Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084634,616,4390CG26.9% 251.5 / 36.2 149intergenic (‑159/+43)hda/PA14_RS21180DnaA regulatory inactivator Hda/DUF2066 domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (58/51);  new base G (40/0);  total (98/51)
Fisher's exact test for biased strand distribution p-value = 2.06e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 163 total aligned reads displayed.

GGGCGGACAATCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGGCGCGCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAA  >  NC_008463/4616289‑4616589
                                                                                                                                                      |                                                                                                                                                           
gggCGGACAATCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTcgcgc                                                                                                                                                             <  2:4582188/151‑1 (MQ=255)
 ggCGGACAATCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTcgcgcg                                                                                                                                                            >  2:9492295/1‑151 (MQ=255)
   cGGACACTCCGAAAACGCCGCAGGAGTCACCGTAACGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATCCGCACCTAGGCAAGCAAAATCACAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGcc                                                                                                                                                          <  2:2020588/151‑1 (MQ=255)
     gACAATCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCgg                                                                                                                                                        <  1:3295621/151‑1 (MQ=255)
      aCAATCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAATGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCggg                                                                                                                                                       >  1:9264564/1‑150 (MQ=255)
        aaTCCGAAAACGCCGCAGGAGTCACCGTACAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑ccc                                                                                                                                                    <  2:4329884/151‑1 (MQ=255)
        aaTCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑ccc                                                                                                                                                    >  1:4433603/1‑151 (MQ=255)
        aaTCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑ccc                                                                                                                                                    <  1:824295/151‑1 (MQ=255)
         aTCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGcccgggcg                                                                                                                                                    >  1:1222367/1‑145 (MQ=255)
         aTCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCg                                                                                                                                                   <  1:5925828/151‑1 (MQ=255)
           ccGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGGccg‑cccgcg                                                                                                                                                 >  2:2864957/1‑150 (MQ=255)
             gAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑cccccgcc                                                                                                                                               >  1:9404252/1‑146 (MQ=255)
             gAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑Tcc                                                                                                                                              <  2:8983235/151‑1 (MQ=255)
              aaaaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATCCGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGGCCG‑CCCGC‑GCC‑g                                                                                                                                            >  1:10423892/1‑151 (MQ=255)
                aaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑Gtt                                                                                                                                          <  1:2551731/151‑1 (MQ=255)
                  cgccgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCCAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGc                                                                                                                                        <  2:8434926/151‑1 (MQ=255)
                  cgccgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGc                                                                                                                                        <  1:125796/151‑1 (MQ=255)
                  cgccgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGc                                                                                                                                        <  2:5930995/151‑1 (MQ=255)
                   gccgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑CCCGC‑CCC‑ggttca                                                                                                                                       >  1:8313480/1‑146 (MQ=255)
                    ccgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑GCCGC‑Gcccgtggct                                                                                                                                       >  2:1006457/1‑144 (MQ=255)
                      gcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑CCCGC‑TCC‑GTTTCA‑TAg                                                                                                                                   >  2:9387719/1‑151 (MQ=255)
                      gcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAg                                                                                                                                   <  1:5286288/151‑1 (MQ=255)
                        aGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGa                                                                                                                                 <  2:10657321/151‑1 (MQ=255)
                           aGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCg                                                                                                                              <  2:4386390/151‑1 (MQ=255)
                           aGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCg                                                                                                                              <  2:10860478/151‑1 (MQ=255)
                            gTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGGCGG‑CCCGC‑GCC‑GGTTCA‑TTTGAGCgg                                                                                                                             >  2:7207561/1‑151 (MQ=255)
                             tccccGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCACAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGa                                                                                                                            <  2:3466001/148‑1 (MQ=255)
                             tCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAACTCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGa                                                                                                                            <  1:5616618/151‑1 (MQ=255)
                             tCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGa                                                                                                                            <  1:5616560/151‑1 (MQ=255)
                              cACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑GCC‑GGTTAA‑AAGGAGCGGaa                                                                                                                           >  2:4817710/1‑150 (MQ=255)
                               aCCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATc                                                                                                                          <  1:4997170/151‑1 (MQ=255)
                               aCCGTAAAGGCTGCAAAGAGTATACGCCTCGGCAAGGCCGCACACTGAGCAACTAGGCAAGCAAAATCACAGGATTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATc                                                                                                                          <  2:709888/151‑1 (MQ=255)
                                ccGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCg                                                                                                                         <  2:10767121/151‑1 (MQ=255)
                                 cGTAAAGGCTGCAAAGTTTATACGCCGCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCgg                                                                                                                        <  2:654489/151‑1 (MQ=255)
                                 cGTAAAGGCTGCAAAGATTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCANAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCgg                                                                                                                        <  1:5688730/151‑1 (MQ=255)
                                  gTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCCG‑CCCGC‑CCC‑GGTTGA‑TAGGAGGGGATCggg                                                                                                                       >  1:7090361/1‑150 (MQ=255)
                                    aaaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGgcgc                                                                                                                     <  2:2567148/151‑1 (MQ=255)
                                    aaaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGgcgc                                                                                                                     <  1:6844827/151‑1 (MQ=255)
                                    aaaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GATGCC‑TAGGAGGGGATCGgcgg                                                                                                                     >  2:7890746/1‑150 (MQ=255)
                                    aaaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑CCCCC‑TCC‑CTTGCA‑GAGGAGCGGATCGgcgc                                                                                                                     >  2:8812154/1‑151 (MQ=255)
                                    aaaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCCCCCG‑CCCGC‑TGC‑CGTGCA‑AAGTAGCGGATGGgcgg                                                                                                                     >  2:10445694/1‑150 (MQ=255)
                                     aaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGGCGG‑CCCCCGCCC‑GTTGC‑‑TAGGGGCGGCTCGgcgcg                                                                                                                    >  2:7407035/1‑151 (MQ=255)
                                     aaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGgcgcg                                                                                                                    <  2:4330556/151‑1 (MQ=255)
                                     aaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑CCCCC‑GAC‑CGTGCA‑AATGAGCGGATCGgcgcg                                                                                                                    >  2:3834993/1‑151 (MQ=255)
                                     aaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑CCCCC‑CCC‑GGTGCA‑GTAGTGCGGATCGgcgcg                                                                                                                    >  2:3835030/1‑151 (MQ=255)
                                      aGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑GCC‑CGTGAA‑AATGAGCGGCTAGgcgcgc                                                                                                                   >  2:5538587/1‑151 (MQ=255)
                                        gCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCCG‑GCCCC‑CCC‑GGTTCA‑GAGGAGGGGATGCGCGCGCCg                                                                                                                 >  1:5766607/1‑151 (MQ=255)
                                        gCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑CCCCC‑GCC‑CGTGGA‑GAGGAGCGGATGGGGGCGccc                                                                                                                 >  1:634336/1‑150 (MQ=255)
                                         cTGCAAAGTGTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGGCGG‑CCCGC‑GCC‑GGGGGA‑AAGGTGCGGGTGCGCGCGCCgg                                                                                                                >  1:9476207/1‑150 (MQ=255)
                                            cAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCCG‑CCCGC‑ACC‑CGTGGA‑TAGGAGCGGCTCGGCGCGCCGAcac                                                                                                             >  1:7973928/1‑149 (MQ=255)
                                             aaaGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGGCGG‑GCCCC‑ACC‑CGTGCG‑GAGGTGCGGGTGGGCgcggcgccgca                                                                                                            >  1:3394634/1‑146 (MQ=255)
                                               aggttATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGC‑CCCCC‑GCC‑CGTGAC‑TAGGAGCGGAGAGGCGCGCCGACG‑CAca                                                                                                         >  1:1581213/4‑150 (MQ=255)
                                               aGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GGTGCA‑TAGGAGCGGATAGGCGCGCCGACT‑CAcg                                                                                                         >  2:6969444/1‑150 (MQ=255)
                                                  ttATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑GCC‑GTTGGC‑TAGGCGCGGATCCGCGCCCCCACT‑CACAGcc                                                                                                      >  2:8641094/1‑151 (MQ=255)
                                                    ataCGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGCGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑GCCGC‑TCC‑GGTGGA‑TAGGAGCGGATCGGCGCGCCGCCT‑CACGGCCAg                                                                                                    >  2:7891390/1‑151 (MQ=255)
                                                    ataCGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCCCGCCC‑GTGGCA‑‑AGGGGCGGCTAGGGGCGCCGACA‑CACAGCCac                                                                                                    >  1:6079490/1‑150 (MQ=255)
                                                    ataCGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCCC‑GAC‑GGTGGA‑TAGGGGCGGGTCGGCGCGCCGACA‑CACAGcccc                                                                                                    >  2:4049051/1‑149 (MQ=255)
                                                     taCGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑CCCCC‑GCC‑CGTGCC‑TAGGAGCGGGTCGGCGCCCCGACA‑CACAGCCacc                                                                                                   >  2:2793929/1‑149 (MQ=255)
                                                        gCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCCG‑CCCCC‑GCC‑CGTGGA‑TAGGTTCGGGTGGGCGCGCCGCCA‑CACAGCCACCggg                                                                                                >  1:5979676/1‑150 (MQ=255)
                                                         ccTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCCG‑CCCGC‑CCCGGTTGGA‑‑CGGAGCGGATGGGCGCGCCCCCG‑CACAGCCACCGGaa                                                                                               >  2:6371591/1‑151 (MQ=255)
                                                          cTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGGCCCCGC‑CCG‑GTTG‑A‑GAGGAGGGGGTAGGCGCGCCGACA‑AACAGCCCGCGGaaa                                                                                              >  2:3021693/1‑151 (MQ=255)
                                                           tCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑CCCGC‑GCC‑GGTGCG‑TAGGTGCGGGTCGGGGCGCCGACG‑CACAGGCACCGGgaaa                                                                                             >  2:7669099/1‑150 (MQ=255)
                                                           tCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GGTGGC‑TAGGAGCGGATGGGCGCGCCGACG‑CACTGCCAGCGGGAAt                                                                                             >  2:7669173/1‑151 (MQ=255)
                                                             ggCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑AGC‑GGTGGA‑GAGGAGCGGGTCGGCGCGCCGACG‑CACATCCACCGGAAAtta                                                                                           >  2:8687718/1‑150 (MQ=255)
                                                                 aGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGGCCG‑CCCGC‑GCC‑GGTGCG‑GAGGATCGGGTCGGGGCGCCCGCA‑CCCTGCCAGCGGAAAATCAGtt                                                                                       >  1:10752061/1‑151 (MQ=255)
                                                                   gCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGGCGG‑CCCGC‑GGC‑GTTGCA‑TTGGTGCGGCTGGGCGCGCCCGCG‑CACAGGCCGCCGAAATTGAGGTgg                                                                                     >  2:635735/1‑151 (MQ=255)
                                                                    ccGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGGCGG‑GCCGC‑GCC‑GGTGCA‑GAAGATCGGGTACGCGGCCCGACC‑CCCAGCCAACCGAAATTCAGGTggg                                                                                    >  2:566612/1‑151 (MQ=255)
                                                                       cacaATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GGTGCC‑TATGTGCGGGTGGGGGCGCCGACT‑AACAGCCAGCGGGACATCAGTTGGgaag                                                                                 >  2:10219499/1‑149 (MQ=255)
                                                                        acaATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑CCCCC‑GCC‑CGTGCA‑TAGGGGCGGGGCGGCGCGCCGCCA‑CACAGCCCCCGGGAAGTAAGTTggggaga                                                                                >  1:8950238/1‑147 (MQ=255)
                                                                         caATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑CCCGC‑GCC‑CGTGGA‑AAGGTGCGGGTAGGGGCGCCCACA‑CACATCCAGCGGGAAATAAATTTGgaccac                                                                               >  2:10559234/1‑151 (MQ=255)
                                                                          aaTGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑CGCCC‑GCC‑GTTGCC‑TAGGAGGGGAGCGGCGCGGCGGCA‑CCCAGCCCGCGGAAATTAAGTTGGggcgagg                                                                              >  2:5303636/1‑149 (MQ=255)
                                                                           aTGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCCC‑TCC‑CGTGGG‑GAGGCGCGGGGGGGCGCGCCGACG‑CACTGCCCGCGGGAATTCAGGTGGgacgacca                                                                             >  2:3248727/1‑149 (MQ=255)
                                                                               gCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGGCCG‑CCCCC‑ACC‑CTTGGC‑ACGGGGCCGCTCGGCGCGCCCCCA‑CACATGCAGCGGGAAATAAGGTGGGGCGACggcggc                                                                         >  2:2959444/1‑151 (MQ=255)
                                                                                  accacccaagaaaAACCACCGGTTGGCCTATCGCCCCGCCTCCTGCCCCAGCCCAGCGCCCGTCCCCGCGCCGC‑CCCGC‑TCC‑GTGGCA‑TCGGGGCTCAGCGCCGCCCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCAcc                                                                      <  2:6228734/145‑1 (MQ=255)
                                                                                        caagcaaAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑CCCCC‑GCC‑CTGGCA‑GATGCGCGGATCGGGGCGCCGCCTCCAATGCC‑GCCGCAAGTCAGTTGGGGCGAAGACGGccccgccccg                                                                >  2:7473930/1‑151 (MQ=255)
                                                                                            caaAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCCTCGGCCGGTCGCGCGCCGGCCCCGT‑GCG‑GTTGC‑‑TAGGTGCGGATCGGCGCGCCGACT‑CACAGGCCGCGGGAATTGAGGTGGGTCGCCCGCGGGACCGCGGCGCTgg                                                            >  2:5687321/1‑151 (MQ=255)
                                                                                                 tCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑CCCGC‑GCC‑GGTGCA‑AAGGAGCGGAGCGGCGCCCCCGCG‑CAAAGACCCCCGCAAATCACTTTGGTCGACGACGGCAACGCCGCCCGGGgccca                                                       >  2:2469979/1‑148 (MQ=255)
                                                                                                   aaaGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGGCGG‑CCCGC‑GCC‑CTTGGC‑TAGGAGCGGGTCGGGGCGCCGCCG‑CACAGCCCGCGGAAATTACGTTGGGGCGGAGACGGCGCCCCCGCCGCGGgcgcggg                                                     >  2:3038509/1‑148 (MQ=255)
                                                                                                   aaaGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑CCCCC‑TCC‑GTTGCA‑AAGGAGCGGATCGGCGCGGCCACA‑CACAGCCCGCGGAAATTCAGTTGGGTCGACGAAGGGACCGCCGCGGGGGGCGCTgg                                                     >  2:10698557/1‑150 (MQ=255)
                                                                                                          tGCCGATGGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑CGCGCGCCC‑CTTGGT‑TTGG‑GCGGATCGGGGCGCCCACG‑CACGGGCAGCGGGGATTCTGTTGGGGCGGCGACGGCACCGGCGCGCGGGGGGCGGCggggggg                                              >  2:7662346/1‑147 (MQ=255)
                                                                                                           gCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCCC‑GGC‑GGTGCC‑TAGGCGCCGATAGGCGCGCCCAAA‑CACAGCCCGCGGGCAATATCGTGGGGCGCGGACGGCAACCCCCCGCGGGGGGCAGGGGGCTGGc                                             >  2:2336706/1‑151 (MQ=255)
                                                                                                            ccGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGGCGG‑CCCCC‑GGC‑GGTGGA‑TAGGTTCGGATGGGGGCGGCGCCA‑CACAGGCCGCGGAAATACAAGTGGGGCGACGAGGGGACCCCCGCGctgggggctggggggaggcg                                            >  2:7524689/1‑145 (MQ=255)
                                                                                                            ccGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCCG‑CCCGC‑GCC‑GGTGGA‑AAGGGGAGGAACGGGGGCCCGCCC‑CACGGCCAGCGGGCAGTGCGGGGGGTCGACGACGGCACCCCCGCGCGGGGCGCGGCgggcgggcg                                            >  2:7524583/1‑150 (MQ=255)
                                                                                                                  gCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCGG‑CCCCC‑CCC‑GTTGCA‑GATGAGCGGAGCGGCGCGCGGCCT‑CACCGGCACCAGAAATAAAATTGGGGAGACGACGGCCCCCCCGCGCGGGGGGCTGCGGGGTGGCcggcggg                                      >  2:324204/1‑150 (MQ=255)
                                                                                                                     gAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGGGCCCG‑GCCGC‑GCC‑CTAGAC‑AATGAGCGGCAGGGCCCGGCCCCC‑CACAGCCAGCGGGAAATAAGGTGGGGCCACGAGGGCACCCCCCCCCGGGGGGCTGGGGGCGGGGCCGGGGCagc                                   >  2:2307795/1‑149 (MQ=255)
                                                                                                                         cTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCCG‑CCCCC‑GCC‑CGTGCA‑TAGGGGCGGATCGGCGCGCCGCAT‑CAAAGCCCACGGGAATTAAGTTGGGGGGTCGGCGGGCCCCCCCCGCGGGGCGCGGGGGGGAGGGCCGAGGccaccccc                               >  2:5970671/1‑144 (MQ=255)
                                                                                                                          tCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑GCCCC‑GCC‑CGTGGA‑TATGTGCGGGTGGGGGCGCCGCCG‑CACGTGCAGCGGTAAATAACTTTGGGCGGCGAAGGCACCCCCCCGCCGGGCGCGGGGGGCGGGGCGGAGGGAACCACCg                              >  2:10508583/1‑151 (MQ=255)
                                                                                                                                 ccAGAGCATCGGCCGGTCGCGCGCCGG‑CCCCC‑TCC‑GGTGCC‑AAGGAGCGGGTCCGGGCCCCCCCA‑CACCGCCCCCCGAAAATCAGTGGGGGCGACCTCGGGAACGCCCCGCGGGGCGCGGCGGGGTGGCCCGGGGCCACCCGCGGGAAGCt                       >  2:7214140/1‑151 (MQ=255)
                                                                                                                                  cAGAGCAGCGGCCGCTCGCGCGCCGG‑CCCGC‑GCC‑GTGTCT‑TAGGTGGGTAGCGGCGCCCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTg                      <  1:8810883/151‑1 (MQ=255)
                                                                                                                                   tcagCTTCGGCCGGTCGCCCGCCGC‑CCCTC‑GCT‑GTGGAC‑GTGGTGCGGTGCGGCGCCCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGCCGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGt                     <  2:7420197/149‑1 (MQ=255)
                                                                                                                                       caccgcccGGCCGCGCCCCGG‑CCCGC‑TCG‑GTTCAA‑ATGTCGGGGAGGGCCGCCCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGc                 <  1:7202801/145‑1 (MQ=255)
                                                                                                                                        cccggcggGCCGCGCGCCGC‑CCCGC‑TCG‑TTTTCT‑TGGGTGGGGCCCCCCCCCCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGcc                <  1:40332/149‑1 (MQ=255)
                                                                                                                                         ccggccggcCGCGCCCCGC‑CCCGC‑‑CC‑GTTCCATTCGGCGCGGCGCGCCCCCCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCg               <  1:2356698/150‑1 (MQ=255)
                                                                                                                                          cggcggGTCGCGCGCCGG‑CCCGC‑CCG‑GTTGCA‑TCGGTGCGGCTCGGCCGCCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCgg              <  2:5348224/151‑1 (MQ=255)
                                                                                                                                                ggcgcgcgCCGC‑CCCGC‑GCC‑GTTGAC‑GAGGCGCGGAGCGGCCCCCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTc        <  1:9907257/149‑1 (MQ=255)
                                                                                                                                                 tCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGGCGCGCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTcc       >  2:2491787/1‑151 (MQ=255)
                                                                                                                                                    cgcgcCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGGCGCGCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGc    >  2:1521889/1‑151 (MQ=255)
                                                                                                                                                     gcgcCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGGCGCGCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCa   >  2:6653856/1‑151 (MQ=255)
                                                                                                                                                      cgcCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGGCGCGCCGACT‑CACTGCCCGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCaa  >  1:7625556/1‑151 (MQ=255)
                                                                                                                                                      cgcCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGGCGCGCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATGTCCTGCaa  >  1:7626163/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                           
GGGCGGACAATCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCAGAGCATCGGCCGGTCGCGCGCCGG‑CCCGC‑TCC‑GTTGCA‑TAGGAGCGGATCGGCGCGCCGACT‑CACTGCCAGCGGAAATTCAGTTGGGACGACGACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAA  >  NC_008463/4616289‑4616589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑