Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_008463 | 3,150,987 | Δ1 bp | intergenic (‑192/+24) | pvcA ← / ← PA14_RS14420 | paerucumarin biosynthesis protein PvcA/asparaginase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 3,150,985 | 0 | C | . | 99.8% | 2033.9 / ‑3.4 | 411 | intergenic (‑190/+26) | pvcA/PA14_RS14420 | paerucumarin biosynthesis protein PvcA/asparaginase |
Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (224/186); minor base T (1/0); total (225/186) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 425 total aligned reads displayed.
GGCAGCGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGCCCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCATTCCACCA > NC_008463/3150835‑3151131 | ggCAGCGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGc > 2:10997336/1‑151 (MQ=255) gCGGAAGGCGCCATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGccgcc < 2:3723000/151‑4 (MQ=255) ggAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCcgg > 2:1286275/1‑151 (MQ=255) aGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCcggcgg > 2:6321980/1‑151 (MQ=255) aGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCcggcgg < 1:3990419/151‑1 (MQ=255) cgtcATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACCGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCggcgggcg > 1:8751066/4‑151 (MQ=255) cGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCggcgggcg > 1:8523947/1‑151 (MQ=255) gACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGGTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGgcgggcgg > 2:2773325/1‑151 (MQ=255) cATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGcc < 1:8985462/151‑1 (MQ=255) cATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGcc < 1:8037551/151‑1 (MQ=255) cATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGcc < 1:5181513/151‑1 (MQ=255) ccTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGTAAACACTGTTCGCTGAAGATTTACGATGGGCGCCGGGCAGGGGCGGGCCGCCGGCGTTGTCGCGTATCGGGGGGAGCTCGGAAGTAAGCGG‑CCGCCGGCGGGCGGCCGCa < 1:1017516/151‑1 (MQ=255) tgtgGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAgg > 1:5047003/1‑151 (MQ=255) gtgGACTCGCCGCCGGGGGATAAACCGGGGTAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAggg < 2:6533832/151‑1 (MQ=255) cTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAGGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTc > 2:827587/1‑151 (MQ=255) tCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCa > 2:9698250/1‑151 (MQ=255) cgccgcCGGGGGATAAACCGGGGACGGCCGGAAACACGGTTCGCTGATGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGAATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAg < 2:8528297/151‑1 (MQ=255) gccgccGGGGGATAAACCGGGGCAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGt > 1:7742027/1‑151 (MQ=255) gccgccGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGt > 1:2858143/1‑151 (MQ=255) gccgccGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGt > 1:10383181/1‑151 (MQ=255) ccgccgGGGGATAAACCGGGGATGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTc < 2:8937721/151‑1 (MQ=255) ccgccgGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTc < 2:7067556/151‑1 (MQ=255) gccgGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCgg > 1:3672613/1‑151 (MQ=255) ccgGGGGATCAACGGGGGAAGGCCGGAAACACGGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTGGGAATGACGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGc < 1:5824099/151‑1 (MQ=255) gggggATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGt > 1:9268011/1‑151 (MQ=255) gATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTtctc < 2:10537432/151‑1 (MQ=255) gATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTtctc < 1:4418006/151‑1 (MQ=255) gATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTtctc > 2:2396248/1‑151 (MQ=255) aaaCCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTcgcc > 2:4169600/1‑151 (MQ=255) aaaCCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTcgcc > 2:7194452/1‑151 (MQ=255) aaaCCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCGTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGCCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTACTcgcc < 1:2300132/151‑1 (MQ=255) aaCCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTcgccg > 1:2178477/1‑151 (MQ=255) aaCCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTcgccg > 1:1317294/1‑151 (MQ=255) aCCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTcgccgc > 1:9359989/1‑151 (MQ=255) ccGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGca < 2:1654868/151‑1 (MQ=255) cGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGTCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGcac > 1:2667208/1‑151 (MQ=255) cGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGcac > 2:3760967/1‑151 (MQ=255) gggAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAg > 2:3030750/1‑151 (MQ=255) gCCGGAAACACGGGTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAg < 2:9555432/151‑1 (MQ=255) cctgAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTGGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAgg < 2:518357/148‑1 (MQ=255) cGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAggg > 2:766601/1‑151 (MQ=255) gtaaaCACTGTTCGCTGAAGCTTGACGTTGGGCGCCGGGCACGGGCGGGCCGCGGGGGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGc < 2:8577459/149‑1 (MQ=255) ggAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGc > 1:11092554/1‑151 (MQ=255) ggAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGc < 1:868353/151‑1 (MQ=255) ggAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGc > 2:1936888/1‑151 (MQ=255) gAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCg < 2:7831810/151‑1 (MQ=255) aaCACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGaa > 1:9249826/1‑151 (MQ=255) cacTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAAcc > 1:8389721/1‑151 (MQ=255) acTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCa > 2:5592951/1‑151 (MQ=255) acTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCa < 1:4306777/151‑1 (MQ=255) cGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGTAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTg > 1:3456151/1‑151 (MQ=255) cGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTg > 2:7941223/1‑151 (MQ=255) cGCTGAAGCTTGACGATGCGCGCCGGGCACGTGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGACCGCGGAAGGAAGCGG‑CAGCCGGAGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGtgg > 1:6452654/1‑149 (MQ=255) gCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTgc > 1:295933/1‑151 (MQ=255) gCTGAAGCTTGACGAGGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGATGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTgc < 1:5640517/151‑1 (MQ=255) cTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGACCCAGCGTTgcg > 2:1149374/1‑151 (MQ=255) cTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTgcg < 2:1801341/151‑1 (MQ=255) gAAGCTTGACGCTGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGGGGATCGCGGGGAGCTCGGCAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGGCAGTCGGCGTGCTCGCCGCACAGGTCGGGGGCGAACCAGCGTTGCGCt > 2:5925275/1‑151 (MQ=255) aaGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGGCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTgcgcgt > 1:1699887/1‑149 (MQ=255) aGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTtc > 1:8129536/1‑151 (MQ=255) aGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTtc < 1:6847424/151‑1 (MQ=255) cTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTtcgt < 2:10100382/151‑1 (MQ=255) cTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTtcgt > 1:6210106/1‑151 (MQ=255) gACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTcgc > 1:4729714/1‑151 (MQ=255) aCGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTcgcg > 1:7181202/1‑151 (MQ=255) cGAAGGGCCCCGGGGACGGGCGGGCCGCCGGCGTTGACGCGTATCGCGGGGAGCACGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGCGGGCGTACCAGCGTTGCGCTTCGTCGCGt < 2:8659274/151‑1 (MQ=255) gggCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGa < 2:3504463/151‑1 (MQ=255) cgcCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGc < 1:7084774/151‑1 (MQ=255) gcCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGcc < 2:6784736/151‑1 (MQ=255) gcCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGcc > 1:1778125/1‑151 (MQ=255) ccGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCg < 1:3560611/151‑1 (MQ=255) ccGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCg > 1:4924232/1‑151 (MQ=255) ggCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGgcg < 2:756118/151‑1 (MQ=255) gCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGgcgc > 2:4857719/1‑151 (MQ=255) gggcgggcCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAg < 2:927366/151‑1 (MQ=255) gggcgggcCGCCGGCGTTGTCGCGGATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAg > 1:1423878/1‑151 (MQ=255) cgggcCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAg > 2:6967228/1‑151 (MQ=255) ccgccgGCGTGGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTACTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCg > 1:10797496/1‑151 (MQ=255) gccgGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGGTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGaa < 2:2201790/151‑1 (MQ=255) ccgGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAag > 2:5264347/1‑151 (MQ=255) ccgGCGTTGTCGCGTATCGCGGGGAGCACGGAAGGAAGCGG‑CCGACGTCTGGCGGCCGCAGGGCGGACAGTCGGCGTACTCTCCGCACAGGTCGAGGGCGAACCAGCGATGCGCTTCGTCGCGTCCGAGCCCGGCGCCGAGCAGGCCCAag > 2:2896082/1‑151 (MQ=255) cgGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAaga > 1:10311258/1‑151 (MQ=255) cGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCCGGCCGAAGAGCt < 2:4438225/151‑1 (MQ=255) ttGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTg > 1:3169228/1‑151 (MQ=255) tCGCGTATCGCGGGGAGCTCGGAAGGACGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTGCTCGCCGCACAGGTCGCGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGccc < 2:8904583/151‑1 (MQ=255) tCGCGTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGccc < 2:4978832/151‑1 (MQ=255) cgcgTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCa < 2:4576315/151‑1 (MQ=255) cgcgTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCa < 1:7569447/151‑1 (MQ=255) cgcgTATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCa < 1:7879591/151‑1 (MQ=255) tATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGgc > 1:3308011/1‑151 (MQ=255) tATCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGgc > 1:9907172/1‑151 (MQ=255) tCGCGGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGgccg < 1:7368733/151‑1 (MQ=255) ggggggAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCGTCGTCGCGGCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGgccgcc > 2:212341/3‑151 (MQ=255) gcgGGGAGCGCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCCCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGATGGCGAACCACCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGgccccc > 2:8374351/1‑151 (MQ=255) cgGGGAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCt > 1:5442315/1‑151 (MQ=255) ggggAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTc < 1:6544328/151‑1 (MQ=255) gAGCTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTcgcg < 1:10020373/151‑1 (MQ=255) cTCGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCgggg > 2:10692303/1‑150 (MQ=255) cGGAAGGAAGCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTAGGCGTTCTCGCCTCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGACCAGGGCCGCCTCGCGGGTCa > 1:5479332/1‑151 (MQ=255) agCGG‑CCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCATTccacca > 1:10918502/1‑151 (MQ=255) | GGCAGCGGAAGGCGACATCCTGTGGACTCGCCGCCGGGGGATAAACCGGGGAAGGCCGGAAACACTGTTCGCTGAAGCTTGACGATGGGCGCCGGGCACGGGCGGGCCGCCGGCGTTGTCGCGTATCGCGGGGAGCTCGGAAGGAAGCGGCCCGCCGGCGGGCGGCCGCAGGGCGGTCAGTCGGCGTTCTCGCCGCACAGGTCGAGGGCGAACCAGCGTTGCGCTTCGTCGCGTCCGAGGCCGGCGCCGAGCAGGCCGAAGAGCTTGCCCAGGGCCGCCTCGCGGGTCATTCCACCA > NC_008463/3150835‑3151131 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |