| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,028,119 | Δ1 bp | intergenic (‑41/+96) | PA14_RS22975 ← / ← PA14_RS22980 | Nramp family divalent metal transporter/ribbon‑helix‑helix domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,028,117 | 0 | C | . | 99.7% | 2921.1 / 3.8 | 594 | intergenic (‑39/+98) | PA14_RS22975/PA14_RS22980 | Nramp family divalent metal transporter/ribbon‑helix‑helix domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (229/362); minor base G (1/1); total (231/363) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 631 total aligned reads displayed.
CGATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGCCCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCGGGTGGGTTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTCGC > NC_008463/5027967‑5028264 | gATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGTCCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAGCGGCGCGGTGGcc > 2:10891704/1‑151 (MQ=255) gATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGcc < 2:4725585/151‑1 (MQ=255) gATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGcc > 2:7708703/1‑151 (MQ=255) gATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGcc > 1:8732623/1‑151 (MQ=255) tGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGCGGGACAGAACGGCGCGGTGGccgg > 2:1329579/1‑149 (MQ=255) tGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccgt > 1:9687581/1‑149 (MQ=255) ggCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccgtg < 1:5604405/151‑4 (MQ=255) ggCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccgtg < 1:9836982/151‑4 (MQ=255) gCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGccgtgg > 1:4222592/1‑147 (MQ=255) cGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCgtggt > 1:4734804/1‑151 (MQ=255) cGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCgtggt < 1:8287188/151‑1 (MQ=255) tGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTggg < 2:6976996/151‑1 (MQ=255) ggCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGc < 1:7101465/151‑1 (MQ=255) cccAGGTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAg < 2:10618838/151‑1 (MQ=255) ccAGTTGCCGGGGTCCATGTAGCCGACCGAGACCCGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCTCGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAgg < 2:8494648/151‑1 (MQ=255) cAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAggg < 1:7378310/151‑1 (MQ=255) cAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAggg < 1:5483920/151‑1 (MQ=255) tagCCGGGGTCCAAGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGt < 2:8198371/149‑1 (MQ=255) tGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTa < 1:10002850/151‑1 (MQ=255) ccGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTAtt < 2:6510112/151‑1 (MQ=255) ggggTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTc < 1:3654561/151‑1 (MQ=255) ggggTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTc > 2:1940700/1‑151 (MQ=255) gggTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCa < 1:5014548/151‑1 (MQ=255) ggTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCAc > 2:9511399/1‑151 (MQ=255) ccATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAg < 2:6397980/151‑1 (MQ=255) ccATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAg > 1:1473900/1‑151 (MQ=255) cATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAgg < 2:4635098/151‑1 (MQ=255) tAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGAc < 1:6552219/151‑1 (MQ=255) aGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACg < 2:5045684/151‑1 (MQ=255) aGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACg < 2:538827/151‑1 (MQ=255) gaccgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCgg > 2:2392018/1‑151 (MQ=255) accgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGa < 1:9129383/151‑1 (MQ=255) cgaGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATc > 2:401630/1‑151 (MQ=255) agaCCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCgg < 1:6325275/151‑1 (MQ=255) aCCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCgggg < 2:3562076/151‑1 (MQ=255) agcagGCCGGGGCCGCCGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTCGCTGACCGCCGAGCGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGggagg < 1:7514773/151‑1 (MQ=255) cagGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGaa < 1:4542793/151‑1 (MQ=255) agGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAg > 2:4789848/1‑151 (MQ=255) agGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAg < 1:237249/151‑1 (MQ=255) agGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAg < 2:10251695/151‑1 (MQ=255) agGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAg < 1:1435242/151‑1 (MQ=255) ggCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGt < 1:1800/151‑1 (MQ=255) ggCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGt < 2:157622/151‑1 (MQ=255) gCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTg < 1:2643688/151‑1 (MQ=255) cGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCg < 1:3464349/151‑1 (MQ=255) cGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCg > 2:57933/1‑151 (MQ=255) ggggCCGACGAACCGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGa < 1:1058331/151‑1 (MQ=255) gggCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGAc < 2:8912596/151‑1 (MQ=255) ggCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGAcc > 1:894173/1‑151 (MQ=255) acgaACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCt < 2:1695237/151‑1 (MQ=255) cgtaCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCTCCACGCTGTGGCTGACCGCCGAGGTAAAGAACGGCTCGG‑AGTCCGTGGTGGGCAGGGCGTATTTCACGAGGCGAAGCCGGATCGGGGAGGACGTGAGACCAGCCTa > 1:6959008/4‑151 (MQ=255) aaCAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTaaa < 1:1255576/151‑1 (MQ=255) cAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACg < 1:7897818/151‑1 (MQ=255) cgcCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCTCGCTGTGGCTGACCGCCGAGGGACAGCACGGCGCGGTGG‑CCGTGGTGGGAAGGGAGTATTTCACGCGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGttt < 2:2178257/151‑1 (MQ=255) cgcCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGttt < 2:9152138/151‑1 (MQ=255) ccAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCa < 1:5935382/151‑1 (MQ=255) cTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCAcccc < 1:669070/151‑1 (MQ=255) cTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGAGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCAcccc < 1:5247597/151‑1 (MQ=255) cgcAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtc < 1:440236/151‑3 (MQ=255) cgcAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtc > 1:5711938/1‑149 (MQ=255) cAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGGGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgc > 2:1993921/1‑147 (MQ=255) gcggcgAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgcgt < 2:7315906/151‑7 (MQ=255) cggcgAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCggtcgcgtc > 1:685446/1‑144 (MQ=255) gCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctc < 1:3825178/151‑1 (MQ=255) cGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctcc > 2:3128330/1‑151 (MQ=255) cGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctcc < 1:2751040/151‑1 (MQ=255) cGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctcc < 1:9395741/151‑1 (MQ=255) gTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctccc > 2:7102965/1‑151 (MQ=255) gTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTtccctccc < 2:837897/151‑1 (MQ=255) ggccggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTccctcccctc < 2:2551003/151‑1 (MQ=255) ggccggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTccctcccctc > 2:8134187/1‑151 (MQ=255) gccggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCa > 2:5213619/1‑151 (MQ=255) cggcACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAgg > 1:2179594/1‑151 (MQ=255) ccGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTgg < 2:4516698/151‑1 (MQ=255) ccGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTgg < 2:2775271/151‑1 (MQ=255) gCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGgc < 2:4201349/151‑1 (MQ=255) cACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGgcgc < 2:7225065/151‑1 (MQ=255) cACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGgcgc > 2:5956886/1‑151 (MQ=255) cACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCGGGgcgc > 2:9441818/1‑151 (MQ=255) aCGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGGGGTGGGGCGGGAGAATGTCGCGAGGCGAGGCAGGATCGGGGAGGTAGTGCGACCAGCCTATACGTTTCA‑CGCATGTCGCGTCTTCCCTCCCCTCGGGCCTGGgcgcg > 2:10753115/1‑151 (MQ=255) gCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGGGGAGGGCAGGGAGTATTTCAAGAGGCGACGCAGGATCGGGGAGGTAGTGCGACCAGCGTAAAAGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCGGGgcgcggt > 2:7563017/1‑149 (MQ=255) tgGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGcc < 1:10982319/151‑1 (MQ=255) tgGCTGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGcc < 2:3433065/151‑1 (MQ=255) tGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGTCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGAcc > 1:10339765/1‑151 (MQ=255) tGACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGAcc > 2:5612511/1‑151 (MQ=255) gACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCa > 2:6597386/1‑151 (MQ=255) gACCGCCGAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCa < 1:9489873/151‑1 (MQ=255) ccgAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTc > 2:9723656/1‑151 (MQ=255) cgAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCCCGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAATCGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCa < 2:10012399/151‑1 (MQ=255) cgAGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCa < 1:3037594/151‑1 (MQ=255) aGGGACAGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGc > 2:1177974/1‑151 (MQ=255) cAGAACGGCGCGGTGG‑CCGTGGTGGGCCGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGc > 2:3844552/1‑151 (MQ=255) aGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCg > 2:6148729/1‑151 (MQ=255) aGAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCg < 2:4887077/151‑1 (MQ=255) gAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGa > 2:5716477/1‑151 (MQ=255) gAACGGCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGa < 1:7728821/151‑1 (MQ=255) ggCGCGGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCtt > 1:1626437/1‑151 (MQ=255) gcgGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTtctc < 2:7940556/151‑1 (MQ=255) gcgGTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTtctc < 1:8571498/151‑1 (MQ=255) ggTGG‑CCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCC‑GGTCGCGTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTcgc < 1:8134187/151‑1 (MQ=255) | CGATGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCGACCGAGACCAGCAGGCCGGGGCCGACGAACAGCGCCAGCTTGCGCAGCGGCGAGGCGTCGGCCGGCACCGCCACGCTGTGGCTGACCGCCGAGGGACAGAACGGCGCGGTGGCCCGTGGTGGGCAGGGAGTATTTCACGAGGCGACGCCGGATCGGGGAGGAAGTGCGACCAGCCTAAACGTTTCACCCCGGGTGGGTTCTTCCCTCCCCTCAGGCCTGGGCGCGCTGGCCGACCAGGCTCAGCTCGGCGACCTTCTCGC > NC_008463/5027967‑5028264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |