (MQ=255) gCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCAGGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggt > 2:3809232/1‑150 (MQ=255) ccGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggtt > 1:879205/1‑149 (MQ=255) cGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggttc > 1:10005684/1‑148 (MQ=255) gAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggttcg < 1:789585/151‑5 (MQ=255) aggtCGGCGGTCATCAAAACTCCCTCATGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGc < 1:10347315/148‑1 (MQ=255) gTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTGGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGACCAGGCCACCACTGTCGTCCGCGCAGGAAAAAGTCCGCCCGGCGGCGGCCTTCCT‑GGGGTTCGcc > 2:3564266/1‑151 (MQ=255) cggcggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTGTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGa < 2:4650842/151‑1 (MQ=255) ggcggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGAc < 2:5078970/151‑1 (MQ=255) gTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGtct < 1:8575174/151‑1 (MQ=255) cATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCa > 1:7670739/1‑151 (MQ=255) tGAACACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAgg < 2:4085423/151‑1 (MQ=255) tGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAgg < 2:9793126/151‑1 (MQ=255) gAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGc > 1:693676/1‑151 (MQ=255) cTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCg > 1:3943605/1‑151 (MQ=255) cccTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCt > 1:9435956/1‑151 (MQ=255) tctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcg > 2:7354189/1‑151 (MQ=255) ctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgc < 2:8891397/151‑1 (MQ=255) tGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgcgc < 1:3466562/151‑1 (MQ=255) tGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCAGGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgcgc > 2:10071851/1‑151 (MQ=255) gAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgcgcg > 2:805906/1‑151 (MQ=255) gAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTGTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgcgcg < 2:2254206/151‑1 (MQ=255) aGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCgg > 1:2344563/1‑151 (MQ=255) ccggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCt > 2:1422347/1‑151 (MQ=255) ccggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCt < 1:6816316/151‑1 (MQ=255) cggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCtt > 1:2796835/1‑151 (MQ=255) ggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTg > 2:1864758/1‑151 (MQ=255) cggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACGTTCGGCGGCTCATGAAAAAGGCCGCCCGGTGGCGGCCTTCC‑GGGGGGGCGCCTGACGGCTCAGGCGACCGCTTCGCGCGGCGTGccc > 2:9426544/1‑151 (MQ=255) gAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagc > 1:829623/1‑151 (MQ=255) gAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCAGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagc > 2:4173084/1‑151 (MQ=255) actCGCCCCGCCGTTGTATCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagca < 2:10389169/149‑1 (MQ=255) aaTCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagca > 2:9115533/1‑151 (MQ=255) aaTCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagca < 2:4781803/151‑1 (MQ=255) cGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGcc < 2:1989353/151‑1 (MQ=255) cGCCCCGCCGTTGTGTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAACAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCGGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGcc < 2:1634963/151‑1 (MQ=255) cccGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGAt > 2:3454869/1‑151 (MQ=255) ccgccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATc < 2:1048586/151‑1 (MQ=255) ccgccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTGCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATc < 1:9322997/151‑1 (MQ=255) cgccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCg < 1:6306305/151‑1 (MQ=255) ccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCa < 1:416826/151‑1 (MQ=255) gttgttTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCaaa < 2:6586846/151‑1 (MQ=255) cttgtggcgcgCCGATCGGACGCCGCTCGCCGCGGCCAGGACACGACTTACGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTGCGCCTGCCGTCTCACGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCaaa < 2:7959600/144‑1 (MQ=255) ttgttTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAAc > 2:7395763/1‑151 (MQ=255) ttgtgTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAAc < 2:8392333/151‑1 (MQ=255) tgttTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACg < 1:156028/151‑1 (MQ=255) tCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTg < 1:7805452/151‑1 (MQ=255) cgcgCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGc > 1:1497093/1‑151 (MQ=255) cgcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCa < 1:9865192/151‑1 (MQ=255) gcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAg > 2:6046848/1‑151 (MQ=255) gcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAg < 2:5393174/151‑1 (MQ=255) gcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAg > 2:720061/1‑151 (MQ=255) cGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGa < 2:6151523/151‑1 (MQ=255) tGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCa < 2:2781896/151‑1 (MQ=255) gggACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCACATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAg < 2:694006/151‑1 (MQ=255) gccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCaa > 2:7622646/1‑151 (MQ=255) cgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATg < 2:8661423/151‑1 (MQ=255) ccgcGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATAcc > 1:1184743/1‑151 (MQ=255) cgctGCCAGGACACGACTTTCGTCGGCTAATGAAATAGGCCGCCCGGAGGCGGCCTTCCT‑GGTGTTCGCCTGACGTCTCAGGCGCCCGATTCGCGCGGCTTGCCCAGCCGCCGATCGCAAACGTCTGCCTGGACCAGCGCAATGGATACCg < 2:5273741/151‑1 (MQ=255) cgcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCg < 1:4331804/151‑1 (MQ=255) cgcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCg > 2:3064574/1‑151 (MQ=255) cgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgc < 2:3715144/151‑1 (MQ=255) ggCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCNTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGAGCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCCGGACCAGCGCAATGGATACCGgca > 1:5682996/1‑151 (MQ=255) ggCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgca > 1:6504788/1‑151 (MQ=255) ggCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgca > 1:6685517/1‑151 (MQ=255) ggCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgca < 1:7232116/151‑1 (MQ=255) gCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgcag < 1:4752941/151‑1 (MQ=255) ccAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgcagc < 2:4468534/151‑1 (MQ=255) aGGACCCGACTTTCGTCGGCTCATGAAAACGCCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGcagcag < 1:5418781/151‑1 (MQ=255) ggACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCagcagc > 2:568315/1‑151 (MQ=255) acacGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagcca < 1:6171668/151‑1 (MQ=255) cacGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagccag > 1:8393362/1‑151 (MQ=255) acGACTTTCGTCGGCTCAGGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCACTGGATACCGGCAGcagccagc < 2:10704271/151‑1 (MQ=255) cGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCagccagcc > 1:4525041/1‑151 (MQ=255) cGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCagccagcc < 1:1064539/151‑1 (MQ=255) gACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAgccagcca > 1:2021146/1‑151 (MQ=255) aCTTTCGTCGGCTCATGAAATAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCaa > 2:10846111/1‑151 (MQ=255) cTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAg < 1:558188/151‑1 (MQ=255) cgtcgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCTGCCAGCCATGGctc > 2:5853532/1‑151 (MQ=255) cgtcgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGcta > 2:6333130/1‑150 (MQ=255) gtcgGCTCAGGAAAAAGGCCGCCCGGAGGCGGCCTTCAT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGAGCGCAAACGACTGGCCGGACCAGCGCAAGGGATGCCGGCCGCAGCCAGCCCAGGctcg > 2:5571057/1‑150 (MQ=255) cgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGa > 1:1885108/1‑151 (MQ=255) gCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATc > 1:3306595/1‑151 (MQ=255) cTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCg > 1:7540821/1‑151 (MQ=255) cTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCg > 2:10668065/1‑151 (MQ=255) cATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGc > 1:10110477/1‑151 (MQ=255) tGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGa < 1:551506/151‑1 (MQ=255) gAAAATGGCCGCCCTGAGGCGGCCTTCCT‑GGGTTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAg < 2:4329750/151‑1 (MQ=255) aaaaaGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGAAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGc < 1:1304674/151‑1 (MQ=255) gccgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGc < 1:3116414/151‑1 (MQ=255) ccgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCt > 1:6103282/1‑151 (MQ=255) cgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCtt > 2:3251421/1‑151 (MQ=255) cgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCtt > 1:5003270/1‑151 (MQ=255) cccGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTgg < 2:7000129/151‑1 (MQ=255) ccGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGc > 2:9247110/1‑151 (MQ=255) ccGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTACGCGCGGCTTGCCCAGCAGCCGATCGCAAACGCCTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGc < 2:2653113/151‑1 (MQ=255) cGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGAAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCg > 2:9892237/1‑151 (MQ=255) gcggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGAc < 2:2075458/151‑1 (MQ=255) cggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACg < 1:2074588/151‑1 (MQ=255) ccTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTcc > 1:2928409/1‑151 (MQ=255) cTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCg > 1:7064485/1‑151 (MQ=255) | AAATGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTGGGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCGG > NC_008463/3909483‑3909779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |