| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,341,611 | Δ1 bp | pseudogene (571/957 nt) | PA14_RS10890 → | DUF58 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,341,609 | 0 | C | . | 99.7% | 1932.4 / ‑3.6 | 390 | pseudogene (569/957 nt) | PA14_RS10890 | DUF58 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (216/173); minor base T (0/1); total (216/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 404 total aligned reads displayed.
CTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCA > NC_008463/2341458‑2341756 | ctgctgTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGc > 2:4990118/1‑151 (MQ=255) gctgGTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGccg < 2:7483309/151‑2 (MQ=255) ctgTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGccgt < 1:2041484/151‑3 (MQ=255) tgTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGccgtt > 1:1508890/1‑148 (MQ=255) gTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGccgttc < 1:7705906/151‑5 (MQ=255) ccACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTc < 2:10153417/151‑1 (MQ=255) ccACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTc > 2:3898650/1‑151 (MQ=255) ccACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCAGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTTCCCACGGCCGCAGGCCGGCGAG‑CCGTTCCTc > 1:2907777/1‑151 (MQ=255) aCCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTcgc > 1:8892523/1‑151 (MQ=255) aCCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTcgc > 2:8302459/1‑151 (MQ=255) accgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGTGCTGGGTCGTCCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTAGcggcgg > 1:8123055/1‑151 (MQ=255) ccgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCGGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCACGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCggg > 1:1027622/1‑151 (MQ=255) cgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGgc > 2:2754230/1‑151 (MQ=255) cgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCGCGCGCCGGgc < 2:7942184/151‑1 (MQ=255) gaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGgcg < 1:425202/151‑1 (MQ=255) aGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCGGGAGCGGGGTCGACCTGCG‑CCAGCCGGCGCTGGTCTACCCTCGGCCGGGGGCCGGCGAG‑CCGTTCCTCGCGCCGGgcgc > 2:1976582/1‑151 (MQ=255) gACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCggg > 1:1242882/1‑150 (MQ=255) gACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCgga > 2:10437456/1‑151 (MQ=255) gACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCGGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCGGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCgga > 2:5931302/1‑151 (MQ=255) gACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCGGCGGGTGGCCGGGAGCTGGGTCGTCCTGCG‑CCAGCAGGGGCGGGTCTACCCTCGGCCGGTGGGCGGCGAG‑CCGGTCCGCGCGCCGGGGGCggg > 1:8215866/1‑150 (MQ=255) ggctggctGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATg < 1:9387599/151‑1 (MQ=255) ctggctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGcc < 2:9266369/151‑1 (MQ=255) gctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAg > 2:3686449/1‑151 (MQ=255) gctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAg < 1:1986503/151‑1 (MQ=255) tgCGGCCGGGGCGCCAGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGCCCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGa < 2:1911277/151‑1 (MQ=255) ggCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCa > 1:7622676/1‑151 (MQ=255) ggCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCa > 2:1139341/1‑151 (MQ=255) ggCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTACTCGCGCCGGGCGCGGAGGATGCCGAGGACCa > 2:735067/1‑151 (MQ=255) ccGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAgg > 2:2955213/1‑151 (MQ=255) ccGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCGGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCAGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAgg > 2:2511942/1‑151 (MQ=255) cGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAggg > 1:8580436/1‑151 (MQ=255) ggggCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAgggg > 2:5218025/1‑151 (MQ=255) gggCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGgc < 2:1493878/151‑1 (MQ=255) ggCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGgcg > 2:10379852/1‑151 (MQ=255) ggCGCCTGCGGGTGGAGAGTCGCTTTCCCCACGGCCTGCTGGTGGCCAGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCGGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATTCCGAGGCCCACGGgcg > 2:6371651/1‑151 (MQ=255) gcCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGgcgcgc > 2:9507921/1‑151 (MQ=255) ccTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGgcgcgcg < 1:3682597/151‑1 (MQ=255) ccTGCGGGTGGAGAGGCGCTTTCCCCTCGCCCTGCTGGTGGCCTGGAGCTGGGTCGACCAGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCAGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGgcgcgcg < 2:4924887/151‑1 (MQ=255) tGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCAGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCt > 1:8389936/1‑151 (MQ=255) cGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCGGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCCCTGGCCGGCGAG‑CCGTTCGTCGCGCCCGGCGCGGTGGATGCCGAGGTCCAGGGGCGCGCGCTgg > 1:9105013/1‑151 (MQ=255) gggTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGCCCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGc < 1:2631203/151‑1 (MQ=255) gggTGGAGAGTCGCTTTACCCTCGGCCTGCTGGTGGCCTAGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCAGGTATACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGc > 2:4014122/1‑151 (MQ=255) tGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAg > 1:5236197/1‑151 (MQ=255) gagaGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCACGGCCGCTGGCCGGCGAG‑CCGTTACTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCa > 1:5667925/1‑151 (MQ=255) gagTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACg < 1:7045623/151‑1 (MQ=255) gTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACggg > 2:9823952/1‑151 (MQ=255) ctgtCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTc < 2:8731435/148‑1 (MQ=255) tttCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCTGGGGCGCGCGCTGGCGAGCACGGGCGTcg > 2:9045034/1‑151 (MQ=255) tttCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTcg < 1:5565978/151‑1 (MQ=255) gtCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTcga > 1:1917069/2‑151 (MQ=255) cTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACt < 2:8430465/151‑1 (MQ=255) ctgctgGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAgg > 1:9855400/1‑151 (MQ=255) tgctgGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAggg < 1:4810108/151‑1 (MQ=255) gctgGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGa < 1:1005352/151‑1 (MQ=255) aggtggCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGAcg > 2:4841361/2‑150 (MQ=255) ggtggCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTg < 2:4113693/151‑1 (MQ=255) cTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGcc > 1:4635886/1‑151 (MQ=255) tGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCt < 1:4180136/151‑1 (MQ=255) ggAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTa < 1:211817/151‑1 (MQ=255) gAGCTGGGTCGACCTGCGCCC‑GCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCGGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCGAc > 2:450606/1‑151 (MQ=255) cTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccag > 2:7234398/1‑149 (MQ=255) gTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCgg > 2:8186263/1‑151 (MQ=255) tCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGCCTGCGCGCCTA‑CCAGCCggg > 2:10606717/1‑151 (MQ=255) gACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCg > 2:6873375/1‑151 (MQ=255) gACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCg > 1:3848000/1‑151 (MQ=255) gACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCg > 1:3951708/1‑151 (MQ=255) gACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCg > 1:1378225/1‑151 (MQ=255) aCCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGa < 2:1085406/151‑1 (MQ=255) cTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCGGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCCGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACt < 1:2416168/151‑1 (MQ=255) tgcgccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGCCGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGtctc > 2:8843844/5‑151 (MQ=255) cgccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTcgc > 1:4434193/3‑151 (MQ=255) cgccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTcgc < 2:2424947/149‑1 (MQ=255) cgccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTcgc > 1:3584965/3‑151 (MQ=255) gccAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCCCGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTcgcg > 1:4021309/2‑151 (MQ=255) cagcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggc > 2:5154011/1‑151 (MQ=255) cagcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggc < 2:5684080/151‑1 (MQ=255) agcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCCGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcg > 2:6537317/1‑151 (MQ=255) agcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcg > 1:7897995/1‑151 (MQ=255) cagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCCCGGGCGTCGACGTCTCCCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcggc > 1:5185532/1‑151 (MQ=255) cagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcggc > 1:6199699/1‑151 (MQ=255) agGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcggcg > 1:1602594/1‑151 (MQ=255) ggCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGgcgc > 1:5936478/1‑151 (MQ=255) cTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGc < 1:6401154/151‑1 (MQ=255) ggTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCAc > 2:3264859/1‑151 (MQ=255) gTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACt < 1:5069958/151‑1 (MQ=255) tACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGa > 2:439129/1‑151 (MQ=255) aCCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGATCGAGGGAGCCGACCGATGCCAGCGAGTGCGCGCGTACCC‑GGCGGCAGCCTCCCGGCGGCGCCGGCACTGGag > 2:164227/1‑150 (MQ=255) aCCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGaa > 1:10032406/1‑151 (MQ=255) cTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGc > 2:5428007/1‑151 (MQ=255) ggCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtt < 2:7173257/151‑1 (MQ=255) gCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGttt < 1:2254393/151‑1 (MQ=255) gCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGttt < 2:2340776/151‑1 (MQ=255) gCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGttt > 2:9305576/1‑151 (MQ=255) ccGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtttt > 1:1044256/1‑151 (MQ=255) ccGCTCGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGCCTGCGCGCCGA‑CCAGCCGGGCGACACGCGGCGGCGCCTGCACGGGAAGGCGtttt > 1:6735551/1‑151 (MQ=255) cGCTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTc < 1:7176931/151‑1 (MQ=255) gCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTcc > 1:3411688/1‑151 (MQ=255) cTGGCCGGCGAG‑CCGGTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTccc < 1:10863544/151‑1 (MQ=255) ggCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGTGCAAGGGAGACGACCGCTACCAGGGACTGCGCGCCT‑CCCACCCGTGAGGCTCGGGGAGGCGCCTGCACTGGACGTCGTTAACCCGAGGcc > 2:224200/1‑151 (MQ=255) gCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCa > 2:6086988/1‑151 (MQ=255) | CTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCA > NC_008463/2341458‑2341756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |